RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 LRRC8EQ6NSJ5 796 aa12.37□□□□□ -0.43
DDX41-204ENST00000504807 SYDE1Q6ZW31 735 aaPredicted RBP12.37□□□□□ -0.43
DDX41-204ENST00000504807 CPEB2Q7Z5Q1 589 aaKnown RBP12.37□□□□□ -0.43
DDX41-204ENST00000504807 STRA8Q7Z7C7 330 aa12.37□□□□□ -0.43
DDX41-204ENST00000504807 FAR1Q8WVX9 515 aa12.37□□□□□ -0.43
DDX41-204ENST00000504807 ITLN2Q8WWU7 325 aaPredicted RBP12.37□□□□□ -0.43
DDX41-204ENST00000504807 PDLIM5Q96HC4 596 aaKnown RBP12.37□□□□□ -0.43
DDX41-204ENST00000504807 HES7Q9BYE0 225 aa12.37□□□□□ -0.43
DDX41-204ENST00000504807 RIC8BQ9NVN3 520 aa12.37□□□□□ -0.43
DDX41-204ENST00000504807 GRHL1Q9NZI5 618 aa12.37□□□□□ -0.43
DDX41-204ENST00000504807 SAR1BQ9Y6B6 198 aa12.37□□□□□ -0.43
DDX41-204ENST00000504807 A0A1B0GUH1 482 aa12.36□□□□□ -0.43
DDX41-204ENST00000504807 TRBC2A0A5B9 178 aa12.36□□□□□ -0.43
DDX41-204ENST00000504807 NDUFS4O43181 175 aa12.36□□□□□ -0.43
DDX41-204ENST00000504807 OR1F1O43749 312 aa12.36□□□□□ -0.43
DDX41-204ENST00000504807 KLHL41O60662 606 aa12.36□□□□□ -0.43
DDX41-204ENST00000504807 GALR3O60755 368 aaPredicted RBP12.36□□□□□ -0.43
DDX41-204ENST00000504807 FAM155BO75949 473 aa12.36□□□□□ -0.43
DDX41-204ENST00000504807 TBX6O95947 436 aaPredicted RBP12.36□□□□□ -0.43
DDX41-204ENST00000504807 ZNF888P0CJ79 500 aaPredicted RBP12.36□□□□□ -0.43
DDX41-204ENST00000504807 CAPN3P20807 821 aa12.36□□□□□ -0.43
DDX41-204ENST00000504807 HRH2P25021 359 aa12.36□□□□□ -0.43
DDX41-204ENST00000504807 CXCR2P25025 360 aa12.36□□□□□ -0.43
DDX41-204ENST00000504807 SSTR1P30872 391 aa12.36□□□□□ -0.43
DDX41-204ENST00000504807 SCTRP47872 440 aa12.36□□□□□ -0.43
DDX41-204ENST00000504807 ARL4CP56559 192 aa12.36□□□□□ -0.43
DDX41-204ENST00000504807 KCNK10P57789 538 aa12.36□□□□□ -0.43
DDX41-204ENST00000504807 ARG2P78540 354 aa12.36□□□□□ -0.43
DDX41-204ENST00000504807 BTG2P78543 158 aa12.36□□□□□ -0.43
DDX41-204ENST00000504807 REEP5Q00765 189 aa12.36□□□□□ -0.43
DDX41-204ENST00000504807 C2orf54Q08AI8 447 aa12.36□□□□□ -0.43
DDX41-204ENST00000504807 MGAT5Q09328 741 aa12.36□□□□□ -0.43
DDX41-204ENST00000504807 CBLBQ13191 982 aa12.36□□□□□ -0.43
DDX41-204ENST00000504807 TSNQ15631 228 aaKnown RBP12.36□□□□□ -0.43
DDX41-204ENST00000504807 NDUFA9Q16795 377 aa12.36□□□□□ -0.43
DDX41-204ENST00000504807 ZNF630Q2M218 657 aaPredicted RBP12.36□□□□□ -0.43
DDX41-204ENST00000504807 DEFB134Q4QY38 66 aa12.36□□□□□ -0.43
DDX41-204ENST00000504807 UBAP2Q5T6F2 1119 aaKnown RBP12.36□□□□□ -0.43
DDX41-204ENST00000504807 MFSD4BQ5TF39 518 aa12.36□□□□□ -0.43
DDX41-204ENST00000504807 KIF2BQ8N4N8 673 aa12.36□□□□□ -0.43
DDX41-204ENST00000504807 SLC5A11Q8WWX8 675 aa12.36□□□□□ -0.43
DDX41-204ENST00000504807 HAS2Q92819 552 aa12.36□□□□□ -0.43
DDX41-204ENST00000504807 LRRC39Q96DD0 335 aa12.36□□□□□ -0.43
DDX41-204ENST00000504807 THAP11Q96EK4 314 aa12.36□□□□□ -0.43
DDX41-204ENST00000504807 SIGLEC12Q96PQ1 595 aa12.36□□□□□ -0.43
DDX41-204ENST00000504807 PCBD2Q9H0N5 130 aa12.36□□□□□ -0.43
DDX41-204ENST00000504807 DPH5Q9H2P9 285 aa12.36□□□□□ -0.43
DDX41-204ENST00000504807 SLC22A14Q9Y267 594 aa12.36□□□□□ -0.43
DDX41-204ENST00000504807 MTO1Q9Y2Z2 717 aaKnown RBP12.36□□□□□ -0.43
DDX41-204ENST00000504807 ASB1Q9Y576 335 aa12.36□□□□□ -0.43
DDX41-204ENST00000504807 SLC22A7Q9Y694 548 aa12.36□□□□□ -0.43
DDX41-204ENST00000504807 ZNF469Q96JG9 3925 aaPredicted RBP12.35□□□□□ -0.43
DDX41-204ENST00000504807 EFCAB8A8MWE9 144 aa12.35□□□□□ -0.43
DDX41-204ENST00000504807 FAM227AF5H4B4 570 aa12.35□□□□□ -0.43
DDX41-204ENST00000504807 TAPBPO15533 448 aa12.35□□□□□ -0.43
DDX41-204ENST00000504807 RAD51CO43502 376 aa12.35□□□□□ -0.43
DDX41-204ENST00000504807 CHST10O43529 356 aa12.35□□□□□ -0.43
DDX41-204ENST00000504807 SMIM10L1P0DMW3 83 aa12.35□□□□□ -0.43
DDX41-204ENST00000504807 HNF4AP41235 474 aa12.35□□□□□ -0.43
DDX41-204ENST00000504807 CCR8P51685 355 aa12.35□□□□□ -0.43
DDX41-204ENST00000504807 AP1S2P56377 157 aa12.35□□□□□ -0.43
DDX41-204ENST00000504807 GPX6P59796 221 aa12.35□□□□□ -0.43
DDX41-204ENST00000504807 BTBD16Q32M84 506 aa12.35□□□□□ -0.43
DDX41-204ENST00000504807 IRAK1BP1Q5VVH5 260 aa12.35□□□□□ -0.43
DDX41-204ENST00000504807 PLAG1Q6DJT9 500 aa12.35□□□□□ -0.43
DDX41-204ENST00000504807 H3F3CQ6NXT2 135 aa12.35□□□□□ -0.43
DDX41-204ENST00000504807 RPUSD3Q6P087 351 aaKnown RBP12.35□□□□□ -0.43
DDX41-204ENST00000504807 BNC2Q6ZN30 1099 aaPredicted RBP12.35□□□□□ -0.43
DDX41-204ENST00000504807 RIPOR1Q6ZS17 1223 aa12.35□□□□□ -0.43
DDX41-204ENST00000504807 VN1R5Q7Z5H4 357 aa12.35□□□□□ -0.43
DDX41-204ENST00000504807 THOC6Q86W42 341 aaKnown RBP12.35□□□□□ -0.43
DDX41-204ENST00000504807 ZBED8Q8IZ13 594 aa12.35□□□□□ -0.43
DDX41-204ENST00000504807 BEST3Q8N1M1 668 aa12.35□□□□□ -0.43
DDX41-204ENST00000504807 CAMKVQ8NCB2 501 aa12.35□□□□□ -0.43
DDX41-204ENST00000504807 NT5CQ8TCD5 201 aa12.35□□□□□ -0.43
DDX41-204ENST00000504807 UTP15Q8TED0 518 aaKnown RBP12.35□□□□□ -0.43
DDX41-204ENST00000504807 CREB3L4Q8TEY5 395 aa12.35□□□□□ -0.43
DDX41-204ENST00000504807 SMIM10Q96HG1 83 aa12.35□□□□□ -0.43
DDX41-204ENST00000504807 TMEM79Q9BSE2 394 aa12.35□□□□□ -0.43
DDX41-204ENST00000504807 HAUS8Q9BT25 410 aa12.35□□□□□ -0.43
DDX41-204ENST00000504807 TUBB6Q9BUF5 446 aa12.35□□□□□ -0.43
DDX41-204ENST00000504807 SLC6A16Q9GZN6 736 aa12.35□□□□□ -0.43
DDX41-204ENST00000504807 ANKHQ9HCJ1 492 aa12.35□□□□□ -0.43
DDX41-204ENST00000504807 ANKRD10Q9NXR5 420 aa12.35□□□□□ -0.43
DDX41-204ENST00000504807 ZFATQ9P243 1243 aa12.35□□□□□ -0.43
DDX41-204ENST00000504807 CORO1CQ9ULV4 474 aaPredicted RBP12.35□□□□□ -0.43
DDX41-204ENST00000504807 ACANP16112 2415 aa12.35□□□□□ -0.43
DDX41-204ENST00000504807 TGFBR3LH3BV60 316 aa12.34□□□□□ -0.43
DDX41-204ENST00000504807 PCDH17O14917 1159 aa12.34□□□□□ -0.43
DDX41-204ENST00000504807 PHGDHO43175 533 aaKnown RBP12.34□□□□□ -0.43
DDX41-204ENST00000504807 ZNHIT1O43257 154 aa12.34□□□□□ -0.43
DDX41-204ENST00000504807 WFS1O76024 890 aa12.34□□□□□ -0.43
DDX41-204ENST00000504807 SERPIND1P05546 499 aa12.34□□□□□ -0.43
DDX41-204ENST00000504807 STSP08842 583 aa12.34□□□□□ -0.43
DDX41-204ENST00000504807 HIST1H2AGP0C0S8 130 aaPredicted RBP12.34□□□□□ -0.43
DDX41-204ENST00000504807 EDN3P14138 238 aa12.34□□□□□ -0.43
DDX41-204ENST00000504807 HIST1H2ADP20671 130 aa12.34□□□□□ -0.43
DDX41-204ENST00000504807 CCND1P24385 295 aa12.34□□□□□ -0.43
DDX41-204ENST00000504807 SLC6A12P48065 614 aa12.34□□□□□ -0.43
DDX41-204ENST00000504807 KCNC1P48547 511 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms