RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 ZNF285Q96NJ3 590 aa9.64□□□□□ -0.87
VPS28-204ENST00000526054 OR2A5Q96R48 311 aa9.64□□□□□ -0.87
VPS28-204ENST00000526054 AIF1LQ9BQI0 150 aa9.64□□□□□ -0.87
VPS28-204ENST00000526054 IQCGQ9H095 443 aaKnown RBP9.64□□□□□ -0.87
VPS28-204ENST00000526054 P4HTMQ9NXG6 502 aa9.64□□□□□ -0.87
VPS28-204ENST00000526054 B3GNT3Q9Y2A9 372 aa9.64□□□□□ -0.87
VPS28-204ENST00000526054 KCNE1BA0A087WTH5 132 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 LOC105369274A0A096LPK9 316 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 LOC102723532A0A0G2JNH3 316 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 TRBC2A0A5B9 178 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 FITM1A5D6W6 292 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 RGS16O15492 202 aaPredicted RBP9.63□□□□□ -0.87
VPS28-204ENST00000526054 H2AFYO75367 372 aaKnown RBP9.63□□□□□ -0.87
VPS28-204ENST00000526054 DDAH2O95865 285 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 EIF2S1P05198 315 aaKnown RBP9.63□□□□□ -0.87
VPS28-204ENST00000526054 CTSBP07858 339 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 C1GALT1C1LP0DN25 315 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 EPB42P16452 691 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 KRT4P19013 534 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 AGTR2P50052 363 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 FOXL2P58012 376 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 ZNF844Q08AG5 666 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 CASP8Q14790 479 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 PCBP2Q15366 365 aaKnown RBP eCLIP9.63□□□□□ -0.87
VPS28-204ENST00000526054 FAM214AQ32MH5 1076 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 NKAIN1Q4KMZ8 207 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 PAGE2BQ5JRK9 111 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 CATSPEREQ5SY80 951 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 CEP85LQ5SZL2 805 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 ATG9BQ674R7 924 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 MRPL14Q6P1L8 145 aaKnown RBP9.63□□□□□ -0.87
VPS28-204ENST00000526054 FBXO42Q6P3S6 717 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 LRIG3Q6UXM1 1119 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 PPP1R32Q7Z5V6 425 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 TRABD2AQ86V40 505 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 PLD3Q8IV08 490 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 OR4N4Q8N0Y3 316 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 C4orf33Q8N1A6 199 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 KRT78Q8N1N4 520 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 MFSD9Q8NBP5 474 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 CAMKVQ8NCB2 501 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 OR4K1Q8NGD4 311 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 SNRNP40Q96DI7 357 aaKnown RBP9.63□□□□□ -0.87
VPS28-204ENST00000526054 C19orf60Q96EN9 201 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 ZIM3Q96PE6 472 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 EFCAB11Q9BUY7 163 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 SARGQ9BW04 601 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 PITHD1Q9GZP4 211 aaPredicted RBP9.63□□□□□ -0.87
VPS28-204ENST00000526054 ACBD3Q9H3P7 528 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 EHD1Q9H4M9 534 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 ENAMQ9NRM1 1142 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 CUTCQ9NTM9 273 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 ASF1BQ9NVP2 202 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 TMEM216Q9P0N5 145 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 SENP1Q9P0U3 644 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 MID2Q9UJV3 735 aa9.63□□□□□ -0.87
VPS28-204ENST00000526054 UNC79Q9P2D8 2635 aa9.62□□□□□ -0.87
VPS28-204ENST00000526054 A0A1B0GX78 115 aa9.62□□□□□ -0.87
VPS28-204ENST00000526054 FEZF1A0PJY2 475 aa9.62□□□□□ -0.87
VPS28-204ENST00000526054 HYKKA2RU49 373 aa9.62□□□□□ -0.87
VPS28-204ENST00000526054 A8MT66 165 aa9.62□□□□□ -0.87
VPS28-204ENST00000526054 MASP2O00187 686 aa9.62□□□□□ -0.87
VPS28-204ENST00000526054 DSCR3O14972 297 aa9.62□□□□□ -0.87
VPS28-204ENST00000526054 ATP8B1O43520 1251 aa9.62□□□□□ -0.87
VPS28-204ENST00000526054 OR1F1O43749 312 aa9.62□□□□□ -0.87
VPS28-204ENST00000526054 CNOT3O75175 753 aaKnown RBP9.62□□□□□ -0.87
VPS28-204ENST00000526054 UMODP07911 640 aa9.62□□□□□ -0.87
VPS28-204ENST00000526054 SLC35G6P0C7Q6 338 aa9.62□□□□□ -0.87
VPS28-204ENST00000526054 MYZAPP0CAP1 466 aa9.62□□□□□ -0.87
VPS28-204ENST00000526054 EEF1DP29692 281 aaKnown RBP9.62□□□□□ -0.87
VPS28-204ENST00000526054 CRHR1P34998 444 aa9.62□□□□□ -0.87
VPS28-204ENST00000526054 BCL6P41182 706 aa9.62□□□□□ -0.87
VPS28-204ENST00000526054 SCTRP47872 440 aa9.62□□□□□ -0.87
VPS28-204ENST00000526054 EMP3P54852 163 aa9.62□□□□□ -0.87
VPS28-204ENST00000526054 MEF2AQ02078 507 aaPredicted RBP9.62□□□□□ -0.87
VPS28-204ENST00000526054 IRF8Q02556 426 aa9.62□□□□□ -0.87
VPS28-204ENST00000526054 SLC18A2Q05940 514 aa9.62□□□□□ -0.87
VPS28-204ENST00000526054 CHIT1Q13231 466 aa9.62□□□□□ -0.87
VPS28-204ENST00000526054 LAPTM5Q13571 262 aa9.62□□□□□ -0.87
VPS28-204ENST00000526054 GTF2H2Q13888 395 aa9.62□□□□□ -0.87
VPS28-204ENST00000526054 ELOAQ14241 798 aaKnown RBP9.62□□□□□ -0.87
VPS28-204ENST00000526054 SLBPQ14493 270 aaKnown RBP eCLIP9.62□□□□□ -0.87
VPS28-204ENST00000526054 HIST2H2ACQ16777 129 aaPredicted RBP9.62□□□□□ -0.87
VPS28-204ENST00000526054 NDUFA9Q16795 377 aa9.62□□□□□ -0.87
VPS28-204ENST00000526054 MUM1Q2TAK8 710 aa9.62□□□□□ -0.87
VPS28-204ENST00000526054 PRTGQ2VWP7 1150 aa9.62□□□□□ -0.87
VPS28-204ENST00000526054 CCDC153Q494R4 210 aa9.62□□□□□ -0.87
VPS28-204ENST00000526054 PLEKHN1Q494U1 663 aaPredicted RBP9.62□□□□□ -0.87
VPS28-204ENST00000526054 XKR6Q5GH73 641 aa9.62□□□□□ -0.87
VPS28-204ENST00000526054 GARNL3Q5VVW2 1013 aa9.62□□□□□ -0.87
VPS28-204ENST00000526054 HIST2H2AA3Q6FI13 130 aa9.62□□□□□ -0.87
VPS28-204ENST00000526054 GTF2H2CQ6P1K8 395 aa9.62□□□□□ -0.87
VPS28-204ENST00000526054 IGFL3Q6UXB1 125 aa9.62□□□□□ -0.87
VPS28-204ENST00000526054 SLCO4C1Q6ZQN7 724 aa9.62□□□□□ -0.87
VPS28-204ENST00000526054 SH2D5Q6ZV89 423 aa9.62□□□□□ -0.87
VPS28-204ENST00000526054 ASPGQ86U10 573 aa9.62□□□□□ -0.87
VPS28-204ENST00000526054 SLC22A9Q8IVM8 553 aa9.62□□□□□ -0.87
VPS28-204ENST00000526054 SRRM1Q8IYB3 904 aaKnown RBP9.62□□□□□ -0.87
VPS28-204ENST00000526054 ZADH2Q8N4Q0 377 aa9.62□□□□□ -0.87
VPS28-204ENST00000526054 CISD2Q8N5K1 135 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms