RNA–Protein interactions for RNA: ENST00000501412.2

RAP1B-213, Transcript of RAP1B, member of RAS oncogene family, human

TSL 2

Gene RAP1B, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-213	ENST00000501412	SPIN4	Q56A73	249 aa		21.19	■□□□□ 0.98
RAP1B-213	ENST00000501412	C6orf89	Q6UWU4	347 aa		21.19	■□□□□ 0.98
RAP1B-213	ENST00000501412	GLRX5	Q86SX6	157 aa		21.19	■□□□□ 0.98
RAP1B-213	ENST00000501412	FITM2	Q8N6M3	262 aa		21.19	■□□□□ 0.98
RAP1B-213	ENST00000501412	C1orf52	Q8N6N3	182 aa	Known RBP	21.19	■□□□□ 0.98
RAP1B-213	ENST00000501412	KCT2	Q8NC54	265 aa		21.19	■□□□□ 0.98
RAP1B-213	ENST00000501412	CCDC74B	Q96LY2	380 aa		21.19	■□□□□ 0.98
RAP1B-213	ENST00000501412	BRINP2	Q9C0B6	783 aa		21.19	■□□□□ 0.98
RAP1B-213	ENST00000501412	REXO4	Q9GZR2	422 aa	Known RBP	21.19	■□□□□ 0.98
RAP1B-213	ENST00000501412	SOHLH2	Q9NX45	425 aa		21.19	■□□□□ 0.98
RAP1B-213	ENST00000501412	PLCL2	Q9UPR0	1127 aa		21.19	■□□□□ 0.98
RAP1B-213	ENST00000501412	DLGAP4	Q9Y2H0	992 aa		21.19	■□□□□ 0.98
RAP1B-213	ENST00000501412	GPR45	Q9Y5Y3	372 aa		21.19	■□□□□ 0.98
RAP1B-213	ENST00000501412	COPG1	Q9Y678	874 aa	Known RBP	21.19	■□□□□ 0.98
RAP1B-213	ENST00000501412	PCNX2	A6NKB5	2137 aa		21.18	■□□□□ 0.98
RAP1B-213	ENST00000501412	SRPX2	O60687	465 aa	Predicted RBP	21.18	■□□□□ 0.98
RAP1B-213	ENST00000501412	CCDC22	O60826	627 aa		21.18	■□□□□ 0.98
RAP1B-213	ENST00000501412	KLHL18	O94889	574 aa		21.18	■□□□□ 0.98
RAP1B-213	ENST00000501412	SLC35G6	P0C7Q6	338 aa		21.18	■□□□□ 0.98
RAP1B-213	ENST00000501412	SMIM10L1	P0DMW3	83 aa		21.18	■□□□□ 0.98
RAP1B-213	ENST00000501412	NCF2	P19878	526 aa	Predicted RBP	21.18	■□□□□ 0.98
RAP1B-213	ENST00000501412	BSG	P35613	385 aa		21.18	■□□□□ 0.98
RAP1B-213	ENST00000501412	ATP4B	P51164	291 aa		21.18	■□□□□ 0.98
RAP1B-213	ENST00000501412	VSX2	P58304	361 aa	Predicted RBP	21.18	■□□□□ 0.98
RAP1B-213	ENST00000501412	ACSM2A	Q08AH3	577 aa		21.18	■□□□□ 0.98
RAP1B-213	ENST00000501412	HKDC1	Q2TB90	917 aa		21.18	■□□□□ 0.98
RAP1B-213	ENST00000501412	PRTG	Q2VWP7	1150 aa		21.18	■□□□□ 0.98
RAP1B-213	ENST00000501412	MANEA	Q5SRI9	462 aa		21.18	■□□□□ 0.98
RAP1B-213	ENST00000501412	IL23R	Q5VWK5	629 aa		21.18	■□□□□ 0.98
RAP1B-213	ENST00000501412	ACSM2B	Q68CK6	577 aa		21.18	■□□□□ 0.98
RAP1B-213	ENST00000501412	DGLUCY	Q7Z3D6	616 aa		21.18	■□□□□ 0.98
RAP1B-213	ENST00000501412	COMMD6	Q7Z4G1	85 aa		21.18	■□□□□ 0.98
RAP1B-213	ENST00000501412	CLNK	Q7Z7G1	428 aa		21.18	■□□□□ 0.98
RAP1B-213	ENST00000501412	CAMKV	Q8NCB2	501 aa		21.18	■□□□□ 0.98
RAP1B-213	ENST00000501412	WDR48	Q8TAF3	677 aa		21.18	■□□□□ 0.98
RAP1B-213	ENST00000501412	RERG	Q96A58	199 aa	Predicted RBP	21.18	■□□□□ 0.98
RAP1B-213	ENST00000501412	SMIM10	Q96HG1	83 aa		21.18	■□□□□ 0.98
RAP1B-213	ENST00000501412	LRRC37B	Q96QE4	947 aa		21.18	■□□□□ 0.98
RAP1B-213	ENST00000501412	SYNDIG1	Q9H7V2	258 aa		21.18	■□□□□ 0.98
RAP1B-213	ENST00000501412	NOP53	Q9NZM5	478 aa	Known RBP	21.18	■□□□□ 0.98
RAP1B-213	ENST00000501412	G3BP2	Q9UN86	482 aa	Known RBP	21.18	■□□□□ 0.98
RAP1B-213	ENST00000501412	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	21.17	■□□□□ 0.98
RAP1B-213	ENST00000501412	FOLR1	P15328	257 aa		21.17	■□□□□ 0.98
RAP1B-213	ENST00000501412	ARFIP1	P53367	373 aa		21.17	■□□□□ 0.98
RAP1B-213	ENST00000501412	RGS1	Q08116	209 aa		21.17	■□□□□ 0.98
RAP1B-213	ENST00000501412	MAD2L1	Q13257	205 aa	Predicted RBP	21.17	■□□□□ 0.98
RAP1B-213	ENST00000501412	UBAP2L	Q14157	1087 aa	Known RBP	21.17	■□□□□ 0.98
RAP1B-213	ENST00000501412	SPIDR	Q14159	915 aa		21.17	■□□□□ 0.98
RAP1B-213	ENST00000501412	GSTA3	Q16772	222 aa		21.17	■□□□□ 0.98
RAP1B-213	ENST00000501412	TOR1AIP1	Q5JTV8	583 aa		21.17	■□□□□ 0.98
RAP1B-213	ENST00000501412	FAM91A1	Q658Y4	838 aa		21.17	■□□□□ 0.98
RAP1B-213	ENST00000501412	NOXRED1	Q6NXP6	359 aa		21.17	■□□□□ 0.98
RAP1B-213	ENST00000501412	ABHD17C	Q6PCB6	329 aa		21.17	■□□□□ 0.98
RAP1B-213	ENST00000501412	CSNK1A1L	Q8N752	337 aa		21.17	■□□□□ 0.98
RAP1B-213	ENST00000501412	OR2L5	Q8NG80	312 aa		21.17	■□□□□ 0.98
RAP1B-213	ENST00000501412	CCDC106	Q9BWC9	280 aa		21.17	■□□□□ 0.98
RAP1B-213	ENST00000501412	SORBS1	Q9BX66	1292 aa	Known RBP	21.17	■□□□□ 0.98
RAP1B-213	ENST00000501412	SDR39U1	Q9NRG7	319 aa	Predicted RBP	21.17	■□□□□ 0.98
RAP1B-213	ENST00000501412	RUVBL1	Q9Y265	456 aa	Known RBP	21.17	■□□□□ 0.98
RAP1B-213	ENST00000501412	POLR3H	Q9Y535	204 aa	Predicted RBP	21.17	■□□□□ 0.98
RAP1B-213	ENST00000501412	RTCA	O00442	366 aa	Known RBP	21.16	■□□□□ 0.98
RAP1B-213	ENST00000501412	ANKRD28	O15084	1053 aa		21.16	■□□□□ 0.98
RAP1B-213	ENST00000501412	G6PD	P11413	515 aa		21.16	■□□□□ 0.98
RAP1B-213	ENST00000501412	BCKDHA	P12694	445 aa		21.16	■□□□□ 0.98
RAP1B-213	ENST00000501412	IDO1	P14902	403 aa		21.16	■□□□□ 0.98
RAP1B-213	ENST00000501412	STXBP1	P61764	594 aa	Known RBP	21.16	■□□□□ 0.98
RAP1B-213	ENST00000501412	WASHC2D	Q5SRD0	308 aa		21.16	■□□□□ 0.98
RAP1B-213	ENST00000501412	TMEM214	Q6NUQ4	689 aa	Known RBP	21.16	■□□□□ 0.98
RAP1B-213	ENST00000501412	TRPM8	Q7Z2W7	1104 aa		21.16	■□□□□ 0.98
RAP1B-213	ENST00000501412	B3GNT8	Q7Z7M8	397 aa		21.16	■□□□□ 0.98
RAP1B-213	ENST00000501412	RCBTB1	Q8NDN9	531 aa		21.16	■□□□□ 0.98
RAP1B-213	ENST00000501412	UTP15	Q8TED0	518 aa	Known RBP	21.16	■□□□□ 0.98
RAP1B-213	ENST00000501412	RGMA	Q96B86	450 aa		21.16	■□□□□ 0.98
RAP1B-213	ENST00000501412	ERP27	Q96DN0	273 aa		21.16	■□□□□ 0.98
RAP1B-213	ENST00000501412	TEFM	Q96QE5	360 aa	Known RBP	21.16	■□□□□ 0.98
RAP1B-213	ENST00000501412	ACTL8	Q9H568	366 aa		21.16	■□□□□ 0.98
RAP1B-213	ENST00000501412	PRDM7	Q9NQW5	492 aa		21.16	■□□□□ 0.98
RAP1B-213	ENST00000501412	ARMCX1	Q9P291	453 aa		21.16	■□□□□ 0.98
RAP1B-213	ENST00000501412	PCDHGA1	Q9Y5H4	931 aa		21.16	■□□□□ 0.98
RAP1B-213	ENST00000501412	CAPN14	A8MX76	684 aa		21.15	■□□□□ 0.98
RAP1B-213	ENST00000501412	ZSCAN9	O15535	394 aa	Predicted RBP	21.15	■□□□□ 0.98
RAP1B-213	ENST00000501412	RFPL3	O75679	317 aa		21.15	■□□□□ 0.98
RAP1B-213	ENST00000501412	CD1E	P15812	388 aa		21.15	■□□□□ 0.98
RAP1B-213	ENST00000501412	SDC1	P18827	310 aa		21.15	■□□□□ 0.98
RAP1B-213	ENST00000501412	GPX3	P22352	226 aa		21.15	■□□□□ 0.98
RAP1B-213	ENST00000501412	TACR1	P25103	407 aa		21.15	■□□□□ 0.98
RAP1B-213	ENST00000501412	TIA1	P31483	386 aa	Known RBP eCLIP	21.15	■□□□□ 0.98	2e-6	■■□□□ 13.2
RAP1B-213	ENST00000501412	IRX1	P78414	480 aa	Predicted RBP	21.15	■□□□□ 0.98
RAP1B-213	ENST00000501412	TRA2A	Q13595	282 aa	Known RBP eCLIP	21.15	■□□□□ 0.98
RAP1B-213	ENST00000501412	SQLE	Q14534	574 aa		21.15	■□□□□ 0.98
RAP1B-213	ENST00000501412	FOXR1	Q6PIV2	292 aa		21.15	■□□□□ 0.98
RAP1B-213	ENST00000501412	ZNF793	Q6ZN11	406 aa		21.15	■□□□□ 0.98
RAP1B-213	ENST00000501412	PARP9	Q8IXQ6	854 aa		21.15	■□□□□ 0.98
RAP1B-213	ENST00000501412	GAL3ST3	Q96A11	431 aa		21.15	■□□□□ 0.98
RAP1B-213	ENST00000501412	DDX31	Q9H8H2	851 aa	Known RBP	21.15	■□□□□ 0.98
RAP1B-213	ENST00000501412	AHSP	Q9NZD4	102 aa		21.15	■□□□□ 0.98
RAP1B-213	ENST00000501412	MRPS2	Q9Y399	296 aa	Known RBP	21.15	■□□□□ 0.98
RAP1B-213	ENST00000501412	FITM1	A5D6W6	292 aa		21.14	■□□□□ 0.98
RAP1B-213	ENST00000501412	MAP3K7	O43318	606 aa		21.14	■□□□□ 0.98
RAP1B-213	ENST00000501412	ERI3	O43414	337 aa	Known RBP	21.14	■□□□□ 0.98

Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms