RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 C9P02748 559 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 OR2T7P0C7T2 308 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 CCDC192P0DO97 292 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 SPP1P10451 314 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 CYP11B2P19099 503 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 ALDH4A1P30038 563 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 CHRNB4P30926 498 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 KCNJ1P48048 391 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 SLC9A3P48764 834 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 ADARP55265 1226 aaKnown RBP2.89□□□□□ -1.95
HERC4-215ENST00000515753 NME5P56597 212 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 UBASH3AP57075 661 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 PTENP60484 403 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 HNRNPKP61978 463 aaKnown RBP eCLIP2.89□□□□□ -1.95
HERC4-215ENST00000515753 RPS18P62269 152 aaKnown RBP2.89□□□□□ -1.95
HERC4-215ENST00000515753 KLHL30Q0D2K2 578 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 TNK1Q13470 666 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 TRA2AQ13595 282 aaKnown RBP eCLIP2.89□□□□□ -1.95
HERC4-215ENST00000515753 ITGA9Q13797 1035 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 GAMTQ14353 236 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 PDK1Q15118 436 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 LRRC73Q5JTD7 316 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 NEK5Q6P3R8 708 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 FIGLAQ6QHK4 219 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 CRYBG2Q8N1P7 616 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 CCDC110Q8TBZ0 833 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 SPATA18Q8TC71 538 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 KIAA1524Q8TCG1 905 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 PRCCQ92733 491 aaPredicted RBP2.89□□□□□ -1.95
HERC4-215ENST00000515753 DAZLQ92904 295 aaKnown RBP2.89□□□□□ -1.95
HERC4-215ENST00000515753 ST6GALNAC6Q969X2 333 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 MTERF3Q96E29 417 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 OTUB1Q96FW1 271 aaPredicted RBP2.89□□□□□ -1.95
HERC4-215ENST00000515753 BSCL2Q96G97 398 aaPredicted RBP2.89□□□□□ -1.95
HERC4-215ENST00000515753 SFXN2Q96NB2 322 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 OR6C1Q96RD1 312 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 GTPBP2Q9BX10 602 aaKnown RBP2.89□□□□□ -1.95
HERC4-215ENST00000515753 ARRDC1-AS1Q9H2J1 176 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 YTHDC2Q9H6S0 1430 aaKnown RBP2.89□□□□□ -1.95
HERC4-215ENST00000515753 SRD5A3Q9H8P0 318 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 PNPLA3Q9NST1 481 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 DNAJC11Q9NVH1 559 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 NPAP1Q9NZP6 1156 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 TBC1D7Q9P0N9 293 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 TBK1Q9UHD2 729 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 MAD2L2Q9UI95 211 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 SLC7A7Q9UM01 511 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 DUSP12Q9UNI6 340 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 AURKCQ9UQB9 309 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 ITM2BQ9Y287 266 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 SPIN1Q9Y657 262 aaPredicted RBP2.89□□□□□ -1.95
HERC4-215ENST00000515753 PXDNQ92626 1479 aa2.89□□□□□ -1.95
HERC4-215ENST00000515753 NINLQ9Y2I6 1382 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.88□□□□□ -1.95
HERC4-215ENST00000515753 CDC42BPGQ6DT37 1551 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 PRSS51A0A1B0GVH4 220 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 A0A1W2PRB8 838 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 TMEM221A6NGB7 291 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 KBTBD13C9JR72 458 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 K7EPI3 171 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 CACNB4O00305 520 aaPredicted RBP2.88□□□□□ -1.95
HERC4-215ENST00000515753 NR5A2O00482 541 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 MPHOSPH10O00566 681 aaKnown RBP2.88□□□□□ -1.95
HERC4-215ENST00000515753 RASGRF2O14827 1237 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 TTI1O43156 1089 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 OR10H2O60403 315 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 RNASEH1O60930 286 aaKnown RBP2.88□□□□□ -1.95
HERC4-215ENST00000515753 FCGR3BO75015 233 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 CRCPO75575 148 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 PRDM1O75626 825 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 RAD51DO75771 328 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 ABHD2P08910 425 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 SAGP10523 405 aaPredicted RBP2.88□□□□□ -1.95
HERC4-215ENST00000515753 MYL6BP14649 208 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 TCF4P15884 667 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 CCND3P30281 292 aaPredicted RBP2.88□□□□□ -1.95
HERC4-215ENST00000515753 SLC6A6P31641 620 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 GABRA5P31644 462 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 ACAA2P42765 397 aaKnown RBP2.88□□□□□ -1.95
HERC4-215ENST00000515753 ASMTP46597 345 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 IER3P46695 156 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 LHX1P48742 406 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 RGS7P49802 495 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 SLC26A5P58743 744 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 POLR2LP62875 67 aaKnown RBP2.88□□□□□ -1.95
HERC4-215ENST00000515753 DLK1P80370 383 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 TRIM29Q14134 588 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 WSCD2Q2TBF2 565 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 ANKDD1AQ495B1 522 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 IQCCQ4KMZ1 466 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 ZC2HC1BQ5TFG8 222 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 ALS2CLQ60I27 953 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 RBM43Q6ZSC3 357 aaKnown RBP2.88□□□□□ -1.95
HERC4-215ENST00000515753 PPP1R42Q7Z4L9 355 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 ZNF410Q86VK4 478 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 FAM219AQ8IW50 185 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 CCDC83Q8IWF9 413 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 TBC1D21Q8IYX1 336 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 KDM8Q8N371 416 aa2.88□□□□□ -1.95
HERC4-215ENST00000515753 FBXO30Q8TB52 745 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms