RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 PRTGQ2VWP7 1150 aa19.43■□□□□ 0.7
CDC42SE2-206ENST00000503291 GALNTL6Q49A17 601 aa19.43■□□□□ 0.7
CDC42SE2-206ENST00000503291 TOR1AIP1Q5JTV8 583 aa19.43■□□□□ 0.7
CDC42SE2-206ENST00000503291 PIGWQ7Z7B1 504 aa19.43■□□□□ 0.7
CDC42SE2-206ENST00000503291 OR1L3Q8NH93 324 aa19.43■□□□□ 0.7
CDC42SE2-206ENST00000503291 DEPDC7Q96QD5 511 aa19.43■□□□□ 0.7
CDC42SE2-206ENST00000503291 FANCEQ9HB96 536 aa19.43■□□□□ 0.7
CDC42SE2-206ENST00000503291 AKAP7Q9P0M2 348 aaPredicted RBP19.43■□□□□ 0.7
CDC42SE2-206ENST00000503291 EFCAB7A8K855 629 aa19.42■□□□□ 0.7
CDC42SE2-206ENST00000503291 VPS4BO75351 444 aa19.42■□□□□ 0.7
CDC42SE2-206ENST00000503291 SDHBP21912 280 aa19.42■□□□□ 0.7
CDC42SE2-206ENST00000503291 TBL3Q12788 808 aaKnown RBP19.42■□□□□ 0.7
CDC42SE2-206ENST00000503291 COL9A2Q14055 689 aaPredicted RBP19.42■□□□□ 0.7
CDC42SE2-206ENST00000503291 ATP6AP1LQ52LC2 224 aa19.42■□□□□ 0.7
CDC42SE2-206ENST00000503291 TMEM35AQ53FP2 167 aa19.42■□□□□ 0.7
CDC42SE2-206ENST00000503291 C6orf136Q5SQH8 315 aa19.42■□□□□ 0.7
CDC42SE2-206ENST00000503291 APIPQ96GX9 242 aa19.42■□□□□ 0.7
CDC42SE2-206ENST00000503291 PPP3R2Q96LZ3 170 aa19.42■□□□□ 0.7
CDC42SE2-206ENST00000503291 RTKNQ9BST9 563 aa19.42■□□□□ 0.7
CDC42SE2-206ENST00000503291 LRTM1Q9HBL6 345 aa19.42■□□□□ 0.7
CDC42SE2-206ENST00000503291 NPIPB8E9PQR5 432 aa19.42■□□□□ 0.7
CDC42SE2-206ENST00000503291 SEC22BO75396 215 aa19.42■□□□□ 0.7
CDC42SE2-206ENST00000503291 CCL4P13236 92 aa19.42■□□□□ 0.7
CDC42SE2-206ENST00000503291 PRPH2P23942 346 aa19.42■□□□□ 0.7
CDC42SE2-206ENST00000503291 PLA2G16P53816 162 aa19.42■□□□□ 0.7
CDC42SE2-206ENST00000503291 ITGA1P56199 1179 aa19.42■□□□□ 0.7
CDC42SE2-206ENST00000503291 LSM12Q3MHD2 195 aaKnown RBP19.42■□□□□ 0.7
CDC42SE2-206ENST00000503291 RFTN2Q52LD8 501 aaPredicted RBP19.42■□□□□ 0.7
CDC42SE2-206ENST00000503291 NXNQ6DKJ4 435 aa19.42■□□□□ 0.7
CDC42SE2-206ENST00000503291 TMEM214Q6NUQ4 689 aaKnown RBP19.42■□□□□ 0.7
CDC42SE2-206ENST00000503291 ACAD11Q709F0 780 aa19.42■□□□□ 0.7
CDC42SE2-206ENST00000503291 BMPERQ8N8U9 685 aa19.42■□□□□ 0.7
CDC42SE2-206ENST00000503291 OR2L5Q8NG80 312 aa19.42■□□□□ 0.7
CDC42SE2-206ENST00000503291 CEP70Q8NHQ1 597 aa19.42■□□□□ 0.7
CDC42SE2-206ENST00000503291 ACTRT2Q8TDY3 377 aa19.42■□□□□ 0.7
CDC42SE2-206ENST00000503291 RILPQ96NA2 401 aa19.42■□□□□ 0.7
CDC42SE2-206ENST00000503291 CENPKQ9BS16 269 aa19.42■□□□□ 0.7
CDC42SE2-206ENST00000503291 TCF7L2Q9NQB0 619 aa19.42■□□□□ 0.7
CDC42SE2-206ENST00000503291 C1orf109Q9NX04 203 aa19.42■□□□□ 0.7
CDC42SE2-206ENST00000503291 URADA6NGE7 173 aa19.41■□□□□ 0.7
CDC42SE2-206ENST00000503291 PLPP1O14494 284 aa19.41■□□□□ 0.7
CDC42SE2-206ENST00000503291 HYAL3O43820 417 aaPredicted RBP19.41■□□□□ 0.7
CDC42SE2-206ENST00000503291 PRR35P0CG20 571 aa19.41■□□□□ 0.7
CDC42SE2-206ENST00000503291 RAB8AP61006 207 aa19.41■□□□□ 0.7
CDC42SE2-206ENST00000503291 SNRPNP63162 240 aaKnown RBP19.41■□□□□ 0.7
CDC42SE2-206ENST00000503291 KIAA0040Q15053 153 aa19.41■□□□□ 0.7
CDC42SE2-206ENST00000503291 UBE3DQ7Z6J8 389 aa19.41■□□□□ 0.7
CDC42SE2-206ENST00000503291 GPR135Q8IZ08 494 aa19.41■□□□□ 0.7
CDC42SE2-206ENST00000503291 UTP15Q8TED0 518 aaKnown RBP19.41■□□□□ 0.7
CDC42SE2-206ENST00000503291 CHTF18Q8WVB6 975 aa19.41■□□□□ 0.7
CDC42SE2-206ENST00000503291 C10orf82Q8WW14 230 aa19.41■□□□□ 0.7
CDC42SE2-206ENST00000503291 RGMAQ96B86 450 aa19.41■□□□□ 0.7
CDC42SE2-206ENST00000503291 ENAMQ9NRM1 1142 aa19.41■□□□□ 0.7
CDC42SE2-206ENST00000503291 RARRES3Q9UL19 164 aa19.41■□□□□ 0.7
CDC42SE2-206ENST00000503291 KNTC1P50748 2209 aa19.41■□□□□ 0.7
CDC42SE2-206ENST00000503291 KIF26BQ2KJY2 2108 aa19.41■□□□□ 0.7
CDC42SE2-206ENST00000503291 DCDC2BA2VCK2 349 aa19.41■□□□□ 0.7
CDC42SE2-206ENST00000503291 FITM1A5D6W6 292 aa19.41■□□□□ 0.7
CDC42SE2-206ENST00000503291 C4orf51C9J302 202 aa19.41■□□□□ 0.7
CDC42SE2-206ENST00000503291 RTCAO00442 366 aaKnown RBP19.41■□□□□ 0.7
CDC42SE2-206ENST00000503291 ERI3O43414 337 aaKnown RBP19.41■□□□□ 0.7
CDC42SE2-206ENST00000503291 SEMA3DO95025 777 aa19.41■□□□□ 0.7
CDC42SE2-206ENST00000503291 RAP1GDS1P52306 607 aa19.41■□□□□ 0.7
CDC42SE2-206ENST00000503291 GRM7Q14831 915 aa19.41■□□□□ 0.7
CDC42SE2-206ENST00000503291 ABHD17CQ6PCB6 329 aa19.41■□□□□ 0.7
CDC42SE2-206ENST00000503291 RAB11FIP2Q7L804 512 aa19.41■□□□□ 0.7
CDC42SE2-206ENST00000503291 ARHGEF39Q8N4T4 335 aa19.41■□□□□ 0.7
CDC42SE2-206ENST00000503291 ZCCHC10Q8TBK6 192 aa19.41■□□□□ 0.7
CDC42SE2-206ENST00000503291 BCAS4Q8TDM0 211 aa19.41■□□□□ 0.7
CDC42SE2-206ENST00000503291 LIN37Q96GY3 246 aaPredicted RBP19.41■□□□□ 0.7
CDC42SE2-206ENST00000503291 C17orf62Q9BQA9 187 aa19.41■□□□□ 0.7
CDC42SE2-206ENST00000503291 APMAPQ9HDC9 416 aa19.41■□□□□ 0.7
CDC42SE2-206ENST00000503291 AHSPQ9NZD4 102 aa19.41■□□□□ 0.7
CDC42SE2-206ENST00000503291 MRPS2Q9Y399 296 aaKnown RBP19.41■□□□□ 0.7
CDC42SE2-206ENST00000503291 LOXL2Q9Y4K0 774 aa19.41■□□□□ 0.7
CDC42SE2-206ENST00000503291 A0A0G2JN53 185 aa19.4■□□□□ 0.7
CDC42SE2-206ENST00000503291 HYKKA2RU49 373 aa19.4■□□□□ 0.7
CDC42SE2-206ENST00000503291 ZNF888P0CJ79 500 aaPredicted RBP19.4■□□□□ 0.7
CDC42SE2-206ENST00000503291 LBPP18428 481 aa19.4■□□□□ 0.7
CDC42SE2-206ENST00000503291 MC2RQ01718 297 aa19.4■□□□□ 0.7
CDC42SE2-206ENST00000503291 ACSM2AQ08AH3 577 aa19.4■□□□□ 0.7
CDC42SE2-206ENST00000503291 PRAMEF17Q5VTA0 474 aa19.4■□□□□ 0.7
CDC42SE2-206ENST00000503291 ACSM2BQ68CK6 577 aa19.4■□□□□ 0.7
CDC42SE2-206ENST00000503291 TLDC1Q6P9B6 456 aa19.4■□□□□ 0.7
CDC42SE2-206ENST00000503291 TRIM40Q6P9F5 258 aa19.4■□□□□ 0.7
CDC42SE2-206ENST00000503291 ALYREFQ86V81 257 aaKnown RBP19.4■□□□□ 0.7
CDC42SE2-206ENST00000503291 TMPRSS12Q86WS5 348 aa19.4■□□□□ 0.7
CDC42SE2-206ENST00000503291 ZFAND4Q86XD8 727 aa19.4■□□□□ 0.7
CDC42SE2-206ENST00000503291 METTL4Q8N3J2 472 aa19.4■□□□□ 0.7
CDC42SE2-206ENST00000503291 C1orf52Q8N6N3 182 aaKnown RBP19.4■□□□□ 0.7
CDC42SE2-206ENST00000503291 FNDC5Q8NAU1 212 aa19.4■□□□□ 0.7
CDC42SE2-206ENST00000503291 SRFBP1Q8NEF9 429 aaKnown RBP19.4■□□□□ 0.7
CDC42SE2-206ENST00000503291 STON2Q8WXE9 905 aa19.4■□□□□ 0.7
CDC42SE2-206ENST00000503291 GAL3ST3Q96A11 431 aa19.4■□□□□ 0.7
CDC42SE2-206ENST00000503291 C11orf24Q96F05 449 aaPredicted RBP19.4■□□□□ 0.7
CDC42SE2-206ENST00000503291 METTL2AQ96IZ6 378 aaKnown RBP19.4■□□□□ 0.7
CDC42SE2-206ENST00000503291 CCDC28BQ9BUN5 200 aa19.4■□□□□ 0.7
CDC42SE2-206ENST00000503291 SORBS1Q9BX66 1292 aaKnown RBP19.4■□□□□ 0.7
CDC42SE2-206ENST00000503291 FBXO8Q9NRD0 319 aa19.4■□□□□ 0.7
CDC42SE2-206ENST00000503291 SMIM10L1P0DMW3 83 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms