RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 DYNC1I2Q13409 638 aaKnown RBP5.35□□□□□ -1.55
PCF11-205ENST00000530906 CAMK2GQ13555 558 aaPredicted RBP5.35□□□□□ -1.55
PCF11-205ENST00000530906 RUNX3Q13761 415 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 DAG1Q14118 895 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 CBX2Q14781 532 aaPredicted RBP5.35□□□□□ -1.55
PCF11-205ENST00000530906 NRF1Q16656 503 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 CYP2A13Q16696 494 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 ZXDCQ2QGD7 858 aaPredicted RBP5.35□□□□□ -1.55
PCF11-205ENST00000530906 ITPRIPL2Q3MIP1 535 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 HABP4Q5JVS0 413 aaKnown RBP5.35□□□□□ -1.55
PCF11-205ENST00000530906 C6orf52Q5T4I8 152 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 CPZQ66K79 652 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 ABRAXAS1Q6UWZ7 409 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 MBOAT1Q6ZNC8 495 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 USP51Q70EK9 711 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 GPR155Q7Z3F1 870 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 AMIGO2Q86SJ2 522 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 LRRTM4Q86VH4 590 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 AMZ2Q86W34 360 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 C12orf40Q86WS4 652 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 HIPK1Q86Z02 1210 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 TRAPPC5Q8IUR0 188 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 EPHX4Q8IUS5 362 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 MSRB3Q8IXL7 192 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 SYTL1Q8IYJ3 562 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 C7orf61Q8IZ16 206 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 GALNT15Q8N3T1 639 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 TRIML2Q8N7C3 387 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 TSPAN14Q8NG11 270 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 PJA1Q8NG27 643 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 OR7G3Q8NG95 312 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 OR10A6Q8NH74 314 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 GOT1L1Q8NHS2 421 aaPredicted RBP5.35□□□□□ -1.55
PCF11-205ENST00000530906 STK35Q8TDR2 534 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 ADAMTS16Q8TE57 1224 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 ZNF480Q8WV37 535 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 CHTF18Q8WVB6 975 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 SLC5A11Q8WWX8 675 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 ASB12Q8WXK4 309 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 SORCS1Q8WY21 1168 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 NCLNQ969V3 563 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 FAM162AQ96A26 154 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 ARRDC3Q96B67 414 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 ELSPBP1Q96BH3 223 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 COQ8BQ96D53 544 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 RSPRY1Q96DX4 576 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 NRBF2Q96F24 287 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 SLC47A1Q96FL8 570 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 CNDP2Q96KP4 475 aaKnown RBP5.35□□□□□ -1.55
PCF11-205ENST00000530906 APOLD1Q96LR9 279 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 QRFPRQ96P65 431 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 LRRC3BQ96PB8 259 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 HBEGFQ99075 208 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 PKP4Q99569 1192 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 SLC29A1Q99808 456 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 RBM4BQ9BQ04 359 aaKnown RBP5.35□□□□□ -1.55
PCF11-205ENST00000530906 WRAP53Q9BUR4 548 aaKnown RBP5.35□□□□□ -1.55
PCF11-205ENST00000530906 RBM4Q9BWF3 364 aaKnown RBP5.35□□□□□ -1.55
PCF11-205ENST00000530906 ASPSCR1Q9BZE9 553 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 RSPH9Q9H1X1 276 aaPredicted RBP5.35□□□□□ -1.55
PCF11-205ENST00000530906 OR2AG1Q9H205 316 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 OR52A5Q9H2C5 316 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 SEMA6AQ9H2E6 1030 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 SGK2Q9HBY8 427 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 MYNNQ9NPC7 610 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 PHPT1Q9NRX4 125 aaPredicted RBP5.35□□□□□ -1.55
PCF11-205ENST00000530906 SLC25A37Q9NYZ2 338 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 UBAP1Q9NZ09 502 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 AHSPQ9NZD4 102 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 PTTG2Q9NZH5 202 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 SLAMF8Q9P0V8 285 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 ZNF282Q9UDV7 671 aaPredicted RBP5.35□□□□□ -1.55
PCF11-205ENST00000530906 ZNHIT2Q9UHR6 403 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 ATP6V1HQ9UI12 483 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 C3orf18Q9UK00 162 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 PCOLCE2Q9UKZ9 415 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 BLOC1S6Q9UL45 172 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 OAZ3Q9UMX2 235 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 SCML1Q9UN30 329 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 ZNF451Q9Y4E5 1061 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 PCDHB14Q9Y5E9 798 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 ORC6Q9Y5N6 252 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 FADS3Q9Y5Q0 445 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 C2orf16Q68DN1 1984 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 BPTFQ12830 3046 aa5.34□□□□□ -1.55
PCF11-205ENST00000530906 COL4A3Q01955 1670 aa5.34□□□□□ -1.55
PCF11-205ENST00000530906 TMEM202A6NGA9 273 aa5.34□□□□□ -1.55
PCF11-205ENST00000530906 SAC3D1A6NKF1 404 aa5.34□□□□□ -1.55
PCF11-205ENST00000530906 ENO4A6NNW6 628 aa5.34□□□□□ -1.55
PCF11-205ENST00000530906 MAGEB17A8MXT2 336 aa5.34□□□□□ -1.55
PCF11-205ENST00000530906 E7EQ34 232 aa5.34□□□□□ -1.55
PCF11-205ENST00000530906 CLIC1O00299 241 aa5.34□□□□□ -1.55
PCF11-205ENST00000530906 EI24O14681 340 aa5.34□□□□□ -1.55
PCF11-205ENST00000530906 FPGTO14772 594 aa5.34□□□□□ -1.55
PCF11-205ENST00000530906 KMOO15229 486 aa5.34□□□□□ -1.55
PCF11-205ENST00000530906 PRAMEF4O60810 478 aa5.34□□□□□ -1.55
PCF11-205ENST00000530906 SCN2BO60939 215 aa5.34□□□□□ -1.55
PCF11-205ENST00000530906 MTX2O75431 263 aa5.34□□□□□ -1.55
PCF11-205ENST00000530906 POP7O75817 140 aaKnown RBP5.34□□□□□ -1.55
PCF11-205ENST00000530906 KAT7O95251 611 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms