RNA–Protein interactions for RNA: ENST00000529224.1

SSH3-206, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-206ENST00000529224 MTRF1LQ9UGC7 380 aaKnown RBP12.36□□□□□ -0.43
SSH3-206ENST00000529224 GTF3C1Q12789 2109 aa12.35□□□□□ -0.43
SSH3-206ENST00000529224 MYO7BQ6PIF6 2116 aa12.35□□□□□ -0.43
SSH3-206ENST00000529224 ZNF860A6NHJ4 632 aa12.35□□□□□ -0.43
SSH3-206ENST00000529224 GALR3O60755 368 aaPredicted RBP12.35□□□□□ -0.43
SSH3-206ENST00000529224 FAM155BO75949 473 aa12.35□□□□□ -0.43
SSH3-206ENST00000529224 S100BP04271 92 aaPredicted RBP12.35□□□□□ -0.43
SSH3-206ENST00000529224 SERPINA6P08185 405 aa12.35□□□□□ -0.43
SSH3-206ENST00000529224 ZNF888P0CJ79 500 aaPredicted RBP12.35□□□□□ -0.43
SSH3-206ENST00000529224 PHBP35232 272 aa12.35□□□□□ -0.43
SSH3-206ENST00000529224 GGT5P36269 586 aa12.35□□□□□ -0.43
SSH3-206ENST00000529224 GDF5P43026 501 aa12.35□□□□□ -0.43
SSH3-206ENST00000529224 AGTR2P50052 363 aa12.35□□□□□ -0.43
SSH3-206ENST00000529224 MFAP5Q13361 173 aa12.35□□□□□ -0.43
SSH3-206ENST00000529224 PCOLCEQ15113 449 aa12.35□□□□□ -0.43
SSH3-206ENST00000529224 OR4D1Q15615 310 aa12.35□□□□□ -0.43
SSH3-206ENST00000529224 C18orf21Q32NC0 220 aaPredicted RBP12.35□□□□□ -0.43
SSH3-206ENST00000529224 DEFB134Q4QY38 66 aa12.35□□□□□ -0.43
SSH3-206ENST00000529224 SLCO4C1Q6ZQN7 724 aa12.35□□□□□ -0.43
SSH3-206ENST00000529224 CPEB2Q7Z5Q1 589 aaKnown RBP12.35□□□□□ -0.43
SSH3-206ENST00000529224 CCDC91Q7Z6B0 441 aa12.35□□□□□ -0.43
SSH3-206ENST00000529224 KRT78Q8N1N4 520 aa12.35□□□□□ -0.43
SSH3-206ENST00000529224 ANKRD53Q8N9V6 530 aa12.35□□□□□ -0.43
SSH3-206ENST00000529224 PDPRQ8NCN5 879 aa12.35□□□□□ -0.43
SSH3-206ENST00000529224 PEX11GQ96HA9 241 aa12.35□□□□□ -0.43
SSH3-206ENST00000529224 TUBB6Q9BUF5 446 aa12.35□□□□□ -0.43
SSH3-206ENST00000529224 SLC6A16Q9GZN6 736 aa12.35□□□□□ -0.43
SSH3-206ENST00000529224 PITHD1Q9GZP4 211 aaPredicted RBP12.35□□□□□ -0.43
SSH3-206ENST00000529224 TSPYL1Q9H0U9 437 aa12.35□□□□□ -0.43
SSH3-206ENST00000529224 CLK4Q9HAZ1 481 aaKnown RBP12.35□□□□□ -0.43
SSH3-206ENST00000529224 NMRAL1Q9HBL8 299 aa12.35□□□□□ -0.43
SSH3-206ENST00000529224 DNAJC11Q9NVH1 559 aa12.35□□□□□ -0.43
SSH3-206ENST00000529224 CD274Q9NZQ7 290 aa12.35□□□□□ -0.43
SSH3-206ENST00000529224 RNF112Q9ULX5 631 aa12.35□□□□□ -0.43
SSH3-206ENST00000529224 CTAGE15A4D2H0 777 aa12.34□□□□□ -0.43
SSH3-206ENST00000529224 CLGNO14967 610 aa12.34□□□□□ -0.43
SSH3-206ENST00000529224 TAPBPO15533 448 aa12.34□□□□□ -0.43
SSH3-206ENST00000529224 STK16O75716 305 aa12.34□□□□□ -0.43
SSH3-206ENST00000529224 WFS1O76024 890 aa12.34□□□□□ -0.43
SSH3-206ENST00000529224 UQCRHP07919 91 aa12.34□□□□□ -0.43
SSH3-206ENST00000529224 LTA4HP09960 611 aaKnown RBP12.34□□□□□ -0.43
SSH3-206ENST00000529224 CTAGE8P0CG41 777 aa12.34□□□□□ -0.43
SSH3-206ENST00000529224 SLC35E2BP0CK96 405 aa12.34□□□□□ -0.43
SSH3-206ENST00000529224 GSTM2P28161 218 aa12.34□□□□□ -0.43
SSH3-206ENST00000529224 HSPA7P48741 367 aa12.34□□□□□ -0.43
SSH3-206ENST00000529224 EFNA3P52797 238 aa12.34□□□□□ -0.43
SSH3-206ENST00000529224 STXBP1P61764 594 aaKnown RBP12.34□□□□□ -0.43
SSH3-206ENST00000529224 SLBPQ14493 270 aaKnown RBP eCLIP12.34□□□□□ -0.43
SSH3-206ENST00000529224 EFTUD2Q15029 972 aaKnown RBP eCLIP12.34□□□□□ -0.432e-6■■■□□ 17.4
SSH3-206ENST00000529224 HIST2H2BCQ6DN03 193 aa12.34□□□□□ -0.43
SSH3-206ENST00000529224 TMIGD1Q6UXZ0 262 aa12.34□□□□□ -0.43
SSH3-206ENST00000529224 LINC00696Q6ZRV3 163 aa12.34□□□□□ -0.43
SSH3-206ENST00000529224 LANCL3Q6ZV70 420 aa12.34□□□□□ -0.43
SSH3-206ENST00000529224 CMC1Q7Z7K0 106 aa12.34□□□□□ -0.43
SSH3-206ENST00000529224 CTAGE6Q86UF2 777 aa12.34□□□□□ -0.43
SSH3-206ENST00000529224 CUZD1Q86UP6 607 aa12.34□□□□□ -0.43
SSH3-206ENST00000529224 CTAGE4Q8IX94 777 aa12.34□□□□□ -0.43
SSH3-206ENST00000529224 SNX31Q8N9S9 440 aa12.34□□□□□ -0.43
SSH3-206ENST00000529224 PLPP5Q8NEB5 264 aa12.34□□□□□ -0.43
SSH3-206ENST00000529224 OR5T3Q8NGG3 340 aa12.34□□□□□ -0.43
SSH3-206ENST00000529224 DNAJB14Q8TBM8 379 aa12.34□□□□□ -0.43
SSH3-206ENST00000529224 STAG3L4Q8TBR4 150 aa12.34□□□□□ -0.43
SSH3-206ENST00000529224 BRIX1Q8TDN6 353 aaKnown RBP12.34□□□□□ -0.43
SSH3-206ENST00000529224 UTP15Q8TED0 518 aaKnown RBP12.34□□□□□ -0.43
SSH3-206ENST00000529224 CREB3L4Q8TEY5 395 aa12.34□□□□□ -0.43
SSH3-206ENST00000529224 TBC1D20Q96BZ9 403 aa12.34□□□□□ -0.43
SSH3-206ENST00000529224 SNRNP40Q96DI7 357 aaKnown RBP12.34□□□□□ -0.43
SSH3-206ENST00000529224 SEC16BQ96JE7 1060 aa12.34□□□□□ -0.43
SSH3-206ENST00000529224 IMMP1LQ96LU5 166 aa12.34□□□□□ -0.43
SSH3-206ENST00000529224 TMEM79Q9BSE2 394 aa12.34□□□□□ -0.43
SSH3-206ENST00000529224 EHD1Q9H4M9 534 aa12.34□□□□□ -0.43
SSH3-206ENST00000529224 PTGFRNQ9P2B2 879 aa12.34□□□□□ -0.43
SSH3-206ENST00000529224 PTBP2Q9UKA9 531 aaKnown RBP12.34□□□□□ -0.43
SSH3-206ENST00000529224 PCDHGA10Q9Y5H3 936 aa12.34□□□□□ -0.43
SSH3-206ENST00000529224 NOTCH2Q04721 2471 aa12.34□□□□□ -0.43
SSH3-206ENST00000529224 UNC79Q9P2D8 2635 aa12.34□□□□□ -0.43
SSH3-206ENST00000529224 PCNX1Q96RV3 2341 aa12.33□□□□□ -0.44
SSH3-206ENST00000529224 DYTNA2CJ06 578 aa12.33□□□□□ -0.44
SSH3-206ENST00000529224 CHST10O43529 356 aa12.33□□□□□ -0.44
SSH3-206ENST00000529224 SEMA7AO75326 666 aa12.33□□□□□ -0.44
SSH3-206ENST00000529224 SEC24DO94855 1032 aaPredicted RBP12.33□□□□□ -0.44
SSH3-206ENST00000529224 FHP07954 510 aa12.33□□□□□ -0.44
SSH3-206ENST00000529224 RNF224P0DH78 156 aa12.33□□□□□ -0.44
SSH3-206ENST00000529224 SMIM10L1P0DMW3 83 aa12.33□□□□□ -0.44
SSH3-206ENST00000529224 TFEBP19484 476 aa12.33□□□□□ -0.44
SSH3-206ENST00000529224 JAK1P23458 1154 aa12.33□□□□□ -0.44
SSH3-206ENST00000529224 HPDP32754 393 aaPredicted RBP12.33□□□□□ -0.44
SSH3-206ENST00000529224 SOX11P35716 441 aa12.33□□□□□ -0.44
SSH3-206ENST00000529224 HNF4AP41235 474 aa12.33□□□□□ -0.44
SSH3-206ENST00000529224 GLRBP48167 497 aa12.33□□□□□ -0.44
SSH3-206ENST00000529224 RHAGQ02094 409 aa12.33□□□□□ -0.44
SSH3-206ENST00000529224 ZNF169Q14929 603 aaPredicted RBP12.33□□□□□ -0.44
SSH3-206ENST00000529224 ABRAXAS2Q15018 415 aa12.33□□□□□ -0.44
SSH3-206ENST00000529224 TLR1Q15399 786 aa12.33□□□□□ -0.44
SSH3-206ENST00000529224 NSDHLQ15738 373 aa12.33□□□□□ -0.44
SSH3-206ENST00000529224 PDK4Q16654 411 aa12.33□□□□□ -0.44
SSH3-206ENST00000529224 GLE1Q53GS7 698 aaKnown RBP12.33□□□□□ -0.44
SSH3-206ENST00000529224 TOR1AIP1Q5JTV8 583 aa12.33□□□□□ -0.44
SSH3-206ENST00000529224 MROH9Q5TGP6 573 aa12.33□□□□□ -0.44
SSH3-206ENST00000529224 B3GNTL1Q67FW5 361 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms