RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 PSMF1Q92530 271 aa16.88■□□□□ 0.29
TRAPPC9-211ENST00000521700 TM9SF4Q92544 642 aa16.88■□□□□ 0.29
TRAPPC9-211ENST00000521700 EXT2Q93063 718 aa16.88■□□□□ 0.29
TRAPPC9-211ENST00000521700 TRIM44Q96DX7 344 aaPredicted RBP16.88■□□□□ 0.29
TRAPPC9-211ENST00000521700 SMIM10Q96HG1 83 aa16.88■□□□□ 0.29
TRAPPC9-211ENST00000521700 IMMP1LQ96LU5 166 aa16.88■□□□□ 0.29
TRAPPC9-211ENST00000521700 ATOH8Q96SQ7 321 aa16.88■□□□□ 0.29
TRAPPC9-211ENST00000521700 AICDAQ9GZX7 198 aa16.88■□□□□ 0.29
TRAPPC9-211ENST00000521700 B3GNT3Q9Y2A9 372 aa16.88■□□□□ 0.29
TRAPPC9-211ENST00000521700 ASB1Q9Y576 335 aa16.88■□□□□ 0.29
TRAPPC9-211ENST00000521700 UBR5O95071 2799 aaPredicted RBP16.87■□□□□ 0.29
TRAPPC9-211ENST00000521700 CHST10O43529 356 aa16.87■□□□□ 0.29
TRAPPC9-211ENST00000521700 ACSL3O95573 720 aa16.87■□□□□ 0.29
TRAPPC9-211ENST00000521700 S100BP04271 92 aaPredicted RBP16.87■□□□□ 0.29
TRAPPC9-211ENST00000521700 SERPINA7P05543 415 aa16.87■□□□□ 0.29
TRAPPC9-211ENST00000521700 SERPINA6P08185 405 aa16.87■□□□□ 0.29
TRAPPC9-211ENST00000521700 CELA2AP08217 269 aa16.87■□□□□ 0.29
TRAPPC9-211ENST00000521700 CYC1P08574 325 aa16.87■□□□□ 0.29
TRAPPC9-211ENST00000521700 PRR35P0CG20 571 aa16.87■□□□□ 0.29
TRAPPC9-211ENST00000521700 IL10P22301 178 aa16.87■□□□□ 0.29
TRAPPC9-211ENST00000521700 OLR1P78380 273 aa16.87■□□□□ 0.29
TRAPPC9-211ENST00000521700 IRF9Q00978 393 aa16.87■□□□□ 0.29
TRAPPC9-211ENST00000521700 INPP5JQ15735 1006 aaPredicted RBP16.87■□□□□ 0.29
TRAPPC9-211ENST00000521700 PRR30Q53SZ7 412 aaPredicted RBP16.87■□□□□ 0.29
TRAPPC9-211ENST00000521700 TMIGD1Q6UXZ0 262 aa16.87■□□□□ 0.29
TRAPPC9-211ENST00000521700 Q6ZS92 163 aa16.87■□□□□ 0.29
TRAPPC9-211ENST00000521700 LANCL3Q6ZV70 420 aa16.87■□□□□ 0.29
TRAPPC9-211ENST00000521700 ABHD13Q7L211 337 aa16.87■□□□□ 0.29
TRAPPC9-211ENST00000521700 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.87■□□□□ 0.29
TRAPPC9-211ENST00000521700 CEP112Q8N8E3 955 aa16.87■□□□□ 0.29
TRAPPC9-211ENST00000521700 SNX31Q8N9S9 440 aa16.87■□□□□ 0.29
TRAPPC9-211ENST00000521700 KCTD4Q8WVF5 259 aa16.87■□□□□ 0.29
TRAPPC9-211ENST00000521700 CD244Q9BZW8 370 aa16.87■□□□□ 0.29
TRAPPC9-211ENST00000521700 NT5DC2Q9H857 520 aa16.87■□□□□ 0.29
TRAPPC9-211ENST00000521700 SNX15Q9NRS6 342 aa16.87■□□□□ 0.29
TRAPPC9-211ENST00000521700 LANCL2Q9NS86 450 aa16.87■□□□□ 0.29
TRAPPC9-211ENST00000521700 RIC8BQ9NVN3 520 aa16.87■□□□□ 0.29
TRAPPC9-211ENST00000521700 NUDT4Q9NZJ9 180 aa16.87■□□□□ 0.29
TRAPPC9-211ENST00000521700 COPG2Q9UBF2 871 aa16.87■□□□□ 0.29
TRAPPC9-211ENST00000521700 CSAG2Q9Y5P2 127 aa16.87■□□□□ 0.29
TRAPPC9-211ENST00000521700 SCN2AQ99250 2005 aa16.87■□□□□ 0.29
TRAPPC9-211ENST00000521700 A0A087X1B8 175 aa16.86■□□□□ 0.29
TRAPPC9-211ENST00000521700 IGHV3-20A0A0C4DH32 117 aa16.86■□□□□ 0.29
TRAPPC9-211ENST00000521700 URADA6NGE7 173 aa16.86■□□□□ 0.29
TRAPPC9-211ENST00000521700 C4orf51C9J302 202 aa16.86■□□□□ 0.29
TRAPPC9-211ENST00000521700 UBXN8O00124 270 aa16.86■□□□□ 0.29
TRAPPC9-211ENST00000521700 CLGNO14967 610 aa16.86■□□□□ 0.29
TRAPPC9-211ENST00000521700 CCNT2O60583 730 aaKnown RBP16.86■□□□□ 0.29
TRAPPC9-211ENST00000521700 KERAO60938 352 aa16.86■□□□□ 0.29
TRAPPC9-211ENST00000521700 EPORP19235 508 aa16.86■□□□□ 0.29
TRAPPC9-211ENST00000521700 RHAGQ02094 409 aa16.86■□□□□ 0.29
TRAPPC9-211ENST00000521700 PDK4Q16654 411 aa16.86■□□□□ 0.29
TRAPPC9-211ENST00000521700 TOR1AIP1Q5JTV8 583 aa16.86■□□□□ 0.29
TRAPPC9-211ENST00000521700 NIPAL1Q6NVV3 410 aa16.86■□□□□ 0.29
TRAPPC9-211ENST00000521700 ISLR2Q6UXK2 745 aa16.86■□□□□ 0.29
TRAPPC9-211ENST00000521700 LINC00696Q6ZRV3 163 aa16.86■□□□□ 0.29
TRAPPC9-211ENST00000521700 CPEB2Q7Z5Q1 589 aaKnown RBP16.86■□□□□ 0.29
TRAPPC9-211ENST00000521700 CCDC91Q7Z6B0 441 aa16.86■□□□□ 0.29
TRAPPC9-211ENST00000521700 KRT78Q8N1N4 520 aa16.86■□□□□ 0.29
TRAPPC9-211ENST00000521700 EFCAB3Q8N7B9 438 aa16.86■□□□□ 0.29
TRAPPC9-211ENST00000521700 PLPP5Q8NEB5 264 aa16.86■□□□□ 0.29
TRAPPC9-211ENST00000521700 BRIX1Q8TDN6 353 aaKnown RBP16.86■□□□□ 0.29
TRAPPC9-211ENST00000521700 SLC44A1Q8WWI5 657 aa16.86■□□□□ 0.29
TRAPPC9-211ENST00000521700 WDR34Q96EX3 536 aa16.86■□□□□ 0.29
TRAPPC9-211ENST00000521700 OR1F2PQ96R84 312 aa16.86■□□□□ 0.29
TRAPPC9-211ENST00000521700 LMF1Q96S06 567 aa16.86■□□□□ 0.29
TRAPPC9-211ENST00000521700 RBCK1Q9BYM8 510 aa16.86■□□□□ 0.29
TRAPPC9-211ENST00000521700 EHD1Q9H4M9 534 aa16.86■□□□□ 0.29
TRAPPC9-211ENST00000521700 ZNF490Q9ULM2 529 aaPredicted RBP16.86■□□□□ 0.29
TRAPPC9-211ENST00000521700 A0A096LPK6 155 aa16.85■□□□□ 0.29
TRAPPC9-211ENST00000521700 SUPT3HB4E1H0 165 aa16.85■□□□□ 0.29
TRAPPC9-211ENST00000521700 SUPT3HO75486 399 aa16.85■□□□□ 0.29
TRAPPC9-211ENST00000521700 CDC123O75794 336 aaPredicted RBP16.85■□□□□ 0.29
TRAPPC9-211ENST00000521700 ALDOAP04075 364 aaKnown RBP16.85■□□□□ 0.29
TRAPPC9-211ENST00000521700 MTHFD2P13995 350 aa16.85■□□□□ 0.29
TRAPPC9-211ENST00000521700 CD22P20273 847 aa16.85■□□□□ 0.29
TRAPPC9-211ENST00000521700 TYK2P29597 1187 aa16.85■□□□□ 0.29
TRAPPC9-211ENST00000521700 AGTR2P50052 363 aa16.85■□□□□ 0.29
TRAPPC9-211ENST00000521700 SKP1P63208 163 aa16.85■□□□□ 0.29
TRAPPC9-211ENST00000521700 DOC2AQ14183 400 aa16.85■□□□□ 0.29
TRAPPC9-211ENST00000521700 XKR6Q5GH73 641 aa16.85■□□□□ 0.29
TRAPPC9-211ENST00000521700 LRRC70Q7Z2Q7 622 aa16.85■□□□□ 0.29
TRAPPC9-211ENST00000521700 VN1R5Q7Z5H4 357 aa16.85■□□□□ 0.29
TRAPPC9-211ENST00000521700 ANKRD37Q7Z713 158 aa16.85■□□□□ 0.29
TRAPPC9-211ENST00000521700 CUZD1Q86UP6 607 aa16.85■□□□□ 0.29
TRAPPC9-211ENST00000521700 ATCAYQ86WG3 371 aa16.85■□□□□ 0.29
TRAPPC9-211ENST00000521700 TTLQ8NG68 377 aa16.85■□□□□ 0.29
TRAPPC9-211ENST00000521700 TBC1D20Q96BZ9 403 aa16.85■□□□□ 0.29
TRAPPC9-211ENST00000521700 WDR77Q9BQA1 342 aaPredicted RBP16.85■□□□□ 0.29
TRAPPC9-211ENST00000521700 TUBB6Q9BUF5 446 aa16.85■□□□□ 0.29
TRAPPC9-211ENST00000521700 PITHD1Q9GZP4 211 aaPredicted RBP16.85■□□□□ 0.29
TRAPPC9-211ENST00000521700 ILKAPQ9H0C8 392 aaPredicted RBP16.85■□□□□ 0.29
TRAPPC9-211ENST00000521700 CLK4Q9HAZ1 481 aaKnown RBP16.85■□□□□ 0.29
TRAPPC9-211ENST00000521700 C19orf25Q9UFG5 118 aaPredicted RBP16.85■□□□□ 0.29
TRAPPC9-211ENST00000521700 SHANK1Q9Y566 2161 aa16.85■□□□□ 0.29
TRAPPC9-211ENST00000521700 CNTRLQ7Z7A1 2325 aa16.85■□□□□ 0.29
TRAPPC9-211ENST00000521700 SETXQ7Z333 2677 aaKnown RBP16.84■□□□□ 0.29
TRAPPC9-211ENST00000521700 LRIT2A6NDA9 550 aa16.84■□□□□ 0.29
TRAPPC9-211ENST00000521700 SEC24DO94855 1032 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC9-211ENST00000521700 KLHL2O95198 593 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms