RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 DGUOKQ16854 277 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 TTLL9Q3SXZ7 439 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 RFTN2Q52LD8 501 aaPredicted RBP7.55□□□□□ -1.2
SPIDR-223ENST00000524033 SPANXN4Q5MJ08 99 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 LY6G5CQ5SRR4 150 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 STPG1Q5TH74 334 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 UBE2UQ5VVX9 321 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 CPZQ66K79 652 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 KDM4DQ6B0I6 523 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 PLEKHG7Q6ZR37 379 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 ZNF551Q7Z340 670 aaPredicted RBP7.55□□□□□ -1.2
SPIDR-223ENST00000524033 SNX20Q7Z614 316 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 C11orf74Q86VG3 221 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 CYP4Z1Q86W10 505 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 TMEM25Q86YD3 366 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 SFTPA1Q8IWL2 248 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 STK40Q8N2I9 435 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 C10orf111Q8N326 155 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 SVOPQ8N4V2 548 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 ARL10Q8N8L6 244 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 NAT16Q8N8M0 369 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 OR13H1Q8NG92 308 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 OR7D4Q8NG98 312 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 CNIH3Q8TBE1 160 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 METTL6Q8TCB7 284 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 LKAAEAR1Q8TD35 194 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 MCOLN3Q8TDD5 553 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 FRS2Q8WU20 508 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 FAM162AQ96A26 154 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 FCRL1Q96LA6 429 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 RPRD1AQ96P16 312 aaPredicted RBP7.55□□□□□ -1.2
SPIDR-223ENST00000524033 ZBTB18Q99592 522 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 SH3GL1Q99961 368 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 C19orf43Q9BQ61 176 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 HEPHQ9BQS7 1158 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 NTMT1Q9BV86 223 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 DGCR6LQ9BY27 220 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 TPSD1Q9BZJ3 242 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 NXF2Q9GZY0 626 aaKnown RBP7.55□□□□□ -1.2
SPIDR-223ENST00000524033 RMND5AQ9H871 391 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 SP140LQ9H930 580 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 CCNB1IP1Q9NPC3 277 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 TLR8Q9NR97 1041 aaKnown RBP7.55□□□□□ -1.2
SPIDR-223ENST00000524033 RXFP3Q9NSD7 469 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 MARCH2Q9P0N8 246 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 ANKMY1Q9P2S6 941 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 DEC1Q9P2X7 70 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 ERVK-18Q9QC07 812 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 UBA2Q9UBT2 640 aaPredicted RBP7.55□□□□□ -1.2
SPIDR-223ENST00000524033 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.55□□□□□ -1.2
SPIDR-223ENST00000524033 EVLQ9UI08 416 aaPredicted RBP7.55□□□□□ -1.2
SPIDR-223ENST00000524033 OSGIN1Q9UJX0 560 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 NDRG4Q9ULP0 352 aaKnown RBP7.55□□□□□ -1.2
SPIDR-223ENST00000524033 MMP17Q9ULZ9 603 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 PKP3Q9Y446 797 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 PCDHB1Q9Y5F3 818 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 ACTL7AQ9Y615 435 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 A3GALT2U3KPV4 340 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 OBSL1O75147 1896 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 F5P12259 2224 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 BPTFQ12830 3046 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 MN1Q10571 1320 aaPredicted RBP7.54□□□□□ -1.2
SPIDR-223ENST00000524033 TRBV5-4A0A0C4DH59 114 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 SLC12A8A0AV02 714 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 ISPDA4D126 451 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 C2orf81A6NN90 581 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 MANBAO00462 879 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 GSTA4O15217 222 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 RAD51BO15315 384 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 FFAR2O15552 330 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 RGS14O43566 566 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 XPNPEP2O43895 674 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 TLR5O60602 858 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 MITFO75030 526 aaPredicted RBP7.54□□□□□ -1.2
SPIDR-223ENST00000524033 SEC22BO75396 215 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 ERN1O75460 977 aaKnown RBP7.54□□□□□ -1.2
SPIDR-223ENST00000524033 FKBP9O95302 570 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 KLF8O95600 359 aaPredicted RBP7.54□□□□□ -1.2
SPIDR-223ENST00000524033 EIF2S1P05198 315 aaKnown RBP7.54□□□□□ -1.2
SPIDR-223ENST00000524033 IRF1P10914 325 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 FPR1P21462 350 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 ALAS2P22557 587 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 NR4A1P22736 598 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 IGFBP5P24593 272 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 OR1E1P30953 314 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 SLC6A4P31645 630 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 MPLP40238 635 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 SERPINB10P48595 397 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 EIF2B2P49770 351 aaKnown RBP7.54□□□□□ -1.2
SPIDR-223ENST00000524033 DAPP51397 102 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 LIMK1P53667 647 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 TPD52P55327 224 aaPredicted RBP7.54□□□□□ -1.2
SPIDR-223ENST00000524033 CLDN8P56748 225 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 ABHD18Q0P651 414 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 SELENBP1Q13228 472 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 CLCA4Q14CN2 919 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 INAQ16352 499 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 MAPKAPK3Q16644 382 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 FAM174BQ3ZCQ3 159 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 IQCCQ4KMZ1 466 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms