RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	TFEB	P19484	476 aa		22.84	■■□□□ 1.25
CNOT7-204	ENST00000518885	GDF5	P43026	501 aa		22.84	■■□□□ 1.25
CNOT7-204	ENST00000518885	SERPINB8	P50452	374 aa		22.84	■■□□□ 1.25
CNOT7-204	ENST00000518885	INPP5J	Q15735	1006 aa	Predicted RBP	22.84	■■□□□ 1.25
CNOT7-204	ENST00000518885	MROH9	Q5TGP6	573 aa		22.84	■■□□□ 1.25
CNOT7-204	ENST00000518885	IGFL2	Q6UWQ7	119 aa		22.84	■■□□□ 1.25
CNOT7-204	ENST00000518885	LRRC70	Q7Z2Q7	622 aa		22.84	■■□□□ 1.25
CNOT7-204	ENST00000518885	CMC1	Q7Z7K0	106 aa		22.84	■■□□□ 1.25
CNOT7-204	ENST00000518885	PDSS2	Q86YH6	399 aa		22.84	■■□□□ 1.25
CNOT7-204	ENST00000518885	NOA1	Q8NC60	698 aa	Known RBP	22.84	■■□□□ 1.25
CNOT7-204	ENST00000518885	GALNT11	Q8NCW6	608 aa		22.84	■■□□□ 1.25
CNOT7-204	ENST00000518885	EFCAB11	Q9BUY7	163 aa		22.84	■■□□□ 1.25
CNOT7-204	ENST00000518885	NINJ2	Q9NZG7	142 aa		22.84	■■□□□ 1.25
CNOT7-204	ENST00000518885	TEKT2	Q9UIF3	430 aa		22.84	■■□□□ 1.25
CNOT7-204	ENST00000518885	SUPT3H	B4E1H0	165 aa		22.83	■■□□□ 1.25
CNOT7-204	ENST00000518885	MASP2	O00187	686 aa		22.83	■■□□□ 1.25
CNOT7-204	ENST00000518885	PSMD12	O00232	456 aa	Predicted RBP	22.83	■■□□□ 1.25
CNOT7-204	ENST00000518885	KERA	O60938	352 aa		22.83	■■□□□ 1.25
CNOT7-204	ENST00000518885	SUPT3H	O75486	399 aa		22.83	■■□□□ 1.25
CNOT7-204	ENST00000518885	PRR35	P0CG20	571 aa		22.83	■■□□□ 1.25
CNOT7-204	ENST00000518885	HSPA7	P48741	367 aa		22.83	■■□□□ 1.25
CNOT7-204	ENST00000518885	MFAP5	Q13361	173 aa		22.83	■■□□□ 1.25
CNOT7-204	ENST00000518885	SLBP	Q14493	270 aa	Known RBP eCLIP	22.83	■■□□□ 1.25
CNOT7-204	ENST00000518885	EFTUD2	Q15029	972 aa	Known RBP eCLIP	22.83	■■□□□ 1.25	2e-8	■■■■■ 57.6
CNOT7-204	ENST00000518885		Q6ZS92	163 aa		22.83	■■□□□ 1.25
CNOT7-204	ENST00000518885	CPEB2	Q7Z5Q1	589 aa	Known RBP	22.83	■■□□□ 1.25
CNOT7-204	ENST00000518885	ANKRD53	Q8N9V6	530 aa		22.83	■■□□□ 1.25
CNOT7-204	ENST00000518885	RHEBL1	Q8TAI7	183 aa		22.83	■■□□□ 1.25
CNOT7-204	ENST00000518885	UTP15	Q8TED0	518 aa	Known RBP	22.83	■■□□□ 1.25
CNOT7-204	ENST00000518885	EXT2	Q93063	718 aa		22.83	■■□□□ 1.25
CNOT7-204	ENST00000518885	UBE2E3	Q969T4	207 aa		22.83	■■□□□ 1.25
CNOT7-204	ENST00000518885	TBC1D20	Q96BZ9	403 aa		22.83	■■□□□ 1.25
CNOT7-204	ENST00000518885	MRRF	Q96E11	262 aa	Known RBP	22.83	■■□□□ 1.25
CNOT7-204	ENST00000518885	MOCOS	Q96EN8	888 aa		22.83	■■□□□ 1.25
CNOT7-204	ENST00000518885	PTCD3	Q96EY7	689 aa	Known RBP	22.83	■■□□□ 1.25
CNOT7-204	ENST00000518885	PEX11G	Q96HA9	241 aa		22.83	■■□□□ 1.25
CNOT7-204	ENST00000518885	TMEM79	Q9BSE2	394 aa		22.83	■■□□□ 1.25
CNOT7-204	ENST00000518885	SPNS1	Q9H2V7	528 aa		22.83	■■□□□ 1.25
CNOT7-204	ENST00000518885	DMGDH	Q9UI17	866 aa	Known RBP	22.83	■■□□□ 1.25
CNOT7-204	ENST00000518885	PTBP2	Q9UKA9	531 aa	Known RBP	22.83	■■□□□ 1.25
CNOT7-204	ENST00000518885	DYTN	A2CJ06	578 aa		22.82	■■□□□ 1.24
CNOT7-204	ENST00000518885	TAPBP	O15533	448 aa		22.82	■■□□□ 1.24
CNOT7-204	ENST00000518885	CCNT2	O60583	730 aa	Known RBP	22.82	■■□□□ 1.24
CNOT7-204	ENST00000518885	FH	P07954	510 aa		22.82	■■□□□ 1.24
CNOT7-204	ENST00000518885	SERPINB9	P50453	376 aa		22.82	■■□□□ 1.24
CNOT7-204	ENST00000518885		Q0VFX4	171 aa		22.82	■■□□□ 1.24
CNOT7-204	ENST00000518885	XKR6	Q5GH73	641 aa		22.82	■■□□□ 1.24
CNOT7-204	ENST00000518885	ISCA2	Q86U28	154 aa		22.82	■■□□□ 1.24
CNOT7-204	ENST00000518885	DNAJB14	Q8TBM8	379 aa		22.82	■■□□□ 1.24
CNOT7-204	ENST00000518885	CCT6B	Q92526	530 aa		22.82	■■□□□ 1.24
CNOT7-204	ENST00000518885	GAL3ST3	Q96A11	431 aa		22.82	■■□□□ 1.24
CNOT7-204	ENST00000518885	FUT8	Q9BYC5	575 aa		22.82	■■□□□ 1.24
CNOT7-204	ENST00000518885	CD244	Q9BZW8	370 aa		22.82	■■□□□ 1.24
CNOT7-204	ENST00000518885	CDC42EP4	Q9H3Q1	356 aa	Known RBP	22.82	■■□□□ 1.24
CNOT7-204	ENST00000518885	PRM3	Q9NNZ6	103 aa		22.82	■■□□□ 1.24
CNOT7-204	ENST00000518885	COPG2	Q9UBF2	871 aa		22.82	■■□□□ 1.24
CNOT7-204	ENST00000518885	ZNF860	A6NHJ4	632 aa		22.81	■■□□□ 1.24
CNOT7-204	ENST00000518885	MAGEB17	A8MXT2	336 aa		22.81	■■□□□ 1.24
CNOT7-204	ENST00000518885	JRK	O75564	520 aa		22.81	■■□□□ 1.24
CNOT7-204	ENST00000518885	MYBL2	P10244	700 aa		22.81	■■□□□ 1.24
CNOT7-204	ENST00000518885	CNTF	P26441	200 aa		22.81	■■□□□ 1.24
CNOT7-204	ENST00000518885	TYK2	P29597	1187 aa		22.81	■■□□□ 1.24
CNOT7-204	ENST00000518885	HNF4A	P41235	474 aa		22.81	■■□□□ 1.24
CNOT7-204	ENST00000518885	TGM3	Q08188	693 aa		22.81	■■□□□ 1.24
CNOT7-204	ENST00000518885	PCOLCE	Q15113	449 aa		22.81	■■□□□ 1.24
CNOT7-204	ENST00000518885	TLR1	Q15399	786 aa		22.81	■■□□□ 1.24
CNOT7-204	ENST00000518885	NSDHL	Q15738	373 aa		22.81	■■□□□ 1.24
CNOT7-204	ENST00000518885	EXT1	Q16394	746 aa		22.81	■■□□□ 1.24
CNOT7-204	ENST00000518885	C18orf21	Q32NC0	220 aa	Predicted RBP	22.81	■■□□□ 1.24
CNOT7-204	ENST00000518885	PLEKHN1	Q494U1	663 aa	Predicted RBP	22.81	■■□□□ 1.24
CNOT7-204	ENST00000518885	TOR1AIP1	Q5JTV8	583 aa		22.81	■■□□□ 1.24
CNOT7-204	ENST00000518885	B3GNTL1	Q67FW5	361 aa	Predicted RBP	22.81	■■□□□ 1.24
CNOT7-204	ENST00000518885	IFT20	Q8IY31	132 aa		22.81	■■□□□ 1.24
CNOT7-204	ENST00000518885	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	22.81	■■□□□ 1.24
CNOT7-204	ENST00000518885		Q8NA96	180 aa		22.81	■■□□□ 1.24
CNOT7-204	ENST00000518885	PLPP5	Q8NEB5	264 aa		22.81	■■□□□ 1.24
CNOT7-204	ENST00000518885	ARMC2	Q8NEN0	867 aa		22.81	■■□□□ 1.24
CNOT7-204	ENST00000518885	SNX15	Q9NRS6	342 aa		22.81	■■□□□ 1.24
CNOT7-204	ENST00000518885	LUZP4	Q9P127	313 aa		22.81	■■□□□ 1.24
CNOT7-204	ENST00000518885	OPTC	Q9UBM4	332 aa		22.81	■■□□□ 1.24
CNOT7-204	ENST00000518885	CHST10	O43529	356 aa		22.8	■■□□□ 1.24
CNOT7-204	ENST00000518885	CLEC3A	O75596	197 aa		22.8	■■□□□ 1.24
CNOT7-204	ENST00000518885	KRT38	O76015	456 aa		22.8	■■□□□ 1.24
CNOT7-204	ENST00000518885	ACSL3	O95573	720 aa		22.8	■■□□□ 1.24
CNOT7-204	ENST00000518885	RNH1	P13489	461 aa	Known RBP	22.8	■■□□□ 1.24
CNOT7-204	ENST00000518885	RAB8A	P61006	207 aa		22.8	■■□□□ 1.24
CNOT7-204	ENST00000518885	IRF8	Q02556	426 aa		22.8	■■□□□ 1.24
CNOT7-204	ENST00000518885	ACTN3	Q08043	901 aa	Predicted RBP	22.8	■■□□□ 1.24
CNOT7-204	ENST00000518885	ABRAXAS2	Q15018	415 aa		22.8	■■□□□ 1.24
CNOT7-204	ENST00000518885	ACAP2	Q15057	778 aa		22.8	■■□□□ 1.24
CNOT7-204	ENST00000518885	TBCC	Q15814	346 aa		22.8	■■□□□ 1.24
CNOT7-204	ENST00000518885	LINC00696	Q6ZRV3	163 aa		22.8	■■□□□ 1.24
CNOT7-204	ENST00000518885	CNPY4	Q8N129	248 aa		22.8	■■□□□ 1.24
CNOT7-204	ENST00000518885	BRIX1	Q8TDN6	353 aa	Known RBP	22.8	■■□□□ 1.24
CNOT7-204	ENST00000518885	CREB3L4	Q8TEY5	395 aa		22.8	■■□□□ 1.24
CNOT7-204	ENST00000518885	WDR34	Q96EX3	536 aa		22.8	■■□□□ 1.24
CNOT7-204	ENST00000518885	AGPAT4	Q9NRZ5	378 aa		22.8	■■□□□ 1.24
CNOT7-204	ENST00000518885	IGSF5	Q9NSI5	407 aa		22.8	■■□□□ 1.24
CNOT7-204	ENST00000518885	PTGFRN	Q9P2B2	879 aa		22.8	■■□□□ 1.24
CNOT7-204	ENST00000518885		A0A096LPK6	155 aa		22.79	■■□□□ 1.24

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms