RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 MTCP1P56278 107 aa2.76□□□□□ -1.97
SMC4-227ENST00000497984 FKBP3Q00688 224 aaKnown RBP2.76□□□□□ -1.97
SMC4-227ENST00000497984 SULT2A1Q06520 285 aa2.76□□□□□ -1.97
SMC4-227ENST00000497984 COG2Q14746 738 aa2.76□□□□□ -1.97
SMC4-227ENST00000497984 RASA2Q15283 850 aa2.76□□□□□ -1.97
SMC4-227ENST00000497984 HYAL4Q2M3T9 481 aa2.76□□□□□ -1.97
SMC4-227ENST00000497984 CYB5D1Q6P9G0 228 aa2.76□□□□□ -1.97
SMC4-227ENST00000497984 CCDC186Q7Z3E2 898 aa2.76□□□□□ -1.97
SMC4-227ENST00000497984 RNF130Q86XS8 419 aa2.76□□□□□ -1.97
SMC4-227ENST00000497984 PRSS35Q8N3Z0 413 aa2.76□□□□□ -1.97
SMC4-227ENST00000497984 CSNK1G2-AS1Q8NCQ2 148 aa2.76□□□□□ -1.97
SMC4-227ENST00000497984 MRAPQ8TCY5 172 aa2.76□□□□□ -1.97
SMC4-227ENST00000497984 NSMAFQ92636 917 aa2.76□□□□□ -1.97
SMC4-227ENST00000497984 SECISBP2LQ93073 1101 aaKnown RBP2.76□□□□□ -1.97
SMC4-227ENST00000497984 PYCR2Q96C36 320 aa2.76□□□□□ -1.97
SMC4-227ENST00000497984 RMDN1Q96DB5 314 aa2.76□□□□□ -1.97
SMC4-227ENST00000497984 GDAP1L1Q96MZ0 367 aa2.76□□□□□ -1.97
SMC4-227ENST00000497984 ZNF558Q96NG5 402 aa2.76□□□□□ -1.97
SMC4-227ENST00000497984 NDNQ99608 321 aa2.76□□□□□ -1.97
SMC4-227ENST00000497984 CCDC28BQ9BUN5 200 aa2.76□□□□□ -1.97
SMC4-227ENST00000497984 RNF121Q9H920 327 aa2.76□□□□□ -1.97
SMC4-227ENST00000497984 NLGN3Q9NZ94 848 aa2.76□□□□□ -1.97
SMC4-227ENST00000497984 LIPGQ9Y5X9 500 aa2.76□□□□□ -1.97
SMC4-227ENST00000497984 A0A087WV48 116 aa2.75□□□□□ -1.97
SMC4-227ENST00000497984 FAM220BPB1ANY3 271 aa2.75□□□□□ -1.97
SMC4-227ENST00000497984 TBX10O75333 385 aa2.75□□□□□ -1.97
SMC4-227ENST00000497984 SAP30O75446 220 aa2.75□□□□□ -1.97
SMC4-227ENST00000497984 C9P02748 559 aa2.75□□□□□ -1.97
SMC4-227ENST00000497984 THY1P04216 161 aa2.75□□□□□ -1.97
SMC4-227ENST00000497984 LDHCP07864 332 aa2.75□□□□□ -1.97
SMC4-227ENST00000497984 PCP11498 1178 aaKnown RBP2.75□□□□□ -1.97
SMC4-227ENST00000497984 FDPSP14324 419 aaKnown RBP2.75□□□□□ -1.97
SMC4-227ENST00000497984 C4BPBP20851 252 aa2.75□□□□□ -1.97
SMC4-227ENST00000497984 AZGP1P25311 298 aaKnown RBP2.75□□□□□ -1.97
SMC4-227ENST00000497984 PKLRP30613 574 aa2.75□□□□□ -1.97
SMC4-227ENST00000497984 ALDH1B1P30837 517 aa2.75□□□□□ -1.97
SMC4-227ENST00000497984 NDST2P52849 883 aa2.75□□□□□ -1.97
SMC4-227ENST00000497984 DUSP5Q16690 384 aa2.75□□□□□ -1.97
SMC4-227ENST00000497984 UGCGQ16739 394 aa2.75□□□□□ -1.97
SMC4-227ENST00000497984 FAM106AQ4KMX7 169 aa2.75□□□□□ -1.97
SMC4-227ENST00000497984 C6orf136Q5SQH8 315 aa2.75□□□□□ -1.97
SMC4-227ENST00000497984 RSBN1Q5VWQ0 802 aaPredicted RBP2.75□□□□□ -1.97
SMC4-227ENST00000497984 FUT10Q6P4F1 479 aa2.75□□□□□ -1.97
SMC4-227ENST00000497984 ERN2Q76MJ5 926 aaKnown RBP2.75□□□□□ -1.97
SMC4-227ENST00000497984 GPR141Q7Z602 305 aa2.75□□□□□ -1.97
SMC4-227ENST00000497984 TCEANCQ8N8B7 351 aa2.75□□□□□ -1.97
SMC4-227ENST00000497984 LSMEM1Q8N8F7 131 aa2.75□□□□□ -1.97
SMC4-227ENST00000497984 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.75□□□□□ -1.97
SMC4-227ENST00000497984 SERAC1Q96JX3 654 aa2.75□□□□□ -1.97
SMC4-227ENST00000497984 IL12RB2Q99665 862 aa2.75□□□□□ -1.97
SMC4-227ENST00000497984 PI4K2AQ9BTU6 479 aa2.75□□□□□ -1.97
SMC4-227ENST00000497984 YTHDF1Q9BYJ9 559 aaKnown RBP2.75□□□□□ -1.97
SMC4-227ENST00000497984 IARS2Q9NSE4 1012 aaKnown RBP2.75□□□□□ -1.97
SMC4-227ENST00000497984 C5AR2Q9P296 337 aa2.75□□□□□ -1.97
SMC4-227ENST00000497984 IKZF3Q9UKT9 509 aa2.75□□□□□ -1.97
SMC4-227ENST00000497984 hCG_38984A0A1B0GV85 526 aa2.74□□□□□ -1.97
SMC4-227ENST00000497984 URADA6NGE7 173 aa2.74□□□□□ -1.97
SMC4-227ENST00000497984 OGTO15294 1046 aa2.74□□□□□ -1.97
SMC4-227ENST00000497984 GPR183P32249 361 aa2.74□□□□□ -1.97
SMC4-227ENST00000497984 CDX1P47902 265 aaPredicted RBP2.74□□□□□ -1.97
SMC4-227ENST00000497984 RGS7P49802 495 aa2.74□□□□□ -1.97
SMC4-227ENST00000497984 PPP5CP53041 499 aa2.74□□□□□ -1.97
SMC4-227ENST00000497984 RAD23AP54725 363 aa2.74□□□□□ -1.97
SMC4-227ENST00000497984 CLDN17P56750 224 aa2.74□□□□□ -1.97
SMC4-227ENST00000497984 KIAA0141Q14154 515 aaPredicted RBP2.74□□□□□ -1.97
SMC4-227ENST00000497984 UPP1Q16831 310 aa2.74□□□□□ -1.97
SMC4-227ENST00000497984 KRBOX4Q5JUW0 171 aa2.74□□□□□ -1.97
SMC4-227ENST00000497984 SPOUT1Q5T280 376 aaKnown RBP2.74□□□□□ -1.97
SMC4-227ENST00000497984 OR4C11Q6IEV9 310 aa2.74□□□□□ -1.97
SMC4-227ENST00000497984 RPUSD3Q6P087 351 aaKnown RBP2.74□□□□□ -1.97
SMC4-227ENST00000497984 TTC27Q6P3X3 843 aa2.74□□□□□ -1.97
SMC4-227ENST00000497984 MACC1Q6ZN28 852 aa2.74□□□□□ -1.97
SMC4-227ENST00000497984 C11orf57Q6ZUT1 292 aaPredicted RBP2.74□□□□□ -1.97
SMC4-227ENST00000497984 NRARPQ7Z6K4 114 aa2.74□□□□□ -1.97
SMC4-227ENST00000497984 ABI3BPQ7Z7G0 1075 aa2.74□□□□□ -1.97
SMC4-227ENST00000497984 PRUNE1Q86TP1 453 aa2.74□□□□□ -1.97
SMC4-227ENST00000497984 ANKRD13CQ8N6S4 541 aa2.74□□□□□ -1.97
SMC4-227ENST00000497984 CCDC63Q8NA47 563 aa2.74□□□□□ -1.97
SMC4-227ENST00000497984 OR6J1Q8NGC5 347 aa2.74□□□□□ -1.97
SMC4-227ENST00000497984 GRK7Q8WTQ7 553 aa2.74□□□□□ -1.97
SMC4-227ENST00000497984 SSC4DQ8WTU2 575 aa2.74□□□□□ -1.97
SMC4-227ENST00000497984 C11orf52Q96A22 123 aa2.74□□□□□ -1.97
SMC4-227ENST00000497984 NAA11Q9BSU3 229 aaPredicted RBP2.74□□□□□ -1.97
SMC4-227ENST00000497984 GTPBP2Q9BX10 602 aaKnown RBP2.74□□□□□ -1.97
SMC4-227ENST00000497984 SNX25Q9H3E2 840 aa2.74□□□□□ -1.97
SMC4-227ENST00000497984 RIMS4Q9H426 269 aaPredicted RBP2.74□□□□□ -1.97
SMC4-227ENST00000497984 SWAP70Q9UH65 585 aa2.74□□□□□ -1.97
SMC4-227ENST00000497984 SLC12A6Q9UHW9 1150 aa2.74□□□□□ -1.97
SMC4-227ENST00000497984 SNX7Q9UNH6 387 aa2.74□□□□□ -1.97
SMC4-227ENST00000497984 A0A1W2PPW3 197 aa2.73□□□□□ -1.97
SMC4-227ENST00000497984 A8MVM7 634 aa2.73□□□□□ -1.97
SMC4-227ENST00000497984 TMEM150CB9EJG8 249 aa2.73□□□□□ -1.97
SMC4-227ENST00000497984 LY6G6DO95868 133 aa2.73□□□□□ -1.97
SMC4-227ENST00000497984 SPP1P10451 314 aa2.73□□□□□ -1.97
SMC4-227ENST00000497984 AOC1P19801 751 aa2.73□□□□□ -1.97
SMC4-227ENST00000497984 OR3A3P47888 321 aa2.73□□□□□ -1.97
SMC4-227ENST00000497984 IL10RBQ08334 325 aa2.73□□□□□ -1.97
SMC4-227ENST00000497984 MZT1Q08AG7 82 aa2.73□□□□□ -1.97
SMC4-227ENST00000497984 GRB14Q14449 540 aa2.73□□□□□ -1.97
SMC4-227ENST00000497984 ZNF273Q14593 569 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms