RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 KIAA0040Q15053 153 aa21.16■□□□□ 0.98
PTP4A3-204ENST00000521578 TMEM154Q6P9G4 183 aa21.16■□□□□ 0.98
PTP4A3-204ENST00000521578 CYP2R1Q6VVX0 501 aa21.16■□□□□ 0.98
PTP4A3-204ENST00000521578 AMIGO1Q86WK6 493 aa21.16■□□□□ 0.98
PTP4A3-204ENST00000521578 PTRH1Q86Y79 214 aaKnown RBP21.16■□□□□ 0.98
PTP4A3-204ENST00000521578 L3MBTL4Q8NA19 623 aa21.16■□□□□ 0.98
PTP4A3-204ENST00000521578 OR10G6Q8NH81 332 aa21.16■□□□□ 0.98
PTP4A3-204ENST00000521578 RSC1A1Q92681 617 aa21.16■□□□□ 0.98
PTP4A3-204ENST00000521578 MENTQ9BUN1 341 aa21.16■□□□□ 0.98
PTP4A3-204ENST00000521578 EFHD1Q9BUP0 239 aa21.16■□□□□ 0.98
PTP4A3-204ENST00000521578 VCXQ9H320 206 aa21.16■□□□□ 0.98
PTP4A3-204ENST00000521578 SYNDIG1Q9H7V2 258 aa21.16■□□□□ 0.98
PTP4A3-204ENST00000521578 ACTR8Q9H981 624 aa21.16■□□□□ 0.98
PTP4A3-204ENST00000521578 FARSBQ9NSD9 589 aaKnown RBP21.16■□□□□ 0.98
PTP4A3-204ENST00000521578 KDM1AO60341 852 aa21.15■□□□□ 0.98
PTP4A3-204ENST00000521578 SLC16A8O95907 504 aa21.15■□□□□ 0.98
PTP4A3-204ENST00000521578 PIM1P11309 404 aaPredicted RBP21.15■□□□□ 0.98
PTP4A3-204ENST00000521578 AMD1P17707 334 aa21.15■□□□□ 0.98
PTP4A3-204ENST00000521578 RAB28P51157 221 aa21.15■□□□□ 0.98
PTP4A3-204ENST00000521578 NOVA1P51513 510 aaKnown RBP21.15■□□□□ 0.98
PTP4A3-204ENST00000521578 CCL7P80098 99 aa21.15■□□□□ 0.98
PTP4A3-204ENST00000521578 MED21Q13503 144 aa21.15■□□□□ 0.98
PTP4A3-204ENST00000521578 USP53Q70EK8 1073 aa21.15■□□□□ 0.98
PTP4A3-204ENST00000521578 FBXL8Q96CD0 374 aa21.15■□□□□ 0.98
PTP4A3-204ENST00000521578 AHCYL2Q96HN2 611 aaKnown RBP21.15■□□□□ 0.98
PTP4A3-204ENST00000521578 MAGEB10Q96LZ2 347 aaPredicted RBP21.15■□□□□ 0.98
PTP4A3-204ENST00000521578 LRTM1Q9HBL6 345 aa21.15■□□□□ 0.98
PTP4A3-204ENST00000521578 TOR4AQ9NXH8 423 aa21.15■□□□□ 0.98
PTP4A3-204ENST00000521578 SCOCQ9UIL1 159 aa21.15■□□□□ 0.98
PTP4A3-204ENST00000521578 SERTM1A2A2V5 107 aa21.15■□□□□ 0.98
PTP4A3-204ENST00000521578 OR6C74A6NCV1 312 aa21.15■□□□□ 0.98
PTP4A3-204ENST00000521578 DENRO43583 198 aaKnown RBP21.15■□□□□ 0.98
PTP4A3-204ENST00000521578 RPLP0P05388 317 aaKnown RBP21.15■□□□□ 0.98
PTP4A3-204ENST00000521578 PROS1P07225 676 aa21.15■□□□□ 0.98
PTP4A3-204ENST00000521578 GP1BAP07359 652 aa21.15■□□□□ 0.98
PTP4A3-204ENST00000521578 VARSP26640 1264 aaKnown RBP21.15■□□□□ 0.98
PTP4A3-204ENST00000521578 PKLRP30613 574 aa21.15■□□□□ 0.98
PTP4A3-204ENST00000521578 SHMT2P34897 504 aa21.15■□□□□ 0.98
PTP4A3-204ENST00000521578 GSK3BP49841 420 aa21.15■□□□□ 0.98
PTP4A3-204ENST00000521578 EPHA4P54764 986 aa21.15■□□□□ 0.98
PTP4A3-204ENST00000521578 RPL38P63173 70 aaKnown RBP21.15■□□□□ 0.98
PTP4A3-204ENST00000521578 PTCHD3Q3KNS1 767 aa21.15■□□□□ 0.98
PTP4A3-204ENST00000521578 NANOGP8Q6NSW7 305 aa21.15■□□□□ 0.98
PTP4A3-204ENST00000521578 DLEU7Q6UYE1 221 aa21.15■□□□□ 0.98
PTP4A3-204ENST00000521578 GLRX5Q86SX6 157 aa21.15■□□□□ 0.98
PTP4A3-204ENST00000521578 GLB1L3Q8NCI6 653 aaPredicted RBP21.15■□□□□ 0.98
PTP4A3-204ENST00000521578 DNAJB14Q8TBM8 379 aa21.15■□□□□ 0.98
PTP4A3-204ENST00000521578 NANOGQ9H9S0 305 aa21.15■□□□□ 0.98
PTP4A3-204ENST00000521578 CCM2LQ9NUG4 571 aaPredicted RBP21.15■□□□□ 0.98
PTP4A3-204ENST00000521578 EIF4E1BA6NMX2 242 aaKnown RBP21.14■□□□□ 0.97
PTP4A3-204ENST00000521578 NPIPB8E9PQR5 432 aa21.14■□□□□ 0.97
PTP4A3-204ENST00000521578 H0YJX3 145 aa21.14■□□□□ 0.97
PTP4A3-204ENST00000521578 LYNP07948 512 aa21.14■□□□□ 0.97
PTP4A3-204ENST00000521578 CD1CP29017 333 aa21.14■□□□□ 0.97
PTP4A3-204ENST00000521578 SIM1P81133 766 aaPredicted RBP21.14■□□□□ 0.97
PTP4A3-204ENST00000521578 LIPEQ05469 1076 aa21.14■□□□□ 0.97
PTP4A3-204ENST00000521578 FXNQ16595 210 aa21.14■□□□□ 0.97
PTP4A3-204ENST00000521578 RABL3Q5HYI8 236 aa21.14■□□□□ 0.97
PTP4A3-204ENST00000521578 CACHD1Q5VU97 1274 aa21.14■□□□□ 0.97
PTP4A3-204ENST00000521578 SLC2A7Q6PXP3 512 aa21.14■□□□□ 0.97
PTP4A3-204ENST00000521578 APLFQ8IW19 511 aaPredicted RBP21.14■□□□□ 0.97
PTP4A3-204ENST00000521578 RAB42Q8N4Z0 105 aa21.14■□□□□ 0.97
PTP4A3-204ENST00000521578 LINC01555Q8NAE3 123 aa21.14■□□□□ 0.97
PTP4A3-204ENST00000521578 ZNF480Q8WV37 535 aa21.14■□□□□ 0.97
PTP4A3-204ENST00000521578 NCSTNQ92542 709 aa21.14■□□□□ 0.97
PTP4A3-204ENST00000521578 ZBTB18Q99592 522 aa21.14■□□□□ 0.97
PTP4A3-204ENST00000521578 ABCG4Q9H172 646 aa21.14■□□□□ 0.97
PTP4A3-204ENST00000521578 LRRN3Q9H3W5 708 aa21.14■□□□□ 0.97
PTP4A3-204ENST00000521578 DNAJC11Q9NVH1 559 aa21.14■□□□□ 0.97
PTP4A3-204ENST00000521578 HRASLS2Q9NWW9 162 aa21.14■□□□□ 0.97
PTP4A3-204ENST00000521578 C1orf109Q9NX04 203 aa21.14■□□□□ 0.97
PTP4A3-204ENST00000521578 SLAMF8Q9P0V8 285 aa21.14■□□□□ 0.97
PTP4A3-204ENST00000521578 ATXN7L1Q9ULK2 861 aaPredicted RBP21.14■□□□□ 0.97
PTP4A3-204ENST00000521578 RAB26Q9ULW5 256 aa21.14■□□□□ 0.97
PTP4A3-204ENST00000521578 SNX6Q9UNH7 406 aa21.14■□□□□ 0.97
PTP4A3-204ENST00000521578 A0A1W2PQM1 296 aa21.13■□□□□ 0.97
PTP4A3-204ENST00000521578 BTN3A3O00478 584 aa21.13■□□□□ 0.97
PTP4A3-204ENST00000521578 ZW10O43264 779 aa21.13■□□□□ 0.97
PTP4A3-204ENST00000521578 RFPL3O75679 317 aa21.13■□□□□ 0.97
PTP4A3-204ENST00000521578 RSL1D1O76021 490 aaKnown RBP21.13■□□□□ 0.97
PTP4A3-204ENST00000521578 CEACAM1P13688 526 aa21.13■□□□□ 0.97
PTP4A3-204ENST00000521578 PCSK2P16519 638 aa21.13■□□□□ 0.97
PTP4A3-204ENST00000521578 POLR2CP19387 275 aaPredicted RBP21.13■□□□□ 0.97
PTP4A3-204ENST00000521578 PRPH2P23942 346 aa21.13■□□□□ 0.97
PTP4A3-204ENST00000521578 GRIA3P42263 894 aa21.13■□□□□ 0.97
PTP4A3-204ENST00000521578 GPLD1P80108 840 aa21.13■□□□□ 0.97
PTP4A3-204ENST00000521578 HMGCS1Q01581 520 aa21.13■□□□□ 0.97
PTP4A3-204ENST00000521578 FOLH1Q04609 750 aa21.13■□□□□ 0.97
PTP4A3-204ENST00000521578 TSTA3Q13630 321 aaPredicted RBP21.13■□□□□ 0.97
PTP4A3-204ENST00000521578 IMPG1Q17R60 797 aa21.13■□□□□ 0.97
PTP4A3-204ENST00000521578 SLCO6A1Q86UG4 719 aa21.13■□□□□ 0.97
PTP4A3-204ENST00000521578 SYTL1Q8IYJ3 562 aa21.13■□□□□ 0.97
PTP4A3-204ENST00000521578 ALG2Q9H553 416 aa21.13■□□□□ 0.97
PTP4A3-204ENST00000521578 CXorf56Q9H5V9 222 aa21.13■□□□□ 0.97
PTP4A3-204ENST00000521578 SPATA7Q9P0W8 599 aa21.13■□□□□ 0.97
PTP4A3-204ENST00000521578 DCDC2BA2VCK2 349 aa21.12■□□□□ 0.97
PTP4A3-204ENST00000521578 DUX1O43812 170 aa21.12■□□□□ 0.97
PTP4A3-204ENST00000521578 SEC22BO75396 215 aa21.12■□□□□ 0.97
PTP4A3-204ENST00000521578 IMPA1P29218 277 aa21.12■□□□□ 0.97
PTP4A3-204ENST00000521578 CAPZBP47756 277 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms