RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 BST1Q10588 318 aa12.37□□□□□ -0.43
PABPC1-205ENST00000518196 MUM1Q2TAK8 710 aa12.37□□□□□ -0.43
PABPC1-205ENST00000518196 HKDC1Q2TB90 917 aa12.37□□□□□ -0.43
PABPC1-205ENST00000518196 PRTGQ2VWP7 1150 aa12.37□□□□□ -0.43
PABPC1-205ENST00000518196 GARNL3Q5VVW2 1013 aa12.37□□□□□ -0.43
PABPC1-205ENST00000518196 PWWP2BQ6NUJ5 590 aa12.37□□□□□ -0.43
PABPC1-205ENST00000518196 CHSY3Q70JA7 882 aa12.37□□□□□ -0.43
PABPC1-205ENST00000518196 AFAP1L2Q8N4X5 818 aa12.37□□□□□ -0.43
PABPC1-205ENST00000518196 HUS1BQ8NHY5 278 aa12.37□□□□□ -0.43
PABPC1-205ENST00000518196 WDR20Q8TBZ3 569 aa12.37□□□□□ -0.43
PABPC1-205ENST00000518196 NT5CQ8TCD5 201 aa12.37□□□□□ -0.43
PABPC1-205ENST00000518196 CREB3L4Q8TEY5 395 aa12.37□□□□□ -0.43
PABPC1-205ENST00000518196 ZNF473Q8WTR7 871 aaKnown RBP12.37□□□□□ -0.43
PABPC1-205ENST00000518196 SELENOMQ8WWX9 145 aa12.37□□□□□ -0.43
PABPC1-205ENST00000518196 NXPE2Q96DL1 559 aa12.37□□□□□ -0.43
PABPC1-205ENST00000518196 MTFMTQ96DP5 389 aaKnown RBP12.37□□□□□ -0.43
PABPC1-205ENST00000518196 CMTM7Q96FZ5 175 aa12.37□□□□□ -0.43
PABPC1-205ENST00000518196 SLC46A1Q96NT5 459 aa12.37□□□□□ -0.43
PABPC1-205ENST00000518196 ILKAPQ9H0C8 392 aaPredicted RBP12.37□□□□□ -0.43
PABPC1-205ENST00000518196 ACTR5Q9H9F9 607 aaPredicted RBP12.37□□□□□ -0.43
PABPC1-205ENST00000518196 CUTCQ9NTM9 273 aa12.37□□□□□ -0.43
PABPC1-205ENST00000518196 TXLNGQ9NUQ3 528 aa12.37□□□□□ -0.43
PABPC1-205ENST00000518196 PSD3Q9NYI0 1048 aa12.37□□□□□ -0.43
PABPC1-205ENST00000518196 WASF3Q9UPY6 502 aa12.37□□□□□ -0.43
PABPC1-205ENST00000518196 RUVBL1Q9Y265 456 aaKnown RBP12.37□□□□□ -0.43
PABPC1-205ENST00000518196 MSRB2Q9Y3D2 182 aa12.37□□□□□ -0.43
PABPC1-205ENST00000518196 RAP2CQ9Y3L5 183 aa12.37□□□□□ -0.43
PABPC1-205ENST00000518196 TRAF6Q9Y4K3 522 aa12.37□□□□□ -0.43
PABPC1-205ENST00000518196 TIMM22Q9Y584 194 aa12.37□□□□□ -0.43
PABPC1-205ENST00000518196 B3GALT1Q9Y5Z6 326 aa12.37□□□□□ -0.43
PABPC1-205ENST00000518196 H3BMH7 237 aa12.36□□□□□ -0.43
PABPC1-205ENST00000518196 MANBAO00462 879 aa12.36□□□□□ -0.43
PABPC1-205ENST00000518196 P2RX6O15547 441 aa12.36□□□□□ -0.43
PABPC1-205ENST00000518196 CPNE3O75131 537 aaKnown RBP12.36□□□□□ -0.43
PABPC1-205ENST00000518196 LYPLA1O75608 230 aaPredicted RBP12.36□□□□□ -0.43
PABPC1-205ENST00000518196 STATHP02808 62 aa12.36□□□□□ -0.43
PABPC1-205ENST00000518196 FGF4P08620 206 aa12.36□□□□□ -0.43
PABPC1-205ENST00000518196 HSD3B1P14060 373 aa12.36□□□□□ -0.43
PABPC1-205ENST00000518196 PTX3P26022 381 aaPredicted RBP12.36□□□□□ -0.43
PABPC1-205ENST00000518196 HSD3B2P26439 372 aa12.36□□□□□ -0.43
PABPC1-205ENST00000518196 NEK2P51955 445 aa12.36□□□□□ -0.43
PABPC1-205ENST00000518196 ZNF33BQ06732 778 aa12.36□□□□□ -0.43
PABPC1-205ENST00000518196 TGM3Q08188 693 aa12.36□□□□□ -0.43
PABPC1-205ENST00000518196 SGO1Q5FBB7 561 aa12.36□□□□□ -0.43
PABPC1-205ENST00000518196 TOR1AIP1Q5JTV8 583 aa12.36□□□□□ -0.43
PABPC1-205ENST00000518196 SH2D4BQ5SQS7 431 aa12.36□□□□□ -0.43
PABPC1-205ENST00000518196 SRFBP1Q8NEF9 429 aaKnown RBP12.36□□□□□ -0.43
PABPC1-205ENST00000518196 CKAP2Q8WWK9 683 aa12.36□□□□□ -0.43
PABPC1-205ENST00000518196 CLIP3Q96DZ5 547 aa12.36□□□□□ -0.43
PABPC1-205ENST00000518196 MAGEB18Q96M61 343 aa12.36□□□□□ -0.43
PABPC1-205ENST00000518196 KCNA7Q96RP8 456 aa12.36□□□□□ -0.43
PABPC1-205ENST00000518196 MTERF1Q99551 399 aaKnown RBP12.36□□□□□ -0.43
PABPC1-205ENST00000518196 SERPINI1Q99574 410 aa12.36□□□□□ -0.43
PABPC1-205ENST00000518196 MACROD1Q9BQ69 325 aa12.36□□□□□ -0.43
PABPC1-205ENST00000518196 CENPKQ9BS16 269 aa12.36□□□□□ -0.43
PABPC1-205ENST00000518196 ULBP3Q9BZM4 244 aa12.36□□□□□ -0.43
PABPC1-205ENST00000518196 SYNPO2LQ9H987 977 aa12.36□□□□□ -0.43
PABPC1-205ENST00000518196 BRF2Q9HAW0 419 aa12.36□□□□□ -0.43
PABPC1-205ENST00000518196 DMRT3Q9NQL9 472 aa12.36□□□□□ -0.43
PABPC1-205ENST00000518196 NMRK1Q9NWW6 199 aa12.36□□□□□ -0.43
PABPC1-205ENST00000518196 ZDHHC2Q9UIJ5 367 aa12.36□□□□□ -0.43
PABPC1-205ENST00000518196 FIS1Q9Y3D6 152 aa12.36□□□□□ -0.43
PABPC1-205ENST00000518196 PCDHGA7Q9Y5G6 932 aa12.36□□□□□ -0.43
PABPC1-205ENST00000518196 MAGEB17A8MXT2 336 aa12.35□□□□□ -0.43
PABPC1-205ENST00000518196 C9orf172C9J069 976 aa12.35□□□□□ -0.43
PABPC1-205ENST00000518196 DSCR3O14972 297 aa12.35□□□□□ -0.43
PABPC1-205ENST00000518196 SNNO75324 88 aaPredicted RBP12.35□□□□□ -0.43
PABPC1-205ENST00000518196 KIAA0754O94854 1291 aa12.35□□□□□ -0.43
PABPC1-205ENST00000518196 TIAF1O95411 115 aa12.35□□□□□ -0.43
PABPC1-205ENST00000518196 TGFB1P01137 390 aa12.35□□□□□ -0.43
PABPC1-205ENST00000518196 PDYNP01213 254 aa12.35□□□□□ -0.43
PABPC1-205ENST00000518196 NTRK1P04629 796 aa12.35□□□□□ -0.43
PABPC1-205ENST00000518196 ALAS2P22557 587 aa12.35□□□□□ -0.43
PABPC1-205ENST00000518196 CD82P27701 267 aa12.35□□□□□ -0.43
PABPC1-205ENST00000518196 SLC5A2P31639 672 aa12.35□□□□□ -0.43
PABPC1-205ENST00000518196 FOXA1P55317 472 aa12.35□□□□□ -0.43
PABPC1-205ENST00000518196 RPS13P62277 151 aaKnown RBP12.35□□□□□ -0.43
PABPC1-205ENST00000518196 SKP1P63208 163 aa12.35□□□□□ -0.43
PABPC1-205ENST00000518196 RELBQ01201 579 aa12.35□□□□□ -0.43
PABPC1-205ENST00000518196 HERC3Q15034 1050 aa12.35□□□□□ -0.43
PABPC1-205ENST00000518196 TMEM35AQ53FP2 167 aa12.35□□□□□ -0.43
PABPC1-205ENST00000518196 PRAMEF17Q5VTA0 474 aa12.35□□□□□ -0.43
PABPC1-205ENST00000518196 CES4AQ5XG92 561 aa12.35□□□□□ -0.43
PABPC1-205ENST00000518196 KANK2Q63ZY3 851 aa12.35□□□□□ -0.43
PABPC1-205ENST00000518196 CLEC6AQ6EIG7 209 aa12.35□□□□□ -0.43
PABPC1-205ENST00000518196 RHBDD2Q6NTF9 364 aa12.35□□□□□ -0.43
PABPC1-205ENST00000518196 NIPAL1Q6NVV3 410 aa12.35□□□□□ -0.43
PABPC1-205ENST00000518196 TTLL10Q6ZVT0 673 aa12.35□□□□□ -0.43
PABPC1-205ENST00000518196 ABHD13Q7L211 337 aa12.35□□□□□ -0.43
PABPC1-205ENST00000518196 ERMP1Q7Z2K6 904 aa12.35□□□□□ -0.43
PABPC1-205ENST00000518196 VN1R5Q7Z5H4 357 aa12.35□□□□□ -0.43
PABPC1-205ENST00000518196 GBP7Q8N8V2 638 aaPredicted RBP12.35□□□□□ -0.43
PABPC1-205ENST00000518196 KCT2Q8NC54 265 aa12.35□□□□□ -0.43
PABPC1-205ENST00000518196 ZCCHC10Q8TBK6 192 aa12.35□□□□□ -0.43
PABPC1-205ENST00000518196 PMEPA1Q969W9 287 aa12.35□□□□□ -0.43
PABPC1-205ENST00000518196 FAR2Q96K12 515 aa12.35□□□□□ -0.43
PABPC1-205ENST00000518196 MS4A8Q9BY19 250 aa12.35□□□□□ -0.43
PABPC1-205ENST00000518196 REXO4Q9GZR2 422 aaKnown RBP12.35□□□□□ -0.43
PABPC1-205ENST00000518196 ZNF395Q9H8N7 513 aaPredicted RBP12.35□□□□□ -0.43
PABPC1-205ENST00000518196 TNFRSF12AQ9NP84 129 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms