RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 TMIGD1Q6UXZ0 262 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 ZNF793Q6ZN11 406 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 GPRIN3Q6ZVF9 776 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 KMT5CQ86Y97 462 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 MYLK4Q86YV6 388 aaPredicted RBP6.17□□□□□ -1.42
CD44-214ENST00000525211 LAS2Q8IYD9 372 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 ALDH16A1Q8IZ83 802 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 MMP21Q8N119 569 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 CACTIN-AS1Q8N1I8 211 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 RAB42Q8N4Z0 105 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 AGBL5Q8NDL9 886 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 OR5T3Q8NGG3 340 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 HUS1BQ8NHY5 278 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 WDR48Q8TAF3 677 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 ZCCHC10Q8TBK6 192 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 PTCD3Q96EY7 689 aaKnown RBP6.17□□□□□ -1.42
CD44-214ENST00000525211 THOC1Q96FV9 657 aaKnown RBP6.17□□□□□ -1.42
CD44-214ENST00000525211 SMIM10Q96HG1 83 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 PPP1R36Q96LQ0 422 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 QRFPRQ96P65 431 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 TEFMQ96QE5 360 aaKnown RBP6.17□□□□□ -1.42
CD44-214ENST00000525211 MTERF1Q99551 399 aaKnown RBP6.17□□□□□ -1.42
CD44-214ENST00000525211 DPYSL5Q9BPU6 564 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 SARGQ9BW04 601 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 CHRNA10Q9GZZ6 450 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 PCBD2Q9H0N5 130 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 RHBGQ9H310 441 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 ACTR8Q9H981 624 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 DMRT3Q9NQL9 472 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 NKIRAS1Q9NYS0 192 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 TMCO1Q9UM00 188 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 PLCL2Q9UPR0 1127 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 TNPO3Q9Y5L0 923 aaKnown RBP6.17□□□□□ -1.42
CD44-214ENST00000525211 AP1M2Q9Y6Q5 423 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 MAU2Q9Y6X3 613 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 EPG5Q9HCE0 2579 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 CFAP47Q6ZTR5 3102 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 TPRP12270 2363 aaKnown RBP6.17□□□□□ -1.42
CD44-214ENST00000525211 PCSK5Q92824 1860 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 A0A0A6YYC8 382 aaPredicted RBP6.16□□□□□ -1.42
CD44-214ENST00000525211 MYOCOSA0A1B0GUC4 107 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 A0A1W2PS29 197 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 FITM1A5D6W6 292 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 PABPN1LA6NDY0 278 aaKnown RBP6.16□□□□□ -1.42
CD44-214ENST00000525211 CDRT15L2A8MXV6 281 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 B4E171 279 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 FAM227AF5H4B4 570 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 H0YIV9 168 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 I3L1I5 382 aaPredicted RBP6.16□□□□□ -1.42
CD44-214ENST00000525211 SGK494L7N484 410 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 PLPP1O14494 284 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 HGSO14964 777 aaPredicted RBP6.16□□□□□ -1.42
CD44-214ENST00000525211 TOX3O15405 576 aaPredicted RBP6.16□□□□□ -1.42
CD44-214ENST00000525211 KDM1AO60341 852 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 BRINP1O60477 761 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 EEDO75530 441 aaKnown RBP6.16□□□□□ -1.42
CD44-214ENST00000525211 JRKO75564 520 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 PRKRAO75569 313 aaKnown RBP6.16□□□□□ -1.42
CD44-214ENST00000525211 CCNDBP1O95273 360 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 DLGAP3O95886 979 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 GBAP04062 536 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 LINC00032P0C843 101 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 ZNF888P0CJ79 500 aaPredicted RBP6.16□□□□□ -1.42
CD44-214ENST00000525211 KITP10721 976 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 EZRP15311 586 aaKnown RBP6.16□□□□□ -1.42
CD44-214ENST00000525211 IL1RNP18510 177 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 SLC5A2P31639 672 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 RORAP35398 523 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 TSPAN7P41732 249 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 OR1D4P47884 311 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 ITGA1P56199 1179 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 RPS15AP62244 130 aaKnown RBP6.16□□□□□ -1.42
CD44-214ENST00000525211 RAE1P78406 368 aaKnown RBP6.16□□□□□ -1.42
CD44-214ENST00000525211 BTKQ06187 659 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 TBL3Q12788 808 aaKnown RBP6.16□□□□□ -1.42
CD44-214ENST00000525211 STX3Q13277 289 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 RUNX2Q13950 521 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 ERV3-1Q14264 604 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 SLC9A5Q14940 896 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 RTP5Q14D33 572 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 GGTA1PQ4G0N0 100 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 CFAP157Q5JU67 520 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 SH2D4BQ5SQS7 431 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 VWA5B1Q5TIE3 1220 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 LIPJQ5W064 366 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 KANK2Q63ZY3 851 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 MED27Q6P2C8 311 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 DNAJC14Q6Y2X3 702 aaPredicted RBP6.16□□□□□ -1.42
CD44-214ENST00000525211 Q6ZSR9 355 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 FAM47EQ6ZV65 393 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 ASPGQ86U10 573 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 AFAP1L2Q8N4X5 818 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 CSNK1A1LQ8N752 337 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 GALNT6Q8NCL4 622 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 TMEM52Q8NDY8 209 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 OR9A4Q8NGU2 314 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 RFWD2Q8NHY2 731 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 WDR36Q8NI36 951 aaKnown RBP6.16□□□□□ -1.42
CD44-214ENST00000525211 NT5CQ8TCD5 201 aa6.16□□□□□ -1.42
CD44-214ENST00000525211 UTP15Q8TED0 518 aaKnown RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms