RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 EURLQ9NYK6 297 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 SENP1Q9P0U3 644 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 DCDC2Q9UHG0 476 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 LGALS13Q9UHV8 139 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 SLC39A10Q9ULF5 831 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 MTO1Q9Y2Z2 717 aaKnown RBP5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 PLEKHM1Q9Y4G2 1056 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 A0A096LPK6 155 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 GOLGA6L10A6NI86 522 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 SYCE1LA8MT33 242 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 TRIM49D1C9J1S8 452 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 TRIM38O00635 465 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 ATP8B1O43520 1251 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 SH3BP5O60239 455 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 TMEM127O75204 238 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 KLHL2O95198 593 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 WISP3O95389 354 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 TSPAN12O95859 305 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 MT-ND3P03897 115 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 ALDOAP04075 364 aaKnown RBP5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 C2P06681 752 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 RBP1P09455 135 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 LTA4HP09960 611 aaKnown RBP5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 MYZAPP0CAP1 466 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 CCDC166P0CW27 439 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 GCAP28676 217 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 SHMT2P34897 504 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 CCT5P48643 541 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 HNMTP50135 292 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 ADAM8P78325 824 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 IL9RQ01113 521 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 NFYCQ13952 458 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 CASP8Q14790 479 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 EFTUD2Q15029 972 aaKnown RBP eCLIP5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 TRIP6Q15654 476 aaKnown RBP5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 SMAD1Q15797 465 aaKnown RBP5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 ACSBG2Q5FVE4 666 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 METTL2BQ6P1Q9 378 aaKnown RBP5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 TMEM26Q6ZUK4 368 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 SLC35F3Q8IY50 421 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 CPNE9Q8IYJ1 553 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 KIAA2013Q8IYS2 634 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 TCAIMQ8N3R3 496 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 LILRA3Q8N6C8 439 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 OR2I1PQ8NGU4 316 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 OR10G6Q8NH81 332 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 STAG3L4Q8TBR4 150 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 Q8TCH9 128 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 SKA2Q8WVK7 121 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 KIAA1191Q96A73 305 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 SLC22A18Q96BI1 424 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 GRAMD1AQ96CP6 724 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 CLIP3Q96DZ5 547 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 LINGO1Q96FE5 620 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 PGM2Q96G03 612 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 ATXN7L3BQ96GX2 97 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 RMDN2Q96LZ7 410 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 CCDC138Q96M89 665 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 OLFM1Q99784 485 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 KRTAP9-3Q9BYQ3 159 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 RAB33BQ9H082 229 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 OR10A2Q9H208 303 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 SEC61A2Q9H9S3 476 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 PARVBQ9HBI1 364 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 SNX15Q9NRS6 342 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 RXFP3Q9NSD7 469 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 IMP3Q9NV31 184 aaKnown RBP5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 OR6C2Q9NZP2 312 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 SPATA7Q9P0W8 599 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 ZNF624Q9P2J8 865 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 SLC17A6Q9P2U8 582 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 LRIT1Q9P2V4 623 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 CTNNAL1Q9UBT7 734 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 EPHA6Q9UF33 1036 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 LNPEPQ9UIQ6 1025 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 TMCO1Q9UM00 188 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 ASF1AQ9Y294 204 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 WDR37Q9Y2I8 494 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 ENTPD2Q9Y5L3 495 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 NFS1Q9Y697 457 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 HEATR5BQ9P2D3 2071 aa5.3□□□□□ -1.56
HMGB1P44-201ENST00000508597 SEC16AO15027 2179 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 UQCRHLA0A096LP55 91 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 LY6G6EA0A0G2JKS1 128 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 A0A1W2PR48 441 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 OR52A4PA6NMU1 304 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 MYO1CO00159 1063 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 PPM1DO15297 605 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 TOX3O15405 576 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 RGS16O15492 202 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 DUX1O43812 170 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 PIAS1O75925 651 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 C1orf105O95561 183 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 LY86O95711 162 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 EML2O95834 649 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 SHBGP04278 402 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 UQCRHP07919 91 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 ANXA5P08758 320 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 SLC35E2BP0CK96 405 aa5.29□□□□□ -1.56
HMGB1P44-201ENST00000508597 CD1DP15813 335 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms