RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 IL10P22301 178 aa17.5■□□□□ 0.39
CAPN1-203ENST00000525013 SPRP35270 261 aaPredicted RBP17.5■□□□□ 0.39
CAPN1-203ENST00000525013 SOX11P35716 441 aa17.5■□□□□ 0.39
CAPN1-203ENST00000525013 TSFMP43897 325 aaKnown RBP17.5■□□□□ 0.39
CAPN1-203ENST00000525013 SLC7A5Q01650 507 aa17.5■□□□□ 0.39
CAPN1-203ENST00000525013 CKAP4Q07065 602 aaKnown RBP17.5■□□□□ 0.39
CAPN1-203ENST00000525013 ACTN3Q08043 901 aaPredicted RBP17.5■□□□□ 0.39
CAPN1-203ENST00000525013 ELOAQ14241 798 aaKnown RBP17.5■□□□□ 0.39
CAPN1-203ENST00000525013 ABRAXAS2Q15018 415 aa17.5■□□□□ 0.39
CAPN1-203ENST00000525013 NSDHLQ15738 373 aa17.5■□□□□ 0.39
CAPN1-203ENST00000525013 BTBD16Q32M84 506 aa17.5■□□□□ 0.39
CAPN1-203ENST00000525013 GRTP1Q5TC63 336 aa17.5■□□□□ 0.39
CAPN1-203ENST00000525013 B3GNTL1Q67FW5 361 aaPredicted RBP17.5■□□□□ 0.39
CAPN1-203ENST00000525013 ZDHHC24Q6UX98 284 aa17.5■□□□□ 0.39
CAPN1-203ENST00000525013 ZNF572Q7Z3I7 529 aaPredicted RBP17.5■□□□□ 0.39
CAPN1-203ENST00000525013 ANKRD37Q7Z713 158 aa17.5■□□□□ 0.39
CAPN1-203ENST00000525013 ANKRD53Q8N9V6 530 aa17.5■□□□□ 0.39
CAPN1-203ENST00000525013 TRPV3Q8NET8 790 aa17.5■□□□□ 0.39
CAPN1-203ENST00000525013 OR1N1Q8NGS0 311 aa17.5■□□□□ 0.39
CAPN1-203ENST00000525013 MAGEB10Q96LZ2 347 aaPredicted RBP17.5■□□□□ 0.39
CAPN1-203ENST00000525013 C16orf45Q96MC5 204 aaPredicted RBP17.5■□□□□ 0.39
CAPN1-203ENST00000525013 OR1F2PQ96R84 312 aa17.5■□□□□ 0.39
CAPN1-203ENST00000525013 PHACTR1Q9C0D0 580 aa17.5■□□□□ 0.39
CAPN1-203ENST00000525013 LRRC4CQ9HCJ2 640 aa17.5■□□□□ 0.39
CAPN1-203ENST00000525013 WWOXQ9NZC7 414 aa17.5■□□□□ 0.39
CAPN1-203ENST00000525013 CTAGE15A4D2H0 777 aa17.49■□□□□ 0.39
CAPN1-203ENST00000525013 ANKUB1A6NFN9 424 aa17.49■□□□□ 0.39
CAPN1-203ENST00000525013 URADA6NGE7 173 aa17.49■□□□□ 0.39
CAPN1-203ENST00000525013 DNAJB6O75190 326 aa17.49■□□□□ 0.39
CAPN1-203ENST00000525013 SEMA7AO75326 666 aa17.49■□□□□ 0.39
CAPN1-203ENST00000525013 FAM155BO75949 473 aa17.49■□□□□ 0.39
CAPN1-203ENST00000525013 CBX6O95503 412 aa17.49■□□□□ 0.39
CAPN1-203ENST00000525013 FHP07954 510 aa17.49■□□□□ 0.39
CAPN1-203ENST00000525013 C1GALT1C1LP0DN25 315 aa17.49■□□□□ 0.39
CAPN1-203ENST00000525013 STX2P32856 288 aa17.49■□□□□ 0.39
CAPN1-203ENST00000525013 SLC6A12P48065 614 aa17.49■□□□□ 0.39
CAPN1-203ENST00000525013 AGTR2P50052 363 aa17.49■□□□□ 0.39
CAPN1-203ENST00000525013 RAB8AP61006 207 aa17.49■□□□□ 0.39
CAPN1-203ENST00000525013 RAB10P61026 200 aa17.49■□□□□ 0.39
CAPN1-203ENST00000525013 ATP6V0D1P61421 351 aa17.49■□□□□ 0.39
CAPN1-203ENST00000525013 OR4D1Q15615 310 aa17.49■□□□□ 0.39
CAPN1-203ENST00000525013 ABHD17BQ5VST6 288 aa17.49■□□□□ 0.39
CAPN1-203ENST00000525013 NIPAL1Q6NVV3 410 aa17.49■□□□□ 0.39
CAPN1-203ENST00000525013 C8orf74Q6P047 294 aa17.49■□□□□ 0.39
CAPN1-203ENST00000525013 CTAGE6Q86UF2 777 aa17.49■□□□□ 0.39
CAPN1-203ENST00000525013 TCAIMQ8N3R3 496 aa17.49■□□□□ 0.39
CAPN1-203ENST00000525013 GRHL3Q8TE85 626 aa17.49■□□□□ 0.39
CAPN1-203ENST00000525013 UTP15Q8TED0 518 aaKnown RBP17.49■□□□□ 0.39
CAPN1-203ENST00000525013 FBF1Q8TES7 1133 aa17.49■□□□□ 0.39
CAPN1-203ENST00000525013 EXT2Q93063 718 aa17.49■□□□□ 0.39
CAPN1-203ENST00000525013 TBC1D20Q96BZ9 403 aa17.49■□□□□ 0.39
CAPN1-203ENST00000525013 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.49■□□□□ 0.39
CAPN1-203ENST00000525013 LANCL2Q9NS86 450 aa17.49■□□□□ 0.39
CAPN1-203ENST00000525013 CD274Q9NZQ7 290 aa17.49■□□□□ 0.39
CAPN1-203ENST00000525013 TEKT2Q9UIF3 430 aa17.49■□□□□ 0.39
CAPN1-203ENST00000525013 ESYT3A0FGR9 886 aa17.48■□□□□ 0.39
CAPN1-203ENST00000525013 B4GALT2O60909 372 aa17.48■□□□□ 0.39
CAPN1-203ENST00000525013 URI1O94763 535 aaPredicted RBP17.48■□□□□ 0.39
CAPN1-203ENST00000525013 C1QAP02745 245 aa17.48■□□□□ 0.39
CAPN1-203ENST00000525013 CD1DP15813 335 aa17.48■□□□□ 0.39
CAPN1-203ENST00000525013 RHAGQ02094 409 aa17.48■□□□□ 0.39
CAPN1-203ENST00000525013 ZNF33BQ06732 778 aa17.48■□□□□ 0.39
CAPN1-203ENST00000525013 SLMAPQ14BN4 828 aa17.48■□□□□ 0.39
CAPN1-203ENST00000525013 SFT2D3Q587I9 215 aa17.48■□□□□ 0.39
CAPN1-203ENST00000525013 FBXO48Q5FWF7 155 aa17.48■□□□□ 0.39
CAPN1-203ENST00000525013 TOR1AIP1Q5JTV8 583 aa17.48■□□□□ 0.39
CAPN1-203ENST00000525013 PLAG1Q6DJT9 500 aa17.48■□□□□ 0.39
CAPN1-203ENST00000525013 SLCO4C1Q6ZQN7 724 aa17.48■□□□□ 0.39
CAPN1-203ENST00000525013 RAPH1Q70E73 1250 aa17.48■□□□□ 0.39
CAPN1-203ENST00000525013 SNX31Q8N9S9 440 aa17.48■□□□□ 0.39
CAPN1-203ENST00000525013 CCT6BQ92526 530 aa17.48■□□□□ 0.39
CAPN1-203ENST00000525013 TSLPQ969D9 159 aa17.48■□□□□ 0.39
CAPN1-203ENST00000525013 SLC6A16Q9GZN6 736 aa17.48■□□□□ 0.39
CAPN1-203ENST00000525013 RHBGQ9H310 441 aa17.48■□□□□ 0.39
CAPN1-203ENST00000525013 KLHL31Q9H511 634 aa17.48■□□□□ 0.39
CAPN1-203ENST00000525013 CNOT10Q9H9A5 744 aaKnown RBP17.48■□□□□ 0.39
CAPN1-203ENST00000525013 DNAJC11Q9NVH1 559 aa17.48■□□□□ 0.39
CAPN1-203ENST00000525013 STMN3Q9NZ72 180 aa17.48■□□□□ 0.39
CAPN1-203ENST00000525013 RNF112Q9ULX5 631 aa17.48■□□□□ 0.39
CAPN1-203ENST00000525013 TAPBPO15533 448 aa17.47■□□□□ 0.39
CAPN1-203ENST00000525013 WDPCPO95876 746 aa17.47■□□□□ 0.39
CAPN1-203ENST00000525013 S100BP04271 92 aaPredicted RBP17.47■□□□□ 0.39
CAPN1-203ENST00000525013 SERPINA6P08185 405 aa17.47■□□□□ 0.39
CAPN1-203ENST00000525013 JAK1P23458 1154 aa17.47■□□□□ 0.39
CAPN1-203ENST00000525013 GMPRP36959 345 aa17.47■□□□□ 0.39
CAPN1-203ENST00000525013 HSPA7P48741 367 aa17.47■□□□□ 0.39
CAPN1-203ENST00000525013 TNFSF10P50591 281 aa17.47■□□□□ 0.39
CAPN1-203ENST00000525013 OR4D2P58180 307 aa17.47■□□□□ 0.39
CAPN1-203ENST00000525013 SLBPQ14493 270 aaKnown RBP eCLIP17.47■□□□□ 0.39
CAPN1-203ENST00000525013 ZKSCAN8Q15776 578 aaPredicted RBP17.47■□□□□ 0.39
CAPN1-203ENST00000525013 SULT1C3Q6IMI6 304 aa17.47■□□□□ 0.39
CAPN1-203ENST00000525013 FAM180AQ6UWF9 173 aa17.47■□□□□ 0.39
CAPN1-203ENST00000525013 TMIGD1Q6UXZ0 262 aa17.47■□□□□ 0.39
CAPN1-203ENST00000525013 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.47■□□□□ 0.39
CAPN1-203ENST00000525013 KLHDC8AQ8IYD2 350 aa17.47■□□□□ 0.39
CAPN1-203ENST00000525013 KRT78Q8N1N4 520 aa17.47■□□□□ 0.39
CAPN1-203ENST00000525013 PLPP5Q8NEB5 264 aa17.47■□□□□ 0.39
CAPN1-203ENST00000525013 HAS2Q92819 552 aa17.47■□□□□ 0.39
CAPN1-203ENST00000525013 ESAMQ96AP7 390 aa17.47■□□□□ 0.39
CAPN1-203ENST00000525013 MRRFQ96E11 262 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms