RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 TMEM35AQ53FP2 167 aa3.35□□□□□ -1.87
TOPBP1-208ENST00000511439 EEF1A1P5Q5VTE0 462 aa3.35□□□□□ -1.87
TOPBP1-208ENST00000511439 GTF2H2CQ6P1K8 395 aa3.35□□□□□ -1.87
TOPBP1-208ENST00000511439 ZNF704Q6ZNC4 412 aaPredicted RBP3.35□□□□□ -1.87
TOPBP1-208ENST00000511439 Q75L30 129 aa3.35□□□□□ -1.87
TOPBP1-208ENST00000511439 ZNF534Q76KX8 674 aa3.35□□□□□ -1.87
TOPBP1-208ENST00000511439 LINC00346Q8IVM7 164 aa3.35□□□□□ -1.87
TOPBP1-208ENST00000511439 SLC5A8Q8N695 610 aa3.35□□□□□ -1.87
TOPBP1-208ENST00000511439 GCSAMQ8N6F7 178 aa3.35□□□□□ -1.87
TOPBP1-208ENST00000511439 SEPT1Q8WYJ6 367 aa3.35□□□□□ -1.87
TOPBP1-208ENST00000511439 CD101Q93033 1021 aa3.35□□□□□ -1.87
TOPBP1-208ENST00000511439 CEP295NLQ96MC4 621 aa3.35□□□□□ -1.87
TOPBP1-208ENST00000511439 PAFAH2Q99487 392 aa3.35□□□□□ -1.87
TOPBP1-208ENST00000511439 EVA1AQ9H8M9 152 aa3.35□□□□□ -1.87
TOPBP1-208ENST00000511439 PSD3Q9NYI0 1048 aa3.35□□□□□ -1.87
TOPBP1-208ENST00000511439 MRPL15Q9P015 296 aaKnown RBP3.35□□□□□ -1.87
TOPBP1-208ENST00000511439 B3GALT5Q9Y2C3 310 aa3.35□□□□□ -1.87
TOPBP1-208ENST00000511439 DLGAP4Q9Y2H0 992 aa3.35□□□□□ -1.87
TOPBP1-208ENST00000511439 MRPL11Q9Y3B7 192 aaKnown RBP3.35□□□□□ -1.87
TOPBP1-208ENST00000511439 RPS6KL1Q9Y6S9 549 aa3.35□□□□□ -1.87
TOPBP1-208ENST00000511439 ZNF532Q9HCE3 1301 aa3.35□□□□□ -1.87
TOPBP1-208ENST00000511439 NOTCH1P46531 2555 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 LOC100509620A0A075B734 347 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 IGHV1OR15-9A0A0B4J2B8 117 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 ZCWPW2A0A1B0GU75 182 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 ASPDHA6ND91 283 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 A8MV72 311 aaPredicted RBP3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 J3QR06 171 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 SH2B2O14492 632 aaPredicted RBP3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 ZNHIT1O43257 154 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 WDR1O75083 606 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 AVILO75366 819 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 PRDM1O75626 825 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 WISP2O76076 250 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 VTNP04004 478 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 ADRB2P07550 413 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 FAM106CPP0CH98 169 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 GJA1P17302 382 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 POLR2CP19387 275 aaPredicted RBP3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 U2AF2P26368 475 aaKnown RBP eCLIP3.34□□□□□ -1.872e-14■■■■■ 45.6
TOPBP1-208ENST00000511439 ZNF132P52740 706 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 CTSCP53634 463 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 HILS1P60008 231 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 PPP2R2BQ00005 443 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 NUCB1Q02818 461 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 WDR43Q15061 677 aaKnown RBP eCLIP3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 MEP1AQ16819 746 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 LACTB2Q53H82 288 aaPredicted RBP3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 IGSF11Q5DX21 431 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 EOGTQ5NDL2 527 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 MFSD4BQ5TF39 518 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 GARNL3Q5VVW2 1013 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 RAD9BQ6WBX8 426 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 STOX1Q6ZVD7 989 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 PRPF39Q86UA1 669 aaKnown RBP3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 EXOC3L1Q86VI1 746 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 MUC20Q8N307 709 aaPredicted RBP3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 ARL14Q8N4G2 192 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 LSMEM1Q8N8F7 131 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 INPP4AQ96PE3 977 aaPredicted RBP3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 SERINC2Q96SA4 455 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 DDOQ99489 341 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 PKP4Q99569 1192 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 NEURL2Q9BR09 285 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 RTN4RQ9BZR6 473 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 LRRCC1Q9C099 1032 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 PPIL3Q9H2H8 161 aaKnown RBP3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 LRMDAQ9H2I8 198 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 RAD21L1Q9H4I0 556 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 DENND2DQ9H6A0 471 aaPredicted RBP3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 ZNF71Q9NQZ8 489 aaPredicted RBP3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 RCC2Q9P258 522 aaKnown RBP3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 KLHL9Q9P2J3 617 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 CHORDC1Q9UHD1 332 aaPredicted RBP3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 AMACRQ9UHK6 382 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 POLG2Q9UHN1 485 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 POU2F3Q9UKI9 436 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 ADAM28Q9UKQ2 775 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 SATB2Q9UPW6 733 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 KIAA1549LQ6ZVL6 1849 aa3.34□□□□□ -1.87
TOPBP1-208ENST00000511439 RP1L1Q8IWN7 2480 aaPredicted RBP3.34□□□□□ -1.88
TOPBP1-208ENST00000511439 BAZ2AQ9UIF9 1905 aaKnown RBP3.34□□□□□ -1.88
TOPBP1-208ENST00000511439 COL6A5A8TX70 2615 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 A0A087WYN8 130 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 GSTTP1A0A1W2PQM5 241 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 A0A1W2PS18 150 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 CTAGE9A4FU28 777 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 OR5K3A6NET4 321 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 GLOD5A6NK44 160 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 TMEM189-UBE2V1I3L0A0 370 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 ADAM12O43184 909 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 ZBTB43O43298 467 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 ADAM20O43506 726 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 DFNA5O60443 496 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 TADA2AO75478 443 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 KRT36O76013 467 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 CTAGE8P0CG41 777 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 DARSP14868 501 aaKnown RBP3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 GM2AP17900 193 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 IL11P20809 199 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms