RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 ABRAXAS2Q15018 415 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 TBCEQ15813 527 aaPredicted RBP12.39□□□□□ -0.43
HMGB2-205ENST00000511316 TIMM50Q3ZCQ8 353 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 INO80DQ53TQ3 878 aaPredicted RBP12.39□□□□□ -0.43
HMGB2-205ENST00000511316 SLX4IPQ5VYV7 408 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 SDE2Q6IQ49 451 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 SCIMPQ6UWF3 145 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 SERPINA13PQ6UXR4 307 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 B3GNT8Q7Z7M8 397 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 HORMAD1Q86X24 394 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 LIX1Q8N485 282 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 LPCAT1Q8NF37 534 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 DSN1Q9H410 356 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 ACOT13Q9NPJ3 140 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 ITM2CQ9NQX7 267 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 WWOXQ9NZC7 414 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 USP36Q9P275 1121 aaKnown RBP12.39□□□□□ -0.43
HMGB2-205ENST00000511316 KIF17Q9P2E2 1029 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 HECAQ9UBI9 543 aaPredicted RBP12.39□□□□□ -0.43
HMGB2-205ENST00000511316 VPS51Q9UID3 782 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 MKLN1Q9UL63 735 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 ERVK-11Q9UQG0 969 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 HS3ST2Q9Y278 367 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 TSC22D4Q9Y3Q8 395 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 SPO11Q9Y5K1 396 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 RAI2Q9Y5P3 530 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 DGKBQ9Y6T7 804 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 A8MVJ9 347 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 MANBAO00462 879 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 SMAD6O43541 496 aaKnown RBP12.39□□□□□ -0.43
HMGB2-205ENST00000511316 FAM20BO75063 409 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 SEC22BO75396 215 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 IGLV3-19P01714 112 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 FABP3P05413 133 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 ITGALP20701 1170 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 PSMB9P28065 219 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 HMGCLP35914 325 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 HTR6P50406 440 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 RPS14P62263 151 aaKnown RBP12.39□□□□□ -0.43
HMGB2-205ENST00000511316 SRSF11Q05519 484 aaKnown RBP12.39□□□□□ -0.43
HMGB2-205ENST00000511316 PRKCDQ05655 676 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 RAPSNQ13702 412 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 VEZF1Q14119 521 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 SIM2Q14190 667 aaPredicted RBP12.39□□□□□ -0.43
HMGB2-205ENST00000511316 ELOAQ14241 798 aaKnown RBP12.39□□□□□ -0.43
HMGB2-205ENST00000511316 LPAL2Q16609 132 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 ADPRMQ3LIE5 342 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 ZNF404Q494X3 552 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 GPR33Q49SQ1 333 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 PAGE2BQ5JRK9 111 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 GCNT7Q6ZNI0 430 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 TAS2R42Q7RTR8 314 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 LRRC70Q7Z2Q7 622 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 CADM3Q8N126 398 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 ZNF540Q8NDQ6 660 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 MCFD2Q8NI22 146 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 C9orf43Q8TAL5 461 aaPredicted RBP12.39□□□□□ -0.43
HMGB2-205ENST00000511316 CHTF18Q8WVB6 975 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 LGALS12Q96DT0 336 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 CMTM7Q96FZ5 175 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 CTRCQ99895 268 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 HEPHQ9BQS7 1158 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 KLHL25Q9H0H3 589 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 FKBPLQ9UIM3 349 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 USP22Q9UPT9 525 aa12.39□□□□□ -0.43
HMGB2-205ENST00000511316 SPAG17Q6Q759 2223 aa12.38□□□□□ -0.43
HMGB2-205ENST00000511316 IGHV1OR15-9A0A0B4J2B8 117 aa12.38□□□□□ -0.43
HMGB2-205ENST00000511316 PABPN1LA6NDY0 278 aaKnown RBP12.38□□□□□ -0.43
HMGB2-205ENST00000511316 EFCAB9A8MZ26 197 aa12.38□□□□□ -0.43
HMGB2-205ENST00000511316 CLDN9O95484 217 aa12.38□□□□□ -0.43
HMGB2-205ENST00000511316 APOA1P02647 267 aa12.38□□□□□ -0.43
HMGB2-205ENST00000511316 FTH1P02794 183 aa12.38□□□□□ -0.43
HMGB2-205ENST00000511316 RHOCP08134 193 aa12.38□□□□□ -0.43
HMGB2-205ENST00000511316 BMP4P12644 408 aa12.38□□□□□ -0.43
HMGB2-205ENST00000511316 AGXTP21549 392 aa12.38□□□□□ -0.43
HMGB2-205ENST00000511316 CLK1P49759 484 aaKnown RBP12.38□□□□□ -0.43
HMGB2-205ENST00000511316 GZMMP51124 257 aa12.38□□□□□ -0.43
HMGB2-205ENST00000511316 MAPK10P53779 464 aa12.38□□□□□ -0.43
HMGB2-205ENST00000511316 AP1S1P61966 158 aa12.38□□□□□ -0.43
HMGB2-205ENST00000511316 ARF5P84085 180 aa12.38□□□□□ -0.43
HMGB2-205ENST00000511316 BOP1Q14137 746 aaKnown RBP12.38□□□□□ -0.43
HMGB2-205ENST00000511316 MAD2L1BPQ15013 274 aaPredicted RBP12.38□□□□□ -0.43
HMGB2-205ENST00000511316 NKG7Q16617 165 aa12.38□□□□□ -0.43
HMGB2-205ENST00000511316 FNDC3BQ53EP0 1204 aaKnown RBP12.38□□□□□ -0.43
HMGB2-205ENST00000511316 USP39Q53GS9 565 aaKnown RBP12.38□□□□□ -0.43
HMGB2-205ENST00000511316 SPANXN4Q5MJ08 99 aa12.38□□□□□ -0.43
HMGB2-205ENST00000511316 LAIR2Q6ISS4 152 aa12.38□□□□□ -0.43
HMGB2-205ENST00000511316 PSAPL1Q6NUJ1 521 aa12.38□□□□□ -0.43
HMGB2-205ENST00000511316 PNCKQ6P2M8 343 aa12.38□□□□□ -0.43
HMGB2-205ENST00000511316 AKAP14Q86UN6 197 aa12.38□□□□□ -0.43
HMGB2-205ENST00000511316 P3H2Q8IVL5 708 aa12.38□□□□□ -0.43
HMGB2-205ENST00000511316 DEPDC4Q8N2C3 294 aa12.38□□□□□ -0.43
HMGB2-205ENST00000511316 TTC29Q8NA56 475 aaPredicted RBP12.38□□□□□ -0.43
HMGB2-205ENST00000511316 ZFP90Q8TF47 636 aa12.38□□□□□ -0.43
HMGB2-205ENST00000511316 CRELD1Q96HD1 420 aa12.38□□□□□ -0.43
HMGB2-205ENST00000511316 EPYCQ99645 322 aa12.38□□□□□ -0.43
HMGB2-205ENST00000511316 EGFL8Q99944 293 aa12.38□□□□□ -0.43
HMGB2-205ENST00000511316 RSPH9Q9H1X1 276 aaPredicted RBP12.38□□□□□ -0.43
HMGB2-205ENST00000511316 REEP1Q9H902 201 aa12.38□□□□□ -0.43
HMGB2-205ENST00000511316 LATS2Q9NRM7 1088 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms