RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 RHAGQ02094 409 aa16.08■□□□□ 0.16
SQLE-205ENST00000521232 ZNF169Q14929 603 aaPredicted RBP16.08■□□□□ 0.16
SQLE-205ENST00000521232 RBBP5Q15291 538 aaKnown RBP16.08■□□□□ 0.16
SQLE-205ENST00000521232 DEFB134Q4QY38 66 aa16.08■□□□□ 0.16
SQLE-205ENST00000521232 FHL5Q5TD97 284 aa16.08■□□□□ 0.16
SQLE-205ENST00000521232 MFSD4BQ5TF39 518 aa16.08■□□□□ 0.16
SQLE-205ENST00000521232 LANCL3Q6ZV70 420 aa16.08■□□□□ 0.16
SQLE-205ENST00000521232 ABHD13Q7L211 337 aa16.08■□□□□ 0.16
SQLE-205ENST00000521232 ANKRD37Q7Z713 158 aa16.08■□□□□ 0.16
SQLE-205ENST00000521232 GPSM1Q86YR5 675 aa16.08■□□□□ 0.16
SQLE-205ENST00000521232 SIRT6Q8N6T7 355 aa16.08■□□□□ 0.16
SQLE-205ENST00000521232 AMER2Q8N7J2 671 aa16.08■□□□□ 0.16
SQLE-205ENST00000521232 PPM1NQ8N819 430 aa16.08■□□□□ 0.16
SQLE-205ENST00000521232 CATSPER1Q8NEC5 780 aa16.08■□□□□ 0.16
SQLE-205ENST00000521232 OR5T3Q8NGG3 340 aa16.08■□□□□ 0.16
SQLE-205ENST00000521232 CREB3L4Q8TEY5 395 aa16.08■□□□□ 0.16
SQLE-205ENST00000521232 KIAA1191Q96A73 305 aa16.08■□□□□ 0.16
SQLE-205ENST00000521232 PEX11GQ96HA9 241 aa16.08■□□□□ 0.16
SQLE-205ENST00000521232 CAPS2Q9BXY5 557 aa16.08■□□□□ 0.16
SQLE-205ENST00000521232 ZDHHC18Q9NUE0 388 aa16.08■□□□□ 0.16
SQLE-205ENST00000521232 GPRC5BQ9NZH0 403 aa16.08■□□□□ 0.16
SQLE-205ENST00000521232 COPG2Q9UBF2 871 aa16.08■□□□□ 0.16
SQLE-205ENST00000521232 NTNG1Q9Y2I2 539 aa16.08■□□□□ 0.16
SQLE-205ENST00000521232 IGHV3-20A0A0C4DH32 117 aa16.07■□□□□ 0.16
SQLE-205ENST00000521232 ZNF860A6NHJ4 632 aa16.07■□□□□ 0.16
SQLE-205ENST00000521232 NCF1BA6NI72 391 aaPredicted RBP16.07■□□□□ 0.16
SQLE-205ENST00000521232 NCF1CA8MVU1 366 aaPredicted RBP16.07■□□□□ 0.16
SQLE-205ENST00000521232 CHST10O43529 356 aa16.07■□□□□ 0.16
SQLE-205ENST00000521232 H2AFYO75367 372 aaKnown RBP16.07■□□□□ 0.16
SQLE-205ENST00000521232 FAM155BO75949 473 aa16.07■□□□□ 0.16
SQLE-205ENST00000521232 URI1O94763 535 aaPredicted RBP16.07■□□□□ 0.16
SQLE-205ENST00000521232 B3GALT4O96024 378 aa16.07■□□□□ 0.16
SQLE-205ENST00000521232 SERPINA6P08185 405 aa16.07■□□□□ 0.16
SQLE-205ENST00000521232 ZNF888P0CJ79 500 aaPredicted RBP16.07■□□□□ 0.16
SQLE-205ENST00000521232 ITGAMP11215 1152 aa16.07■□□□□ 0.16
SQLE-205ENST00000521232 NCF1P14598 390 aaPredicted RBP16.07■□□□□ 0.16
SQLE-205ENST00000521232 CDC16Q13042 620 aa16.07■□□□□ 0.16
SQLE-205ENST00000521232 MRPL49Q13405 166 aaKnown RBP16.07■□□□□ 0.16
SQLE-205ENST00000521232 NAB1Q13506 487 aa16.07■□□□□ 0.16
SQLE-205ENST00000521232 OR4D1Q15615 310 aa16.07■□□□□ 0.16
SQLE-205ENST00000521232 PLAG1Q6DJT9 500 aa16.07■□□□□ 0.16
SQLE-205ENST00000521232 SULT1C3Q6IMI6 304 aa16.07■□□□□ 0.16
SQLE-205ENST00000521232 C8orf74Q6P047 294 aa16.07■□□□□ 0.16
SQLE-205ENST00000521232 RPUSD3Q6P087 351 aaKnown RBP16.07■□□□□ 0.16
SQLE-205ENST00000521232 TBC1D20Q96BZ9 403 aa16.07■□□□□ 0.16
SQLE-205ENST00000521232 CNDP1Q96KN2 507 aa16.07■□□□□ 0.16
SQLE-205ENST00000521232 C16orf45Q96MC5 204 aaPredicted RBP16.07■□□□□ 0.16
SQLE-205ENST00000521232 TMEM79Q9BSE2 394 aa16.07■□□□□ 0.16
SQLE-205ENST00000521232 KLHL31Q9H511 634 aa16.07■□□□□ 0.16
SQLE-205ENST00000521232 NT5DC2Q9H857 520 aa16.07■□□□□ 0.16
SQLE-205ENST00000521232 CNOT10Q9H9A5 744 aaKnown RBP16.07■□□□□ 0.16
SQLE-205ENST00000521232 PTBP2Q9UKA9 531 aaKnown RBP16.07■□□□□ 0.16
SQLE-205ENST00000521232 CPAMD8Q8IZJ3 1885 aa16.07■□□□□ 0.16
SQLE-205ENST00000521232 SVILO95425 2214 aa16.07■□□□□ 0.16
SQLE-205ENST00000521232 ESYT3A0FGR9 886 aa16.06■□□□□ 0.16
SQLE-205ENST00000521232 DYTNA2CJ06 578 aa16.06■□□□□ 0.16
SQLE-205ENST00000521232 MAGEB17A8MXT2 336 aa16.06■□□□□ 0.16
SQLE-205ENST00000521232 SEC24DO94855 1032 aaPredicted RBP16.06■□□□□ 0.16
SQLE-205ENST00000521232 FHP07954 510 aa16.06■□□□□ 0.16
SQLE-205ENST00000521232 KCNC1P48547 511 aa16.06■□□□□ 0.16
SQLE-205ENST00000521232 ARG2P78540 354 aa16.06■□□□□ 0.16
SQLE-205ENST00000521232 NR6A1Q15406 480 aa16.06■□□□□ 0.16
SQLE-205ENST00000521232 NSDHLQ15738 373 aa16.06■□□□□ 0.16
SQLE-205ENST00000521232 WHAMMP3Q1A5X7 153 aa16.06■□□□□ 0.16
SQLE-205ENST00000521232 EIF2S3LQ2VIR3 472 aaKnown RBP16.06■□□□□ 0.16
SQLE-205ENST00000521232 TMIGD1Q6UXZ0 262 aa16.06■□□□□ 0.16
SQLE-205ENST00000521232 PDPRQ8NCN5 879 aa16.06■□□□□ 0.16
SQLE-205ENST00000521232 TTLQ8NG68 377 aa16.06■□□□□ 0.16
SQLE-205ENST00000521232 SEC16BQ96JE7 1060 aa16.06■□□□□ 0.16
SQLE-205ENST00000521232 PITHD1Q9GZP4 211 aaPredicted RBP16.06■□□□□ 0.16
SQLE-205ENST00000521232 AICDAQ9GZX7 198 aa16.06■□□□□ 0.16
SQLE-205ENST00000521232 EHD1Q9H4M9 534 aa16.06■□□□□ 0.16
SQLE-205ENST00000521232 AGPAT4Q9NRZ5 378 aa16.06■□□□□ 0.16
SQLE-205ENST00000521232 PLA2G3Q9NZ20 509 aa16.06■□□□□ 0.16
SQLE-205ENST00000521232 ICE1Q9Y2F5 2266 aa16.06■□□□□ 0.16
SQLE-205ENST00000521232 STK16O75716 305 aa16.05■□□□□ 0.16
SQLE-205ENST00000521232 CDC123O75794 336 aaPredicted RBP16.05■□□□□ 0.16
SQLE-205ENST00000521232 SLC35E2BP0CK96 405 aa16.05■□□□□ 0.16
SQLE-205ENST00000521232 GSTM2P28161 218 aa16.05■□□□□ 0.16
SQLE-205ENST00000521232 CRABP2P29373 138 aa16.05■□□□□ 0.16
SQLE-205ENST00000521232 HNF4AP41235 474 aa16.05■□□□□ 0.16
SQLE-205ENST00000521232 TNFSF10P50591 281 aa16.05■□□□□ 0.16
SQLE-205ENST00000521232 RAB8AP61006 207 aa16.05■□□□□ 0.16
SQLE-205ENST00000521232 OLR1P78380 273 aa16.05■□□□□ 0.16
SQLE-205ENST00000521232 ABRAXAS2Q15018 415 aa16.05■□□□□ 0.16
SQLE-205ENST00000521232 H3F3CQ6NXT2 135 aa16.05■□□□□ 0.16
SQLE-205ENST00000521232 RAPH1Q70E73 1250 aa16.05■□□□□ 0.16
SQLE-205ENST00000521232 CMC1Q7Z7K0 106 aa16.05■□□□□ 0.16
SQLE-205ENST00000521232 ISCA2Q86U28 154 aa16.05■□□□□ 0.16
SQLE-205ENST00000521232 ZGRF1Q86YA3 2104 aa16.05■□□□□ 0.16
SQLE-205ENST00000521232 KRT78Q8N1N4 520 aa16.05■□□□□ 0.16
SQLE-205ENST00000521232 OR1N1Q8NGS0 311 aa16.05■□□□□ 0.16
SQLE-205ENST00000521232 STAG3L4Q8TBR4 150 aa16.05■□□□□ 0.16
SQLE-205ENST00000521232 M1APQ8TC57 530 aa16.05■□□□□ 0.16
SQLE-205ENST00000521232 ESAMQ96AP7 390 aa16.05■□□□□ 0.16
SQLE-205ENST00000521232 PSMG3-AS1Q96PY0 264 aa16.05■□□□□ 0.16
SQLE-205ENST00000521232 RBCK1Q9BYM8 510 aa16.05■□□□□ 0.16
SQLE-205ENST00000521232 RNF32Q9H0A6 362 aa16.05■□□□□ 0.16
SQLE-205ENST00000521232 DNAJC11Q9NVH1 559 aa16.05■□□□□ 0.16
SQLE-205ENST00000521232 STMN3Q9NZ72 180 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms