RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 CAMKVQ8NCB2 501 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 NLGN4YQ8NFZ3 816 aaPredicted RBP9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 OR9A4Q8NGU2 314 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 HUS1BQ8NHY5 278 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 SNIP1Q8TAD8 396 aaKnown RBP9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 NT5CQ8TCD5 201 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 AGAP11Q8TF27 550 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 FGF11Q92914 225 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 NKD1Q969G9 470 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 TM4SF19Q96DZ7 209 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 CCDC126Q96EE4 140 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 CNTNAP3BQ96NU0 1288 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 GBP5Q96PP8 586 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 ZNF382Q96SR6 550 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 MTERF1Q99551 399 aaKnown RBP9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 SARGQ9BW04 601 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 SORBS1Q9BX66 1292 aaKnown RBP9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 MS4A8Q9BY19 250 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 RBCK1Q9BYM8 510 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 NLNQ9BYT8 704 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 CNTNAP3Q9BZ76 1288 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 OR51B5Q9H339 312 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 ZNF395Q9H8N7 513 aaPredicted RBP9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 MID1IP1Q9NPA3 183 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 LHX9Q9NQ69 397 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 DMRT3Q9NQL9 472 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 HCN3Q9P1Z3 774 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 SRPK3Q9UPE1 567 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 TIMM22Q9Y584 194 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 MRPS18BQ9Y676 258 aaKnown RBP9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 AP1M2Q9Y6Q5 423 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 SCN3AQ9NY46 2000 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 AHCTF1Q8WYP5 2266 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 A0A1B0GX78 115 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 ANKDD1BA6NHY2 528 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 DSCR3O14972 297 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 FOXS1O43638 330 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 ITM2AO43736 263 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 CNOT3O75175 753 aaKnown RBP9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 DNAJB6O75190 326 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 RDH16O75452 317 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 TGFB1P01137 390 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 LIFP15018 202 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 F8A1P23610 371 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 CD82P27701 267 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 ITPKBP27987 946 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 SERPINB3P29508 390 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 AHRP35869 848 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 DLSTP36957 453 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 EIF2S3P41091 472 aaKnown RBP9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 STAT5AP42229 794 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 CASP2P42575 452 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 PLA2G16P53816 162 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 TAGLNQ01995 201 aaKnown RBP9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 RELAQ04206 551 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 LAPTM5Q13571 262 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 HIST2H2ACQ16777 129 aaPredicted RBP9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 MUM1Q2TAK8 710 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 DEFB134Q4QY38 66 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 LIPJQ5W064 366 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 TTC19Q6DKK2 380 aaPredicted RBP9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 CLEC6AQ6EIG7 209 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 HIST2H2AA3Q6FI13 130 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 METTL2BQ6P1Q9 378 aaKnown RBP9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 SHISA6Q6ZSJ9 500 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 BPHLQ86WA6 291 aaPredicted RBP9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 PROSER1Q86XN7 944 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 NUDCD3Q8IVD9 361 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 SPACA3Q8IXA5 215 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 PRSS58Q8IYP2 241 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 ESX1Q8N693 406 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 L3MBTL4Q8NA19 623 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 ZNF248Q8NDW4 579 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 OR5T3Q8NGG3 340 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 PPP1R14CQ8TAE6 165 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 WDR20Q8TBZ3 569 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 UTP15Q8TED0 518 aaKnown RBP9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 ZNF473Q8WTR7 871 aaKnown RBP9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 THAP11Q96EK4 314 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 F2RL3Q96RI0 385 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 C17orf62Q9BQA9 187 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 NTMT1Q9BV86 223 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 SLC6A16Q9GZN6 736 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 DRC3Q9H069 523 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 ACBD3Q9H3P7 528 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 SLC22A11Q9NSA0 550 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 DKK4Q9UBT3 224 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 CTSFQ9UBX1 484 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 EGFL7Q9UHF1 273 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 IL17BQ9UHF5 180 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 TRPS1Q9UHF7 1281 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 ACSL6Q9UKU0 697 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 PTGDR2Q9Y5Y4 395 aa9.31□□□□□ -0.92
TOPBP1-209ENST00000513818 LAMA5O15230 3695 aa9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 MAGEB17A8MXT2 336 aa9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 HMGB1P1B2RPK0 211 aaPredicted RBP9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 H0YIV9 168 aa9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 H3BQF6 201 aa9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 ERI3O43414 337 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms