RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 RHBDD2Q6NTF9 364 aa15.72■□□□□ 0.11
CAPN1-205ENST00000526954 RNF175Q8N4F7 328 aa15.72■□□□□ 0.11
CAPN1-205ENST00000526954 AFAP1L2Q8N4X5 818 aa15.72■□□□□ 0.11
CAPN1-205ENST00000526954 AGR3Q8TD06 166 aa15.72■□□□□ 0.11
CAPN1-205ENST00000526954 UTP15Q8TED0 518 aaKnown RBP15.72■□□□□ 0.11
CAPN1-205ENST00000526954 GAL3ST3Q96A11 431 aa15.72■□□□□ 0.11
CAPN1-205ENST00000526954 MS4A6EQ96DS6 147 aa15.72■□□□□ 0.11
CAPN1-205ENST00000526954 LRFN5Q96NI6 719 aa15.72■□□□□ 0.11
CAPN1-205ENST00000526954 SERPINI1Q99574 410 aa15.72■□□□□ 0.11
CAPN1-205ENST00000526954 CCT7Q99832 543 aa15.72■□□□□ 0.11
CAPN1-205ENST00000526954 NDC1Q9BTX1 674 aa15.72■□□□□ 0.11
CAPN1-205ENST00000526954 SPRY4Q9C004 299 aa15.72■□□□□ 0.11
CAPN1-205ENST00000526954 REXO4Q9GZR2 422 aaKnown RBP15.72■□□□□ 0.11
CAPN1-205ENST00000526954 TUBB1Q9H4B7 451 aa15.72■□□□□ 0.11
CAPN1-205ENST00000526954 KLHL31Q9H511 634 aa15.72■□□□□ 0.11
CAPN1-205ENST00000526954 SLCO1B3Q9NPD5 702 aa15.72■□□□□ 0.11
CAPN1-205ENST00000526954 CUTCQ9NTM9 273 aa15.72■□□□□ 0.11
CAPN1-205ENST00000526954 PNPOQ9NVS9 261 aa15.72■□□□□ 0.11
CAPN1-205ENST00000526954 MSRB2Q9Y3D2 182 aa15.72■□□□□ 0.11
CAPN1-205ENST00000526954 SEC16AO15027 2179 aa15.72■□□□□ 0.11
CAPN1-205ENST00000526954 NPIPB8E9PQR5 432 aa15.71■□□□□ 0.11
CAPN1-205ENST00000526954 SLCO1B7G3V0H7 640 aa15.71■□□□□ 0.11
CAPN1-205ENST00000526954 CPNE3O75131 537 aaKnown RBP15.71■□□□□ 0.11
CAPN1-205ENST00000526954 SEMA3DO95025 777 aa15.71■□□□□ 0.11
CAPN1-205ENST00000526954 ZNF28P17035 718 aa15.71■□□□□ 0.11
CAPN1-205ENST00000526954 RBMS1P29558 406 aaKnown RBP15.71■□□□□ 0.11
CAPN1-205ENST00000526954 HK2P52789 917 aa15.71■□□□□ 0.11
CAPN1-205ENST00000526954 HERC3Q15034 1050 aa15.71■□□□□ 0.11
CAPN1-205ENST00000526954 ABHD13Q7L211 337 aa15.71■□□□□ 0.11
CAPN1-205ENST00000526954 CRLF3Q8IUI8 442 aa15.71■□□□□ 0.11
CAPN1-205ENST00000526954 SRFBP1Q8NEF9 429 aaKnown RBP15.71■□□□□ 0.11
CAPN1-205ENST00000526954 OR2L5Q8NG80 312 aa15.71■□□□□ 0.11
CAPN1-205ENST00000526954 PIWIL2Q8TC59 973 aaKnown RBP15.71■□□□□ 0.11
CAPN1-205ENST00000526954 PROKR1Q8TCW9 393 aa15.71■□□□□ 0.11
CAPN1-205ENST00000526954 TWIST2Q8WVJ9 160 aa15.71■□□□□ 0.11
CAPN1-205ENST00000526954 MVB12AQ96EY5 273 aa15.71■□□□□ 0.11
CAPN1-205ENST00000526954 F2RL3Q96RI0 385 aa15.71■□□□□ 0.11
CAPN1-205ENST00000526954 OR51B5Q9H339 312 aa15.71■□□□□ 0.11
CAPN1-205ENST00000526954 ACTR5Q9H9F9 607 aaPredicted RBP15.71■□□□□ 0.11
CAPN1-205ENST00000526954 ASCL3Q9NQ33 180 aa15.71■□□□□ 0.11
CAPN1-205ENST00000526954 NMRK1Q9NWW6 199 aa15.71■□□□□ 0.11
CAPN1-205ENST00000526954 FIS1Q9Y3D6 152 aa15.71■□□□□ 0.11
CAPN1-205ENST00000526954 TMEM184BQ9Y519 407 aaPredicted RBP15.71■□□□□ 0.11
CAPN1-205ENST00000526954 SCN3AQ9NY46 2000 aa15.71■□□□□ 0.11
CAPN1-205ENST00000526954 SPTBN2O15020 2390 aa15.71■□□□□ 0.11
CAPN1-205ENST00000526954 FER1L5A0AVI2 2057 aa15.71■□□□□ 0.1
CAPN1-205ENST00000526954 TRABD2BA6NFA1 517 aa15.7■□□□□ 0.1
CAPN1-205ENST00000526954 TCP11X1B4DZS4 312 aa15.7■□□□□ 0.1
CAPN1-205ENST00000526954 SLC28A1O00337 649 aa15.7■□□□□ 0.1
CAPN1-205ENST00000526954 DSCR3O14972 297 aa15.7■□□□□ 0.1
CAPN1-205ENST00000526954 MED26O95402 600 aa15.7■□□□□ 0.1
CAPN1-205ENST00000526954 ETHE1O95571 254 aa15.7■□□□□ 0.1
CAPN1-205ENST00000526954 ZNF888P0CJ79 500 aaPredicted RBP15.7■□□□□ 0.1
CAPN1-205ENST00000526954 ALOX12P18054 663 aa15.7■□□□□ 0.1
CAPN1-205ENST00000526954 CD82P27701 267 aa15.7■□□□□ 0.1
CAPN1-205ENST00000526954 TGM3Q08188 693 aa15.7■□□□□ 0.1
CAPN1-205ENST00000526954 NIPAL1Q6NVV3 410 aa15.7■□□□□ 0.1
CAPN1-205ENST00000526954 ABHD17CQ6PCB6 329 aa15.7■□□□□ 0.1
CAPN1-205ENST00000526954 UBE3DQ7Z6J8 389 aa15.7■□□□□ 0.1
CAPN1-205ENST00000526954 SLC38A9Q8NBW4 561 aa15.7■□□□□ 0.1
CAPN1-205ENST00000526954 NXPE2Q96DL1 559 aa15.7■□□□□ 0.1
CAPN1-205ENST00000526954 HBEGFQ99075 208 aa15.7■□□□□ 0.1
CAPN1-205ENST00000526954 CENPKQ9BS16 269 aa15.7■□□□□ 0.1
CAPN1-205ENST00000526954 ACPTQ9BZG2 426 aa15.7■□□□□ 0.1
CAPN1-205ENST00000526954 ULBP3Q9BZM4 244 aa15.7■□□□□ 0.1
CAPN1-205ENST00000526954 PFDN4Q9NQP4 134 aa15.7■□□□□ 0.1
CAPN1-205ENST00000526954 VPS29Q9UBQ0 182 aa15.7■□□□□ 0.1
CAPN1-205ENST00000526954 VTI1BQ9UEU0 232 aa15.7■□□□□ 0.1
CAPN1-205ENST00000526954 ACSL6Q9UKU0 697 aa15.7■□□□□ 0.1
CAPN1-205ENST00000526954 MRPS2Q9Y399 296 aaKnown RBP15.7■□□□□ 0.1
CAPN1-205ENST00000526954 CCL27Q9Y4X3 112 aa15.7■□□□□ 0.1
CAPN1-205ENST00000526954 SDK2Q58EX2 2172 aa15.7■□□□□ 0.1
CAPN1-205ENST00000526954 A0A1B0GX78 115 aa15.69■□□□□ 0.1
CAPN1-205ENST00000526954 C4orf51C9J302 202 aa15.69■□□□□ 0.1
CAPN1-205ENST00000526954 PIP5K1BO14986 540 aa15.69■□□□□ 0.1
CAPN1-205ENST00000526954 ERI3O43414 337 aaKnown RBP15.69■□□□□ 0.1
CAPN1-205ENST00000526954 FOXS1O43638 330 aa15.69■□□□□ 0.1
CAPN1-205ENST00000526954 EDF1O60869 148 aaKnown RBP15.69■□□□□ 0.1
CAPN1-205ENST00000526954 STK17BO94768 372 aa15.69■□□□□ 0.1
CAPN1-205ENST00000526954 KIAA0754O94854 1291 aa15.69■□□□□ 0.1
CAPN1-205ENST00000526954 NSA2O95478 260 aaKnown RBP15.69■□□□□ 0.1
CAPN1-205ENST00000526954 DLGAP3O95886 979 aa15.69■□□□□ 0.1
CAPN1-205ENST00000526954 ONECUT2O95948 504 aa15.69■□□□□ 0.1
CAPN1-205ENST00000526954 NTRK1P04629 796 aa15.69■□□□□ 0.1
CAPN1-205ENST00000526954 SPINK2P20155 84 aa15.69■□□□□ 0.1
CAPN1-205ENST00000526954 PRPH2P23942 346 aa15.69■□□□□ 0.1
CAPN1-205ENST00000526954 SLC5A2P31639 672 aa15.69■□□□□ 0.1
CAPN1-205ENST00000526954 RORAP35398 523 aa15.69■□□□□ 0.1
CAPN1-205ENST00000526954 TSFMP43897 325 aaKnown RBP15.69■□□□□ 0.1
CAPN1-205ENST00000526954 SNRPNP63162 240 aaKnown RBP15.69■□□□□ 0.1
CAPN1-205ENST00000526954 SHC2P98077 582 aa15.69■□□□□ 0.1
CAPN1-205ENST00000526954 MAP7Q14244 749 aa15.69■□□□□ 0.1
CAPN1-205ENST00000526954 XKR7Q5GH72 579 aa15.69■□□□□ 0.1
CAPN1-205ENST00000526954 ZNF385CQ66K41 422 aaPredicted RBP15.69■□□□□ 0.1
CAPN1-205ENST00000526954 PRMT9Q6P2P2 845 aa15.69■□□□□ 0.1
CAPN1-205ENST00000526954 TRIM40Q6P9F5 258 aa15.69■□□□□ 0.1
CAPN1-205ENST00000526954 SCIMPQ6UWF3 145 aa15.69■□□□□ 0.1
CAPN1-205ENST00000526954 Q6ZSR9 355 aa15.69■□□□□ 0.1
CAPN1-205ENST00000526954 TTLL10Q6ZVT0 673 aa15.69■□□□□ 0.1
CAPN1-205ENST00000526954 RGMAQ96B86 450 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms