RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 YDJCA8MPS7 323 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 MPTX1A8MV57 137 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 H7C423 109 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 SLC1A7O00341 560 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 NDC80O14777 642 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 PSMA7O14818 248 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 SELENOFO60613 162 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 CYTIPO60759 359 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 CLDN1O95832 211 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 IGHEP01854 428 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 TRIM49P0CI25 452 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 TRIM49CP0CI26 452 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 KRT13P13646 458 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 GLULP15104 373 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 RPS2P15880 293 aaKnown RBP3.14□□□□□ -1.91
VPS13B-207ENST00000518569 DPEP1P16444 411 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 RBMS1P29558 406 aaKnown RBP3.14□□□□□ -1.91
VPS13B-207ENST00000518569 DUTP33316 252 aaKnown RBP3.14□□□□□ -1.91
VPS13B-207ENST00000518569 MMP12P39900 470 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 CD151P48509 253 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 TRPC1P48995 793 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 EVCP57679 992 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 BPIFB3P59826 476 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 HILS1P60008 231 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 IRX4P78413 519 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 COX10Q12887 443 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 MRPL28Q13084 256 aaKnown RBP3.14□□□□□ -1.91
VPS13B-207ENST00000518569 PPP2R5CQ13362 524 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 PTK6Q13882 451 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 ZRANB3Q5FWF4 1079 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 SLC10A5Q5PT55 438 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 ZNF497Q6ZNH5 498 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 RAPH1Q70E73 1250 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 RUFY3Q7L099 469 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 CATSPERDQ86XM0 798 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 MEX3DQ86XN8 651 aaKnown RBP3.14□□□□□ -1.91
VPS13B-207ENST00000518569 NUP37Q8NFH4 326 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 GTF3AQ92664 365 aaKnown RBP3.14□□□□□ -1.91
VPS13B-207ENST00000518569 RBM41Q96IZ5 413 aaKnown RBP3.14□□□□□ -1.91
VPS13B-207ENST00000518569 C2orf48Q96LS8 159 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 CCDC43Q96MW1 224 aaKnown RBP3.14□□□□□ -1.91
VPS13B-207ENST00000518569 ZNF599Q96NL3 588 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 SYT11Q9BT88 431 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 PI4K2AQ9BTU6 479 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 HACD3Q9P035 362 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 VPS18Q9P253 973 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 LEF1Q9UJU2 399 aaPredicted RBP3.14□□□□□ -1.91
VPS13B-207ENST00000518569 ITGA11Q9UKX5 1188 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 RUVBL2Q9Y230 463 aaKnown RBP3.14□□□□□ -1.91
VPS13B-207ENST00000518569 KIF3AQ9Y496 699 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 WIPI2Q9Y4P8 454 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 CSNK1G3Q9Y6M4 447 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 WDR62O43379 1518 aa3.14□□□□□ -1.91
VPS13B-207ENST00000518569 SPATA31D1Q6ZQQ2 1576 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 LOC105371242A0A075B767 164 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 MEX3AA1L020 520 aaKnown RBP3.13□□□□□ -1.91
VPS13B-207ENST00000518569 ILVBLA1L0T0 632 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 ERICH4A6NGS2 130 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 PRSS46E5RG02 174 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 STX6O43752 255 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 SAP30O75446 220 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 RLN1P04808 185 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 ANKRD34CP0C6C1 535 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 ZSCAN5DPP0CG00 497 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 THEGLP0DJG4 465 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 LBPP18428 481 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 MUTP22033 750 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 PRKACGP22612 351 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 TMEM50BP56557 158 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 AKAP17AQ02040 695 aaKnown RBP3.13□□□□□ -1.91
VPS13B-207ENST00000518569 UBXN1Q04323 297 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 LRRC74AQ0VAA2 488 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 MTF1Q14872 753 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 TAF7Q15545 349 aaPredicted RBP3.13□□□□□ -1.91
VPS13B-207ENST00000518569 DUSP5Q16690 384 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 FASTKD1Q53R41 847 aaKnown RBP3.13□□□□□ -1.91
VPS13B-207ENST00000518569 CASC4Q6P4E1 433 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 C16orf87Q6PH81 154 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 METTL7BQ6UX53 244 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 FRRS1Q6ZNA5 592 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 MCM10Q7L590 875 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 CHMP1BQ7LBR1 199 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 COX8CQ7Z4L0 72 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 LRRTM1Q86UE6 522 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 NLRP14Q86W24 1093 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 ANKRD46Q86W74 232 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 UNC45BQ8IWX7 931 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 IQCF2Q8IXL9 164 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 AMER3Q8N944 861 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 NHLRC2Q8NBF2 726 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 PRSS33Q8NF86 280 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 GOT1L1Q8NHS2 421 aaPredicted RBP3.13□□□□□ -1.91
VPS13B-207ENST00000518569 ZNF519Q8TB69 540 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 MGARPQ8TDB4 240 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.13□□□□□ -1.91
VPS13B-207ENST00000518569 CTNNBL1Q8WYA6 563 aaPredicted RBP3.13□□□□□ -1.91
VPS13B-207ENST00000518569 TAF4BQ92750 862 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 CASP10Q92851 521 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 OMA1Q96E52 524 aa3.13□□□□□ -1.91
VPS13B-207ENST00000518569 SGF29Q96ES7 293 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms