RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 PTPRQQ9UMZ3 2332 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 CFAP47Q6ZTR5 3102 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 TERTO14746 1132 aaKnown RBP8.68□□□□□ -1.02
NUP54-207ENST00000508583 TM9SF1O15321 606 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 DLX3O60479 287 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 ZWINTO95229 277 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 ENO1P06733 434 aaKnown RBP8.68□□□□□ -1.02
NUP54-207ENST00000508583 PCNAP12004 261 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 ALOX12P18054 663 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 EPORP19235 508 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 JAK1P23458 1154 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 ITPKBP27987 946 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 TSFMP43897 325 aaKnown RBP8.68□□□□□ -1.02
NUP54-207ENST00000508583 RRADP55042 308 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 PKNOX1P55347 436 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 CYP4F2P78329 520 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 RHDQ02161 417 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 CLCQ05315 142 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 ZNF33BQ06732 778 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 CDC20Q12834 499 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 SSPNQ14714 243 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 CASP8Q14790 479 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 UGT8Q16880 541 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 LIPMQ5VYY2 423 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 C16orf46Q6P387 395 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 FAM199XQ6PEV8 388 aaPredicted RBP8.68□□□□□ -1.02
NUP54-207ENST00000508583 HDXQ7Z353 690 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 MILR1Q7Z6M3 343 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 TMEM151AQ8N4L1 468 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 ARHGEF39Q8N4T4 335 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 ANKRD53Q8N9V6 530 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 ZNF740Q8NDX6 193 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 C7orf57Q8NEG2 295 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 OR2L5Q8NG80 312 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 OR7G3Q8NG95 312 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 OR2Y1Q8NGV0 311 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 ZCCHC10Q8TBK6 192 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 CREB3L4Q8TEY5 395 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 ZNF483Q8TF39 744 aaPredicted RBP8.68□□□□□ -1.02
NUP54-207ENST00000508583 MIEF2Q96C03 454 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 KCNC2Q96PR1 638 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 TMEM237Q96Q45 408 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 OR1F2PQ96R84 312 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 ZNF382Q96SR6 550 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 YIPF2Q9BWQ6 316 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 TGIF2Q9GZN2 237 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 ACBD3Q9H3P7 528 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 ELOVL6Q9H5J4 265 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 SEMA4BQ9NPR2 832 aaPredicted RBP8.68□□□□□ -1.02
NUP54-207ENST00000508583 SEMA3GQ9NS98 782 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 NMRK1Q9NWW6 199 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 PSD3Q9NYI0 1048 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 TRPC4Q9UBN4 977 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 PPT2Q9UMR5 302 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 G3BP2Q9UN86 482 aaKnown RBP8.68□□□□□ -1.02
NUP54-207ENST00000508583 SNX6Q9UNH7 406 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 POLHQ9Y253 713 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 PTRH2Q9Y3E5 179 aaKnown RBP8.68□□□□□ -1.02
NUP54-207ENST00000508583 ASB1Q9Y576 335 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 MAU2Q9Y6X3 613 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 SPACA6W5XKT8 324 aa8.68□□□□□ -1.02
NUP54-207ENST00000508583 EPG5Q9HCE0 2579 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 NBEAQ8NFP9 2946 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 IGLV3-12A0A075B6K2 115 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 A0A0A6YYC8 382 aaPredicted RBP8.67□□□□□ -1.02
NUP54-207ENST00000508583 LRIT2A6NDA9 550 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 I3L1I5 382 aaPredicted RBP8.67□□□□□ -1.02
NUP54-207ENST00000508583 PSMD12O00232 456 aaPredicted RBP8.67□□□□□ -1.02
NUP54-207ENST00000508583 FOXE1O00358 373 aaPredicted RBP8.67□□□□□ -1.02
NUP54-207ENST00000508583 PEX12O00623 359 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 ERI3O43414 337 aaKnown RBP8.67□□□□□ -1.02
NUP54-207ENST00000508583 B3GALT2O43825 422 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 KLHL41O60662 606 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 GALR3O60755 368 aaPredicted RBP8.67□□□□□ -1.02
NUP54-207ENST00000508583 TRIM13O60858 407 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 CRCPO75575 148 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 KLHL18O94889 574 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 KRT6AP02538 564 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 KRT6BP04259 564 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 CTSBP07858 339 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 SBK3P0C264 359 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 ZNF888P0CJ79 500 aaPredicted RBP8.67□□□□□ -1.02
NUP54-207ENST00000508583 IL1RNP18510 177 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 PTX3P26022 381 aaPredicted RBP8.67□□□□□ -1.02
NUP54-207ENST00000508583 SERPINB5P36952 375 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 OR1D4P47884 311 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 KRT6CP48668 564 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 RAP1GDS1P52306 607 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 CACNA1BQ00975 2339 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 SRSF6Q13247 344 aaKnown RBP8.67□□□□□ -1.02
NUP54-207ENST00000508583 CPSF6Q16630 551 aaKnown RBP eCLIP8.67□□□□□ -1.02
NUP54-207ENST00000508583 ADPRMQ3LIE5 342 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 TOR1AIP1Q5JTV8 583 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 FRG2Q64ET8 278 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 MRPL14Q6P1L8 145 aaKnown RBP8.67□□□□□ -1.02
NUP54-207ENST00000508583 FRMD7Q6ZUT3 714 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 GPRIN3Q6ZVF9 776 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 KIRREL3Q8IZU9 778 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 AFAP1L2Q8N4X5 818 aa8.67□□□□□ -1.02
NUP54-207ENST00000508583 METTL27Q8N6F8 245 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms