RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 OGNP20774 298 aaKnown RBP13.03□□□□□ -0.32
CCDC58-207ENST00000498466 MGAT1P26572 445 aa13.03□□□□□ -0.32
CCDC58-207ENST00000498466 GRK3P35626 688 aa13.03□□□□□ -0.32
CCDC58-207ENST00000498466 SKIV2L2P42285 1042 aaKnown RBP13.03□□□□□ -0.32
CCDC58-207ENST00000498466 OLR1P78380 273 aa13.03□□□□□ -0.32
CCDC58-207ENST00000498466 FOXD4Q12950 439 aaPredicted RBP13.03□□□□□ -0.32
CCDC58-207ENST00000498466 HERC3Q15034 1050 aa13.03□□□□□ -0.32
CCDC58-207ENST00000498466 RPS6KA1Q15418 735 aa13.03□□□□□ -0.32
CCDC58-207ENST00000498466 EMC4Q5J8M3 183 aa13.03□□□□□ -0.32
CCDC58-207ENST00000498466 UBE2R2Q712K3 238 aaPredicted RBP13.03□□□□□ -0.32
CCDC58-207ENST00000498466 SPNS2Q8IVW8 549 aa13.03□□□□□ -0.32
CCDC58-207ENST00000498466 CYP4Z2PQ8N1L4 340 aa13.03□□□□□ -0.32
CCDC58-207ENST00000498466 TMEM156Q8N614 296 aa13.03□□□□□ -0.32
CCDC58-207ENST00000498466 PRELID2Q8N945 189 aa13.03□□□□□ -0.32
CCDC58-207ENST00000498466 ZFP62Q8NB50 900 aaPredicted RBP13.03□□□□□ -0.32
CCDC58-207ENST00000498466 RNF214Q8ND24 703 aa13.03□□□□□ -0.32
CCDC58-207ENST00000498466 OR52N2Q8NGI0 321 aa13.03□□□□□ -0.32
CCDC58-207ENST00000498466 OR10Q1Q8NGQ4 319 aa13.03□□□□□ -0.32
CCDC58-207ENST00000498466 PTCHD1Q96NR3 888 aa13.03□□□□□ -0.32
CCDC58-207ENST00000498466 KIFC1Q9BW19 673 aa13.03□□□□□ -0.32
CCDC58-207ENST00000498466 POLDIP3Q9BY77 421 aaKnown RBP13.03□□□□□ -0.32
CCDC58-207ENST00000498466 FAM129AQ9BZQ8 928 aa13.03□□□□□ -0.32
CCDC58-207ENST00000498466 PCBD2Q9H0N5 130 aa13.03□□□□□ -0.32
CCDC58-207ENST00000498466 DEFB127Q9H1M4 99 aa13.03□□□□□ -0.32
CCDC58-207ENST00000498466 EIF2B3Q9NR50 452 aaKnown RBP13.03□□□□□ -0.32
CCDC58-207ENST00000498466 SYBUQ9NX95 663 aa13.03□□□□□ -0.32
CCDC58-207ENST00000498466 ST6GALNAC2Q9UJ37 374 aa13.03□□□□□ -0.32
CCDC58-207ENST00000498466 REXO2Q9Y3B8 237 aaKnown RBP13.03□□□□□ -0.32
CCDC58-207ENST00000498466 HEATR5BQ9P2D3 2071 aa13.03□□□□□ -0.32
CCDC58-207ENST00000498466 TMEM200CA6NKL6 621 aa13.02□□□□□ -0.33
CCDC58-207ENST00000498466 NPIPA2E9PIF3 369 aa13.02□□□□□ -0.33
CCDC58-207ENST00000498466 NPIPA3F8WFD2 350 aa13.02□□□□□ -0.33
CCDC58-207ENST00000498466 GFYI3L273 518 aa13.02□□□□□ -0.33
CCDC58-207ENST00000498466 MPC1LP0DKB6 136 aa13.02□□□□□ -0.33
CCDC58-207ENST00000498466 RPL22P35268 128 aaKnown RBP13.02□□□□□ -0.33
CCDC58-207ENST00000498466 SKP1P63208 163 aa13.02□□□□□ -0.33
CCDC58-207ENST00000498466 BASP1P80723 227 aaKnown RBP13.02□□□□□ -0.33
CCDC58-207ENST00000498466 PAOXQ6QHF9 649 aa13.02□□□□□ -0.33
CCDC58-207ENST00000498466 CENPUQ71F23 418 aa13.02□□□□□ -0.33
CCDC58-207ENST00000498466 MDGA2Q7Z553 956 aa13.02□□□□□ -0.33
CCDC58-207ENST00000498466 C17orf64Q86WR6 236 aa13.02□□□□□ -0.33
CCDC58-207ENST00000498466 CILP2Q8IUL8 1156 aa13.02□□□□□ -0.33
CCDC58-207ENST00000498466 ZNF740Q8NDX6 193 aa13.02□□□□□ -0.33
CCDC58-207ENST00000498466 MYRIPQ8NFW9 859 aa13.02□□□□□ -0.33
CCDC58-207ENST00000498466 GIMAP7Q8NHV1 300 aa13.02□□□□□ -0.33
CCDC58-207ENST00000498466 ALKBH8Q96BT7 664 aaKnown RBP13.02□□□□□ -0.33
CCDC58-207ENST00000498466 SLC6A16Q9GZN6 736 aa13.02□□□□□ -0.33
CCDC58-207ENST00000498466 LIME1Q9H400 295 aa13.02□□□□□ -0.33
CCDC58-207ENST00000498466 SH2B3Q9UQQ2 575 aa13.02□□□□□ -0.33
CCDC58-207ENST00000498466 VPS9D1Q9Y2B5 631 aa13.02□□□□□ -0.33
CCDC58-207ENST00000498466 HCFC1P51610 2035 aa13.01□□□□□ -0.33
CCDC58-207ENST00000498466 CTAGE9A4FU28 777 aa13.01□□□□□ -0.33
CCDC58-207ENST00000498466 A8MUA0 341 aa13.01□□□□□ -0.33
CCDC58-207ENST00000498466 NDUFS4O43181 175 aa13.01□□□□□ -0.33
CCDC58-207ENST00000498466 CHST10O43529 356 aa13.01□□□□□ -0.33
CCDC58-207ENST00000498466 GALR3O60755 368 aaPredicted RBP13.01□□□□□ -0.33
CCDC58-207ENST00000498466 DNAJB6O75190 326 aa13.01□□□□□ -0.33
CCDC58-207ENST00000498466 CTAG2O75638 210 aa13.01□□□□□ -0.33
CCDC58-207ENST00000498466 CDH1P12830 882 aa13.01□□□□□ -0.33
CCDC58-207ENST00000498466 ENO3P13929 434 aaPredicted RBP13.01□□□□□ -0.33
CCDC58-207ENST00000498466 NR0B1P51843 470 aaKnown RBP13.01□□□□□ -0.33
CCDC58-207ENST00000498466 BTG2P78543 158 aa13.01□□□□□ -0.33
CCDC58-207ENST00000498466 MEF2AQ02078 507 aaPredicted RBP13.01□□□□□ -0.33
CCDC58-207ENST00000498466 DEFB134Q4QY38 66 aa13.01□□□□□ -0.33
CCDC58-207ENST00000498466 SEL1L2Q5TEA6 688 aa13.01□□□□□ -0.33
CCDC58-207ENST00000498466 CYHR1Q6ZMK1 362 aa13.01□□□□□ -0.33
CCDC58-207ENST00000498466 QSOX2Q6ZRP7 698 aa13.01□□□□□ -0.33
CCDC58-207ENST00000498466 KIAA1328Q86T90 577 aa13.01□□□□□ -0.33
CCDC58-207ENST00000498466 ZZZ3Q8IYH5 903 aa13.01□□□□□ -0.33
CCDC58-207ENST00000498466 AFAP1L2Q8N4X5 818 aa13.01□□□□□ -0.33
CCDC58-207ENST00000498466 MFSD9Q8NBP5 474 aa13.01□□□□□ -0.33
CCDC58-207ENST00000498466 ACRBPQ8NEB7 543 aa13.01□□□□□ -0.33
CCDC58-207ENST00000498466 OR5M9Q8NGP3 310 aa13.01□□□□□ -0.33
CCDC58-207ENST00000498466 CCDC68Q9H2F9 335 aa13.01□□□□□ -0.33
CCDC58-207ENST00000498466 PNPLA3Q9NST1 481 aa13.01□□□□□ -0.33
CCDC58-207ENST00000498466 INTS10Q9NVR2 710 aaKnown RBP13.01□□□□□ -0.33
CCDC58-207ENST00000498466 KLHL42Q9P2K6 505 aa13.01□□□□□ -0.33
CCDC58-207ENST00000498466 FBXW2Q9UKT8 454 aa13.01□□□□□ -0.33
CCDC58-207ENST00000498466 SOX13Q9UN79 622 aa13.01□□□□□ -0.33
CCDC58-207ENST00000498466 L3MBTL1Q9Y468 752 aa13.01□□□□□ -0.33
CCDC58-207ENST00000498466 PRRC2AP48634 2157 aaKnown RBP13.01□□□□□ -0.33
CCDC58-207ENST00000498466 TRBV11-1A0A0K0K1C0 115 aa13□□□□□ -0.33
CCDC58-207ENST00000498466 ITGA10O75578 1167 aa13□□□□□ -0.33
CCDC58-207ENST00000498466 B3GALT4O96024 378 aa13□□□□□ -0.33
CCDC58-207ENST00000498466 SERPIND1P05546 499 aa13□□□□□ -0.33
CCDC58-207ENST00000498466 F7P08709 466 aaPredicted RBP13□□□□□ -0.33
CCDC58-207ENST00000498466 ALOX12P18054 663 aa13□□□□□ -0.33
CCDC58-207ENST00000498466 PAMP19021 973 aa13□□□□□ -0.33
CCDC58-207ENST00000498466 MAOAP21397 527 aa13□□□□□ -0.33
CCDC58-207ENST00000498466 DNASE1P24855 282 aa13□□□□□ -0.33
CCDC58-207ENST00000498466 ACVR2AP27037 513 aa13□□□□□ -0.33
CCDC58-207ENST00000498466 CLCN2P51788 898 aa13□□□□□ -0.33
CCDC58-207ENST00000498466 PPIAP62937 165 aaKnown RBP13□□□□□ -0.33
CCDC58-207ENST00000498466 PLGLB1Q02325 96 aa13□□□□□ -0.33
CCDC58-207ENST00000498466 HYAL2Q12891 473 aa13□□□□□ -0.33
CCDC58-207ENST00000498466 GXYLT1Q4G148 440 aa13□□□□□ -0.33
CCDC58-207ENST00000498466 ZNF470Q6ECI4 717 aa13□□□□□ -0.33
CCDC58-207ENST00000498466 KIAA0930Q6ICG6 404 aaPredicted RBP13□□□□□ -0.33
CCDC58-207ENST00000498466 NEPROQ6NW34 567 aa13□□□□□ -0.33
CCDC58-207ENST00000498466 ZNF585AQ6P3V2 769 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms