RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 ITGA3P26006 1051 aa12.57□□□□□ -0.4
VEGFA-219ENST00000518824 HNRNPH1P31943 449 aaKnown RBP12.57□□□□□ -0.4
VEGFA-219ENST00000518824 CASRP41180 1078 aa12.57□□□□□ -0.4
VEGFA-219ENST00000518824 MSH2P43246 934 aa12.57□□□□□ -0.4
VEGFA-219ENST00000518824 KLRB1Q12918 225 aa12.57□□□□□ -0.4
VEGFA-219ENST00000518824 MYBPC3Q14896 1274 aa12.57□□□□□ -0.4
VEGFA-219ENST00000518824 TUBB8Q3ZCM7 444 aa12.57□□□□□ -0.4
VEGFA-219ENST00000518824 PRR30Q53SZ7 412 aaPredicted RBP12.57□□□□□ -0.4
VEGFA-219ENST00000518824 TMEM205Q6UW68 189 aa12.57□□□□□ -0.4
VEGFA-219ENST00000518824 ATG14Q6ZNE5 492 aa12.57□□□□□ -0.4
VEGFA-219ENST00000518824 TCAIMQ8N3R3 496 aa12.57□□□□□ -0.4
VEGFA-219ENST00000518824 TEX19Q8NA77 164 aa12.57□□□□□ -0.4
VEGFA-219ENST00000518824 Q8NA96 180 aa12.57□□□□□ -0.4
VEGFA-219ENST00000518824 CLEC1AQ8NC01 280 aa12.57□□□□□ -0.4
VEGFA-219ENST00000518824 TSLPQ969D9 159 aa12.57□□□□□ -0.4
VEGFA-219ENST00000518824 TSPYL1Q9H0U9 437 aa12.57□□□□□ -0.4
VEGFA-219ENST00000518824 ATP13A2Q9NQ11 1180 aa12.57□□□□□ -0.4
VEGFA-219ENST00000518824 LANCL2Q9NS86 450 aa12.57□□□□□ -0.4
VEGFA-219ENST00000518824 C14orf105Q9NVL8 296 aa12.57□□□□□ -0.4
VEGFA-219ENST00000518824 GPRC5BQ9NZH0 403 aa12.57□□□□□ -0.4
VEGFA-219ENST00000518824 HELZ2Q9BYK8 2649 aaKnown RBP12.57□□□□□ -0.4
VEGFA-219ENST00000518824 IGHV1-45A0A0A0MS14 117 aa12.56□□□□□ -0.4
VEGFA-219ENST00000518824 FAM227AF5H4B4 570 aa12.56□□□□□ -0.4
VEGFA-219ENST00000518824 SH3BGRLO75368 114 aa12.56□□□□□ -0.4
VEGFA-219ENST00000518824 IPO13O94829 963 aaKnown RBP12.56□□□□□ -0.4
VEGFA-219ENST00000518824 SIX3O95343 332 aaPredicted RBP12.56□□□□□ -0.4
VEGFA-219ENST00000518824 IGHEP01854 428 aa12.56□□□□□ -0.4
VEGFA-219ENST00000518824 S100BP04271 92 aaPredicted RBP12.56□□□□□ -0.4
VEGFA-219ENST00000518824 SBK3P0C264 359 aa12.56□□□□□ -0.4
VEGFA-219ENST00000518824 SOX8P57073 446 aa12.56□□□□□ -0.4
VEGFA-219ENST00000518824 RGS1Q08116 209 aa12.56□□□□□ -0.4
VEGFA-219ENST00000518824 AIMP2Q13155 320 aaKnown RBP12.56□□□□□ -0.4
VEGFA-219ENST00000518824 CHIT1Q13231 466 aa12.56□□□□□ -0.4
VEGFA-219ENST00000518824 SLC29A2Q14542 456 aa12.56□□□□□ -0.4
VEGFA-219ENST00000518824 PCOLCEQ15113 449 aa12.56□□□□□ -0.4
VEGFA-219ENST00000518824 PDK4Q16654 411 aa12.56□□□□□ -0.4
VEGFA-219ENST00000518824 PFKFB4Q16877 469 aa12.56□□□□□ -0.4
VEGFA-219ENST00000518824 MINDY4Q4G0A6 757 aa12.56□□□□□ -0.4
VEGFA-219ENST00000518824 XKR6Q5GH73 641 aa12.56□□□□□ -0.4
VEGFA-219ENST00000518824 MFSD4BQ5TF39 518 aa12.56□□□□□ -0.4
VEGFA-219ENST00000518824 TMIGD1Q6UXZ0 262 aa12.56□□□□□ -0.4
VEGFA-219ENST00000518824 UBTD2Q8WUN7 234 aa12.56□□□□□ -0.4
VEGFA-219ENST00000518824 CCT6BQ92526 530 aa12.56□□□□□ -0.4
VEGFA-219ENST00000518824 WDR34Q96EX3 536 aa12.56□□□□□ -0.4
VEGFA-219ENST00000518824 THOC3Q96J01 351 aaKnown RBP12.56□□□□□ -0.4
VEGFA-219ENST00000518824 CPSF2Q9P2I0 782 aaKnown RBP12.56□□□□□ -0.4
VEGFA-219ENST00000518824 COPG2Q9UBF2 871 aa12.56□□□□□ -0.4
VEGFA-219ENST00000518824 ANAPC2Q9UJX6 822 aa12.56□□□□□ -0.4
VEGFA-219ENST00000518824 ZNF451Q9Y4E5 1061 aa12.56□□□□□ -0.4
VEGFA-219ENST00000518824 LOC102723996A0A087X1L8 192 aa12.55□□□□□ -0.4
VEGFA-219ENST00000518824 EXOC1LA0A1B0GW35 172 aa12.55□□□□□ -0.4
VEGFA-219ENST00000518824 LRIT2A6NDA9 550 aa12.55□□□□□ -0.4
VEGFA-219ENST00000518824 K7EPI3 171 aa12.55□□□□□ -0.4
VEGFA-219ENST00000518824 CLGNO14967 610 aa12.55□□□□□ -0.4
VEGFA-219ENST00000518824 KLK8O60259 260 aa12.55□□□□□ -0.4
VEGFA-219ENST00000518824 H2AFYO75367 372 aaKnown RBP12.55□□□□□ -0.4
VEGFA-219ENST00000518824 WFS1O76024 890 aa12.55□□□□□ -0.4
VEGFA-219ENST00000518824 HPP00738 406 aa12.55□□□□□ -0.4
VEGFA-219ENST00000518824 SHBGP04278 402 aa12.55□□□□□ -0.4
VEGFA-219ENST00000518824 SERPINA6P08185 405 aa12.55□□□□□ -0.4
VEGFA-219ENST00000518824 ABHD2P08910 425 aa12.55□□□□□ -0.4
VEGFA-219ENST00000518824 SERPINB9P50453 376 aa12.55□□□□□ -0.4
VEGFA-219ENST00000518824 BTG2P78543 158 aa12.55□□□□□ -0.4
VEGFA-219ENST00000518824 RHAGQ02094 409 aa12.55□□□□□ -0.4
VEGFA-219ENST00000518824 IRF8Q02556 426 aa12.55□□□□□ -0.4
VEGFA-219ENST00000518824 RUNX2Q13950 521 aa12.55□□□□□ -0.4
VEGFA-219ENST00000518824 HERC3Q15034 1050 aa12.55□□□□□ -0.4
VEGFA-219ENST00000518824 SETDB1Q15047 1291 aa12.55□□□□□ -0.4
VEGFA-219ENST00000518824 ACAP2Q15057 778 aa12.55□□□□□ -0.4
VEGFA-219ENST00000518824 FAM83EQ2M2I3 478 aa12.55□□□□□ -0.4
VEGFA-219ENST00000518824 VWA5B1Q5TIE3 1220 aa12.55□□□□□ -0.4
VEGFA-219ENST00000518824 SLC6A19Q695T7 634 aa12.55□□□□□ -0.4
VEGFA-219ENST00000518824 RPS27LQ71UM5 84 aaKnown RBP12.55□□□□□ -0.4
VEGFA-219ENST00000518824 LRRC70Q7Z2Q7 622 aa12.55□□□□□ -0.4
VEGFA-219ENST00000518824 TBC1D19Q8N5T2 526 aa12.55□□□□□ -0.4
VEGFA-219ENST00000518824 TEX9Q8N6V9 391 aa12.55□□□□□ -0.4
VEGFA-219ENST00000518824 TRPV3Q8NET8 790 aa12.55□□□□□ -0.4
VEGFA-219ENST00000518824 RHEBL1Q8TAI7 183 aa12.55□□□□□ -0.4
VEGFA-219ENST00000518824 PSMF1Q92530 271 aa12.55□□□□□ -0.4
VEGFA-219ENST00000518824 NACC2Q96BF6 587 aa12.55□□□□□ -0.4
VEGFA-219ENST00000518824 MS4A6EQ96DS6 147 aa12.55□□□□□ -0.4
VEGFA-219ENST00000518824 QRFPRQ96P65 431 aa12.55□□□□□ -0.4
VEGFA-219ENST00000518824 WDR77Q9BQA1 342 aaPredicted RBP12.55□□□□□ -0.4
VEGFA-219ENST00000518824 NT5DC2Q9H857 520 aa12.55□□□□□ -0.4
VEGFA-219ENST00000518824 ANKZF1Q9H8Y5 726 aa12.55□□□□□ -0.4
VEGFA-219ENST00000518824 CNOT10Q9H9A5 744 aaKnown RBP12.55□□□□□ -0.4
VEGFA-219ENST00000518824 ZNF180Q9UJW8 692 aa12.55□□□□□ -0.4
VEGFA-219ENST00000518824 PLAAQ9Y263 795 aa12.55□□□□□ -0.4
VEGFA-219ENST00000518824 NSG1A0A0A6YYJ2 146 aa12.54□□□□□ -0.4
VEGFA-219ENST00000518824 A0A1W2PQ72 361 aa12.54□□□□□ -0.4
VEGFA-219ENST00000518824 B4GALT2O60909 372 aa12.54□□□□□ -0.4
VEGFA-219ENST00000518824 SEC24DO94855 1032 aaPredicted RBP12.54□□□□□ -0.4
VEGFA-219ENST00000518824 SORBS2O94875 1100 aaKnown RBP12.54□□□□□ -0.4
VEGFA-219ENST00000518824 C8orf89P0DMQ9 161 aa12.54□□□□□ -0.4
VEGFA-219ENST00000518824 ITGAMP11215 1152 aa12.54□□□□□ -0.4
VEGFA-219ENST00000518824 GFAPP14136 432 aa12.54□□□□□ -0.4
VEGFA-219ENST00000518824 ST13P50502 369 aaKnown RBP12.54□□□□□ -0.4
VEGFA-219ENST00000518824 HNRNPFP52597 415 aaKnown RBP12.54□□□□□ -0.4
VEGFA-219ENST00000518824 BTN3A2P78410 334 aa12.54□□□□□ -0.4
VEGFA-219ENST00000518824 E2F2Q14209 437 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms