RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 ITPKBP27987 946 aa12.71□□□□□ -0.37
TCOF1-213ENST00000514442 AKT2P31751 481 aa12.71□□□□□ -0.37
TCOF1-213ENST00000514442 PREPP48147 710 aa12.71□□□□□ -0.37
TCOF1-213ENST00000514442 DGKQP52824 942 aa12.71□□□□□ -0.37
TCOF1-213ENST00000514442 UFM1P61960 85 aa12.71□□□□□ -0.37
TCOF1-213ENST00000514442 OR4F6Q8NGB9 312 aa12.71□□□□□ -0.37
TCOF1-213ENST00000514442 OVCA2Q8WZ82 227 aa12.71□□□□□ -0.37
TCOF1-213ENST00000514442 KXD1Q9BQD3 176 aa12.71□□□□□ -0.37
TCOF1-213ENST00000514442 SPATA9Q9BWV2 254 aa12.71□□□□□ -0.37
TCOF1-213ENST00000514442 LMAN2LQ9H0V9 348 aa12.71□□□□□ -0.37
TCOF1-213ENST00000514442 MRPS30Q9NP92 439 aaKnown RBP12.71□□□□□ -0.37
TCOF1-213ENST00000514442 NLE1Q9NVX2 485 aaPredicted RBP12.71□□□□□ -0.37
TCOF1-213ENST00000514442 RUVBL1Q9Y265 456 aaKnown RBP12.71□□□□□ -0.37
TCOF1-213ENST00000514442 FADS2P1A8MWK0 482 aa12.71□□□□□ -0.38
TCOF1-213ENST00000514442 PCDH7O60245 1069 aa12.71□□□□□ -0.38
TCOF1-213ENST00000514442 TAGLNQ01995 201 aaKnown RBP12.71□□□□□ -0.38
TCOF1-213ENST00000514442 GOLGA7Q7Z5G4 137 aa12.71□□□□□ -0.38
TCOF1-213ENST00000514442 METTL4Q8N3J2 472 aa12.71□□□□□ -0.38
TCOF1-213ENST00000514442 C11orf65Q8NCR3 313 aa12.71□□□□□ -0.38
TCOF1-213ENST00000514442 GALNT11Q8NCW6 608 aa12.71□□□□□ -0.38
TCOF1-213ENST00000514442 SETD6Q8TBK2 473 aa12.71□□□□□ -0.38
TCOF1-213ENST00000514442 DNASE1L2Q92874 299 aa12.71□□□□□ -0.38
TCOF1-213ENST00000514442 IMP4Q96G21 291 aaKnown RBP12.71□□□□□ -0.38
TCOF1-213ENST00000514442 ZDHHC4Q9NPG8 344 aa12.71□□□□□ -0.38
TCOF1-213ENST00000514442 FBXL12Q9NXK8 326 aa12.71□□□□□ -0.38
TCOF1-213ENST00000514442 NUFIP1Q9UHK0 495 aaKnown RBP12.71□□□□□ -0.38
TCOF1-213ENST00000514442 PLAGL1Q9UM63 463 aa12.71□□□□□ -0.38
TCOF1-213ENST00000514442 CORINQ9Y5Q5 1042 aa12.71□□□□□ -0.38
TCOF1-213ENST00000514442 ARHGEF33A8MVX0 844 aa12.71□□□□□ -0.38
TCOF1-213ENST00000514442 K7ERQ8 282 aa12.71□□□□□ -0.38
TCOF1-213ENST00000514442 DFNA5O60443 496 aa12.71□□□□□ -0.38
TCOF1-213ENST00000514442 POP7O75817 140 aaKnown RBP12.71□□□□□ -0.38
TCOF1-213ENST00000514442 IDUAP35475 653 aa12.71□□□□□ -0.38
TCOF1-213ENST00000514442 C1QTNF8P60827 252 aa12.71□□□□□ -0.38
TCOF1-213ENST00000514442 GPRC6AQ5T6X5 926 aa12.71□□□□□ -0.38
TCOF1-213ENST00000514442 SPRED1Q7Z699 444 aa12.71□□□□□ -0.38
TCOF1-213ENST00000514442 LACC1Q8IV20 430 aa12.71□□□□□ -0.38
TCOF1-213ENST00000514442 UMODL1-AS1Q8N2C9 162 aa12.71□□□□□ -0.38
TCOF1-213ENST00000514442 SCAMP4Q969E2 229 aa12.71□□□□□ -0.38
TCOF1-213ENST00000514442 HSPE1-MOB4S4R3N1 261 aa12.71□□□□□ -0.38
TCOF1-213ENST00000514442 ANKRD36CQ5JPF3 1778 aa12.71□□□□□ -0.38
TCOF1-213ENST00000514442 IRGMA1A4Y4 181 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 LOC730098B7Z3J9 87 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 ZNF806P0C7X5 589 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 OXTRP30559 389 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 AGTR2P50052 363 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 SLC9A5Q14940 896 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 ZNF648Q5T619 568 aaPredicted RBP12.7□□□□□ -0.38
TCOF1-213ENST00000514442 LINC00299Q6ZSB3 139 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 GALNT7Q86SF2 657 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 LAPTM4BQ86VI4 370 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 MEIOBQ8N635 442 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 SRFBP1Q8NEF9 429 aaKnown RBP12.7□□□□□ -0.38
TCOF1-213ENST00000514442 HYLS1Q96M11 299 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 DUSP26Q9BV47 211 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 RANBP3Q9H6Z4 567 aaPredicted RBP12.7□□□□□ -0.38
TCOF1-213ENST00000514442 ADAMDEC1O15204 470 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 TPST2O60704 377 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 LEFTY1O75610 366 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 DEFA5Q01523 94 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 TUBB3Q13509 450 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 SEMA3AQ14563 771 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 TNFAIP8L2Q6P589 184 aaPredicted RBP12.7□□□□□ -0.38
TCOF1-213ENST00000514442 SORCS1Q8WY21 1168 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 KCNC2Q96PR1 638 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 TAS2R7Q9NYW3 318 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 KCNK6Q9Y257 313 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 OAZ2O95190 189 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 POU2F1P14859 743 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 FPR1P21462 350 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 RING1Q06587 406 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 LRRC32Q14392 662 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 PYURFQ96I23 114 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 GSDMCQ9BYG8 508 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 PPIL3Q9H2H8 161 aaKnown RBP12.7□□□□□ -0.38
TCOF1-213ENST00000514442 SLC32A1Q9H598 525 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 PAK6Q9NQU5 681 aaPredicted RBP12.7□□□□□ -0.38
TCOF1-213ENST00000514442 ACTL7AQ9Y615 435 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 SLC25A12O75746 678 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 AGXTP21549 392 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 HNF1BP35680 557 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 NUP62P37198 522 aaPredicted RBP12.7□□□□□ -0.38
TCOF1-213ENST00000514442 DGKEP52429 567 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 LBX1P52954 281 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 GMFBP60983 142 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 CYBRD1Q53TN4 286 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 FAM92BQ6ZTR7 304 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 BEND5Q7L4P6 421 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 ZMIZ2Q8NF64 920 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 RTP4Q96DX8 246 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 C11orf24Q96F05 449 aaPredicted RBP12.7□□□□□ -0.38
TCOF1-213ENST00000514442 ZNF514Q96K75 400 aaPredicted RBP12.7□□□□□ -0.38
TCOF1-213ENST00000514442 NFKBIL1Q9UBC1 381 aaPredicted RBP12.7□□□□□ -0.38
TCOF1-213ENST00000514442 TAC3Q9UHF0 121 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 MKL2Q9ULH7 1088 aa12.7□□□□□ -0.38
TCOF1-213ENST00000514442 PPIEQ9UNP9 301 aaKnown RBP12.7□□□□□ -0.38
TCOF1-213ENST00000514442 RHPN2P1A8MT19 583 aa12.69□□□□□ -0.38
TCOF1-213ENST00000514442 KDM4BO94953 1096 aa12.69□□□□□ -0.38
TCOF1-213ENST00000514442 PRG2P13727 222 aa12.69□□□□□ -0.38
TCOF1-213ENST00000514442 IQCCQ4KMZ1 466 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms