RNA–Protein interactions for RNA: ENST00000514096.5

LIMCH1-219, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 3,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-219ENST00000514096 D6RAR5 112 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 E9PBE3 544 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 ASNA1O43681 348 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 CDC123O75794 336 aaPredicted RBP7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 EBLN1P0CF75 366 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 PCSK6P29122 969 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 ADRA1AP35348 466 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 SLC1A2P43004 574 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 ESRRGP62508 458 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 TRIP10Q15642 601 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 TAZQ16635 292 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 PROX2Q3B8N5 592 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 FAM219BQ5XKK7 198 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 C3orf62Q6ZUJ4 267 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 ERMP1Q7Z2K6 904 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 ACTRT2Q8TDY3 377 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 EXTL1Q92935 676 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 MR1Q95460 341 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 SLC30A3Q99726 388 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 NEURL2Q9BR09 285 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 WACQ9BTA9 647 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 EPS8L2Q9H6S3 715 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 SPHK1Q9NYA1 384 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 MOCS1Q9NZB8 636 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 ARL2BPQ9Y2Y0 163 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 ENTPD2Q9Y5L3 495 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 MED13Q9UHV7 2174 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 MGAT4DA6NG13 374 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 ZNF860A6NHJ4 632 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 B8ZZF3 427 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 hCG_2039718K7EN88 272 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 GAPDHSO14556 408 aaPredicted RBP7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 CTSBP07858 339 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 CTRB1P17538 263 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 ACRV1P26436 265 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 MAP4P27816 1152 aaKnown RBP7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 CCR7P32248 378 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 RPL5P46777 297 aaKnown RBP7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 KPNA2P52292 529 aaKnown RBP7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 ZNF140P52738 457 aaPredicted RBP7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 RPL26P61254 145 aaKnown RBP7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 XIAPP98170 497 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 IL1RL1Q01638 556 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 EFR3AQ14156 821 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 CTRB2Q6GPI1 263 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 ADAMTSL4Q6UY14 1074 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 ZNF574Q6ZN55 896 aaPredicted RBP7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 Q6ZNX1 250 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 TMEM26Q6ZUK4 368 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 ZNF534Q76KX8 674 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 OOSP2Q86WS3 158 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 DOK4Q8TEW6 326 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 ADAMTS14Q8WXS8 1223 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 HTRA1Q92743 480 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 CCDC124Q96CT7 223 aaKnown RBP7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 TINAGL1Q9GZM7 467 aaPredicted RBP7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 IL22Q9GZX6 179 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 DCTN4Q9UJW0 460 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 FBXO5Q9UKT4 447 aa7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 RPL26L1Q9UNX3 145 aaKnown RBP7.59□□□□□ -1.19
LIMCH1-219ENST00000514096 DNAJC13O75165 2243 aa7.59□□□□□ -1.2
LIMCH1-219ENST00000514096 IGHV5-51A0A0C4DH38 117 aa7.58□□□□□ -1.2
LIMCH1-219ENST00000514096 CCNT2O60583 730 aaKnown RBP7.58□□□□□ -1.2
LIMCH1-219ENST00000514096 SPAG7O75391 227 aa7.58□□□□□ -1.2
LIMCH1-219ENST00000514096 SNAP29O95721 258 aa7.58□□□□□ -1.2
LIMCH1-219ENST00000514096 DLGAP3O95886 979 aa7.58□□□□□ -1.2
LIMCH1-219ENST00000514096 EEF1B2P24534 225 aaKnown RBP7.58□□□□□ -1.2
LIMCH1-219ENST00000514096 PRIM2P49643 509 aa7.58□□□□□ -1.2
LIMCH1-219ENST00000514096 ARL4CP56559 192 aa7.58□□□□□ -1.2
LIMCH1-219ENST00000514096 KIAA1024LP59773 190 aa7.58□□□□□ -1.2
LIMCH1-219ENST00000514096 PCDH1Q08174 1060 aa7.58□□□□□ -1.2
LIMCH1-219ENST00000514096 ACSBG2Q5FVE4 666 aa7.58□□□□□ -1.2
LIMCH1-219ENST00000514096 PAOXQ6QHF9 649 aa7.58□□□□□ -1.2
LIMCH1-219ENST00000514096 AFTPHQ6ULP2 937 aa7.58□□□□□ -1.2
LIMCH1-219ENST00000514096 CMC1Q7Z7K0 106 aa7.58□□□□□ -1.2
LIMCH1-219ENST00000514096 CCDC103Q8IW40 242 aa7.58□□□□□ -1.2
LIMCH1-219ENST00000514096 ACVR1CQ8NER5 493 aa7.58□□□□□ -1.2
LIMCH1-219ENST00000514096 OR52E1Q8NGJ3 308 aa7.58□□□□□ -1.2
LIMCH1-219ENST00000514096 ZCCHC10Q8TBK6 192 aa7.58□□□□□ -1.2
LIMCH1-219ENST00000514096 KCNE4Q8WWG9 221 aa7.58□□□□□ -1.2
LIMCH1-219ENST00000514096 PLEKHA8Q96JA3 519 aa7.58□□□□□ -1.2
LIMCH1-219ENST00000514096 FOPNLQ96NB1 174 aa7.58□□□□□ -1.2
LIMCH1-219ENST00000514096 PSD2Q9BQI7 771 aa7.58□□□□□ -1.2
LIMCH1-219ENST00000514096 CCM2Q9BSQ5 444 aa7.58□□□□□ -1.2
LIMCH1-219ENST00000514096 VPS11Q9H270 941 aa7.58□□□□□ -1.2
LIMCH1-219ENST00000514096 FIS1Q9Y3D6 152 aa7.58□□□□□ -1.2
LIMCH1-219ENST00000514096 PCDHGB1Q9Y5G3 927 aa7.58□□□□□ -1.2
LIMCH1-219ENST00000514096 ITPR1Q14643 2758 aa7.58□□□□□ -1.2
LIMCH1-219ENST00000514096 TSPAN11A1L157 253 aa7.58□□□□□ -1.2
LIMCH1-219ENST00000514096 TLX3O43711 291 aaPredicted RBP7.58□□□□□ -1.2
LIMCH1-219ENST00000514096 TSPAN8P19075 237 aa7.58□□□□□ -1.2
LIMCH1-219ENST00000514096 NUDT1P36639 197 aa7.58□□□□□ -1.2
LIMCH1-219ENST00000514096 NSG1P42857 185 aa7.58□□□□□ -1.2
LIMCH1-219ENST00000514096 GDF5P43026 501 aa7.58□□□□□ -1.2
LIMCH1-219ENST00000514096 SEMA5AQ13591 1074 aa7.58□□□□□ -1.2
LIMCH1-219ENST00000514096 FAM189A2Q15884 450 aa7.58□□□□□ -1.2
LIMCH1-219ENST00000514096 TIGD6Q17RP2 521 aa7.58□□□□□ -1.2
LIMCH1-219ENST00000514096 PRICKLE2Q7Z3G6 844 aa7.58□□□□□ -1.2
LIMCH1-219ENST00000514096 SFRP1Q8N474 314 aa7.58□□□□□ -1.2
LIMCH1-219ENST00000514096 FITM2Q8N6M3 262 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms