RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 PGBD5Q8N414 524 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 RASGEF1CQ8N431 466 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 TMEM105Q8N8V8 129 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 IL17RCQ8NAC3 791 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 KCTD6Q8NC69 237 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 TRIM58Q8NG06 486 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 OR1N1Q8NGS0 311 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 EXD1Q8NHP7 514 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 FIBINQ8TAL6 211 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 CSGALNACT1Q8TDX6 532 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 C2CD4CQ8TF44 421 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 STYXQ8WUJ0 223 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 FAM3CQ92520 227 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 ADGRG7Q96K78 797 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 C16orf45Q96MC5 204 aaPredicted RBP2.91□□□□□ -1.94
CSDE1-208ENST00000524652 TEFMQ96QE5 360 aaKnown RBP2.91□□□□□ -1.94
CSDE1-208ENST00000524652 XPO6Q96QU8 1125 aaKnown RBP2.91□□□□□ -1.94
CSDE1-208ENST00000524652 LGMNQ99538 433 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 P2RY13Q9BPV8 354 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 ZNF670Q9BS34 389 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 FEM1AQ9BSK4 669 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 HEMGNQ9BXL5 484 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 CALN1Q9BXU9 219 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 OSBPL8Q9BZF1 889 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 TMEM245Q9H330 911 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 TBC1D17Q9HA65 648 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 TCF7L2Q9NQB0 619 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 PRDM8Q9NQV8 689 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 DNAJC17Q9NVM6 304 aaKnown RBP2.91□□□□□ -1.94
CSDE1-208ENST00000524652 SLC12A6Q9UHW9 1150 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 SLCO3A1Q9UIG8 710 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 BAG5Q9UL15 447 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 DAPP1Q9UN19 280 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 CACNA1EQ15878 2313 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 KNL1Q8NG31 2342 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 PCDH15Q96QU1 1955 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 KIF26BQ2KJY2 2108 aa2.9□□□□□ -1.94
CSDE1-208ENST00000524652 NBEAQ8NFP9 2946 aa2.9□□□□□ -1.94
CSDE1-208ENST00000524652 A0A0A0MQY5 61 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.9□□□□□ -1.95
CSDE1-208ENST00000524652 A0A1W2PQF6 199 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 ILVBLA1L0T0 632 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 TMEM221A6NGB7 291 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 MIF4GDA9UHW6 222 aaKnown RBP2.9□□□□□ -1.95
CSDE1-208ENST00000524652 ZNF487B1APH4 448 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 APOC4-APOC2K7ER74 178 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 M0R296 226 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 BMPR1BO00238 502 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 DFFAO00273 331 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 PLK4O00444 970 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 FFAR2O15552 330 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 KDELR3O43731 214 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 PRAMEF11O60813 436 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 SOCS5O75159 536 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 TNFRSF6BO95407 300 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 KLF8O95600 359 aaPredicted RBP2.9□□□□□ -1.95
CSDE1-208ENST00000524652 IGLV2-11P01706 119 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 APOC2P02655 101 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 HLA-DQB2P05538 268 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 CTSLP07711 333 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 MMP2P08253 660 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 TDGF1P13385 188 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 ETS1P14921 441 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 AOC1P19801 751 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 GNALP38405 381 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 GARSP41250 739 aaKnown RBP2.9□□□□□ -1.95
CSDE1-208ENST00000524652 TNFRSF4P43489 277 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 KCNJ1P48048 391 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 RPS6KA3P51812 740 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 NDST2P52849 883 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 PLK1P53350 603 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 RWDD2BP57060 319 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 KRTAP10-5P60370 271 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 MAXP61244 160 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 GNG11P61952 73 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 ECT2LQ008S8 904 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 OTUD4Q01804 1114 aaKnown RBP2.9□□□□□ -1.95
CSDE1-208ENST00000524652 GNA12Q03113 381 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 PPIDQ08752 370 aaKnown RBP2.9□□□□□ -1.95
CSDE1-208ENST00000524652 GALNT2Q10471 571 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 ZNF177Q13360 481 aaPredicted RBP2.9□□□□□ -1.95
CSDE1-208ENST00000524652 SNTA1Q13424 505 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 OLIG2Q13516 323 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 CDH18Q13634 790 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 RPS6KA1Q15418 735 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 CYTH1Q15438 398 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 OASLQ15646 514 aaKnown RBP2.9□□□□□ -1.95
CSDE1-208ENST00000524652 IL31Q6EBC2 164 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 TTC27Q6P3X3 843 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 TSSK4Q6SA08 328 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 TMCO3Q6UWJ1 677 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 LRRC31Q6UY01 552 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 BBS12Q6ZW61 710 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 VSIG1Q86XK7 387 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 SLC13A5Q86YT5 568 aaPredicted RBP2.9□□□□□ -1.95
CSDE1-208ENST00000524652 CCDC50Q8IVM0 306 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 UBALD2Q8IYN6 164 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 RCOR2Q8IZ40 523 aa2.9□□□□□ -1.95
CSDE1-208ENST00000524652 MAML2Q8IZL2 1156 aaPredicted RBP2.9□□□□□ -1.95
CSDE1-208ENST00000524652 ALLCQ8N6M5 410 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms