RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 DBF4BQ8NFT6 615 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 AFAP1L1Q8TED9 768 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 DNAJB3Q8WWF6 145 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 ARNTL2Q8WYA1 636 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 SEPT8Q92599 483 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 OTUB1Q96FW1 271 aaPredicted RBP3.9□□□□□ -1.79
HTT-210ENST00000512909 C17orf77Q96MU5 243 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 CTAGE1Q96RT6 745 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 MGME1Q9BQP7 344 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 THUMPD3Q9BV44 507 aaKnown RBP3.9□□□□□ -1.79
HTT-210ENST00000512909 TRMT61BQ9BVS5 477 aaKnown RBP3.9□□□□□ -1.79
HTT-210ENST00000512909 S1PR5Q9H228 398 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 PRO3102Q9H379 93 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 SNX25Q9H3E2 840 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 FN3KQ9H479 309 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 ZNF302Q9NR11 478 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 MBNL1Q9NR56 388 aaKnown RBP3.9□□□□□ -1.79
HTT-210ENST00000512909 SERINC1Q9NRX5 453 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 ERAP1Q9NZ08 941 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 B3GAT1Q9P2W7 334 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 GIMAP2Q9UG22 337 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 ZDHHC2Q9UIJ5 367 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 SNX7Q9UNH6 387 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 PLXNB2O15031 1838 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 MYH7P12883 1935 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 DOCK3Q8IZD9 2030 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 TEX13DA0A0J9YY54 714 aaPredicted RBP3.89□□□□□ -1.79
HTT-210ENST00000512909 FAM72CH0Y354 149 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 TRIM77I1YAP6 450 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 P2RY10O00398 339 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 CIDEAO60543 219 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 SLU7O95391 586 aaKnown RBP3.89□□□□□ -1.79
HTT-210ENST00000512909 PIGNO95427 931 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 ATP5BP06576 529 aaKnown RBP3.89□□□□□ -1.79
HTT-210ENST00000512909 CA3P07451 260 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 DANCRP0C864 163 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 GHRP10912 638 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 PDGFRAP16234 1089 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 IFNAR1P17181 557 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 CDH3P22223 829 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 JAK1P23458 1154 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 AZGP1P25311 298 aaKnown RBP3.89□□□□□ -1.79
HTT-210ENST00000512909 PTPN3P26045 913 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 CA8P35219 290 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 SOAT1P35610 550 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 GP5P40197 560 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 POU5F1Q01860 360 aaKnown RBP3.89□□□□□ -1.79
HTT-210ENST00000512909 PPARDQ03181 441 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 KLC1Q07866 573 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 MZT1Q08AG7 82 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 NONOQ15233 471 aaKnown RBP eCLIP3.89□□□□□ -1.79
HTT-210ENST00000512909 PHKG1Q16816 387 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 LRRC73Q5JTD7 316 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 FAM72AQ5TYM5 149 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 FAM72DQ6L9T8 149 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 PRR27Q6MZM9 219 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 ZNF449Q6P9G9 518 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 IL27RAQ6UWB1 636 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 FAM198BQ6UWH4 519 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 ISCA2Q86U28 154 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 FAM72BQ86X60 149 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 NUDT13Q86X67 352 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 KLHL7Q8IXQ5 586 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 C4orf19Q8IY42 314 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 MAML2Q8IZL2 1156 aaPredicted RBP3.89□□□□□ -1.79
HTT-210ENST00000512909 LGI2Q8N0V4 545 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 CCAR2Q8N163 923 aaKnown RBP3.89□□□□□ -1.79
HTT-210ENST00000512909 NDUFAF2Q8N183 169 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 ZNF713Q8N859 430 aaPredicted RBP3.89□□□□□ -1.79
HTT-210ENST00000512909 NIPA2Q8N8Q9 360 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 TRIML1Q8N9V2 468 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 C9orf106Q8NAJ2 232 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 NOA1Q8NC60 698 aaKnown RBP3.89□□□□□ -1.79
HTT-210ENST00000512909 TBCKQ8TEA7 893 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 IRGQQ8WZA9 623 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 SUSD6Q92537 303 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 DHX58Q96C10 678 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 FER1L6-AS2Q96M78 137 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 TEKT3Q9BXF9 490 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 VN1R1Q9GZP7 353 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 ZMYND12Q9H0C1 365 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 CDH20Q9HBT6 801 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 SH3GLB2Q9NR46 395 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 PRMT7Q9NVM4 692 aaPredicted RBP3.89□□□□□ -1.79
HTT-210ENST00000512909 C19orf25Q9UFG5 118 aaPredicted RBP3.89□□□□□ -1.79
HTT-210ENST00000512909 POMT1Q9Y6A1 747 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 MYH8P13535 1937 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 MYH4Q9Y623 1939 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 NRCAMQ92823 1304 aa3.89□□□□□ -1.79
HTT-210ENST00000512909 A0A087WWV3 80 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 TRAV34A0A0B4J273 112 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 A0A1W2PPW3 197 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 ANXA2P2A6NMY6 339 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 FAM86B1E9PN63 330 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 HAS3O00219 553 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 MSH4O15457 936 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 PRKNO60260 465 aaPredicted RBP3.88□□□□□ -1.79
HTT-210ENST00000512909 PFKFB2O60825 505 aa3.88□□□□□ -1.79
HTT-210ENST00000512909 ZNF432O94892 652 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms