RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 PKP4Q99569 1192 aa15.39■□□□□ 0.05
VIM-208ENST00000497849 DMRT3Q9NQL9 472 aa15.39■□□□□ 0.05
VIM-208ENST00000497849 E7ENX8 843 aa15.38■□□□□ 0.05
VIM-208ENST00000497849 PSMD3O43242 534 aa15.38■□□□□ 0.05
VIM-208ENST00000497849 RPS3P23396 243 aaKnown RBP eCLIP15.38■□□□□ 0.051e-43■□□□□ 10.4
VIM-208ENST00000497849 ADRA1DP25100 572 aa15.38■□□□□ 0.05
VIM-208ENST00000497849 PTPN7P35236 360 aa15.38■□□□□ 0.05
VIM-208ENST00000497849 GRIA1P42261 906 aa15.38■□□□□ 0.05
VIM-208ENST00000497849 TTPAP49638 278 aa15.38■□□□□ 0.05
VIM-208ENST00000497849 RWDD2BP57060 319 aa15.38■□□□□ 0.05
VIM-208ENST00000497849 PRAMEP78395 509 aa15.38■□□□□ 0.05
VIM-208ENST00000497849 ABATP80404 500 aa15.38■□□□□ 0.05
VIM-208ENST00000497849 MPP1Q00013 466 aa15.38■□□□□ 0.05
VIM-208ENST00000497849 TAP2Q03519 686 aa15.38■□□□□ 0.05
VIM-208ENST00000497849 RPS6KA1Q15418 735 aa15.38■□□□□ 0.05
VIM-208ENST00000497849 P3H1Q32P28 736 aa15.38■□□□□ 0.05
VIM-208ENST00000497849 AARS2Q5JTZ9 985 aaKnown RBP15.38■□□□□ 0.05
VIM-208ENST00000497849 CTSL3PQ5NE16 218 aa15.38■□□□□ 0.05
VIM-208ENST00000497849 LINC00523Q86TU6 105 aa15.38■□□□□ 0.05
VIM-208ENST00000497849 ZCCHC10Q8TBK6 192 aa15.38■□□□□ 0.05
VIM-208ENST00000497849 ZNF480Q8WV37 535 aa15.38■□□□□ 0.05
VIM-208ENST00000497849 DEPPQ9NTK1 212 aa15.38■□□□□ 0.05
VIM-208ENST00000497849 CATSPERZQ9NTU4 200 aa15.38■□□□□ 0.05
VIM-208ENST00000497849 ABCF3Q9NUQ8 709 aa15.38■□□□□ 0.05
VIM-208ENST00000497849 ANAPC5Q9UJX4 755 aa15.38■□□□□ 0.05
VIM-208ENST00000497849 KCNE1BA0A087WTH5 132 aa15.37■□□□□ 0.05
VIM-208ENST00000497849 PINLYPA6NC86 204 aa15.37■□□□□ 0.05
VIM-208ENST00000497849 KIF5CO60282 957 aa15.37■□□□□ 0.05
VIM-208ENST00000497849 PSIP1O75475 530 aaKnown RBP15.37■□□□□ 0.05
VIM-208ENST00000497849 LY6G6DO95868 133 aa15.37■□□□□ 0.05
VIM-208ENST00000497849 SLC16A8O95907 504 aa15.37■□□□□ 0.05
VIM-208ENST00000497849 GNG11P61952 73 aa15.37■□□□□ 0.05
VIM-208ENST00000497849 TYSND1Q2T9J0 566 aa15.37■□□□□ 0.05
VIM-208ENST00000497849 ZNF585AQ6P3V2 769 aa15.37■□□□□ 0.05
VIM-208ENST00000497849 B3GNT6Q6ZMB0 384 aa15.37■□□□□ 0.05
VIM-208ENST00000497849 CHSY3Q70JA7 882 aa15.37■□□□□ 0.05
VIM-208ENST00000497849 LRRC56Q8IYG6 542 aaPredicted RBP15.37■□□□□ 0.05
VIM-208ENST00000497849 KCT2Q8NC54 265 aa15.37■□□□□ 0.05
VIM-208ENST00000497849 TRIM58Q8NG06 486 aa15.37■□□□□ 0.05
VIM-208ENST00000497849 OR5T3Q8NGG3 340 aa15.37■□□□□ 0.05
VIM-208ENST00000497849 TM4SF19Q96DZ7 209 aa15.37■□□□□ 0.05
VIM-208ENST00000497849 OR1F2PQ96R84 312 aa15.37■□□□□ 0.05
VIM-208ENST00000497849 ANKHQ9HCJ1 492 aa15.37■□□□□ 0.05
VIM-208ENST00000497849 CBLCQ9ULV8 474 aa15.37■□□□□ 0.05
VIM-208ENST00000497849 NAALAD2Q9Y3Q0 740 aa15.37■□□□□ 0.05
VIM-208ENST00000497849 ZANQ9Y493 2812 aa15.37■□□□□ 0.05
VIM-208ENST00000497849 ARHGAP21Q5T5U3 1957 aa15.36■□□□□ 0.05
VIM-208ENST00000497849 EML6Q6ZMW3 1958 aa15.36■□□□□ 0.05
VIM-208ENST00000497849 ZNF860A6NHJ4 632 aa15.36■□□□□ 0.05
VIM-208ENST00000497849 MIF4GDA9UHW6 222 aaKnown RBP15.36■□□□□ 0.05
VIM-208ENST00000497849 SMAPO00193 183 aa15.36■□□□□ 0.05
VIM-208ENST00000497849 FCHO1O14526 889 aa15.36■□□□□ 0.05
VIM-208ENST00000497849 CD3EAPO15446 510 aaKnown RBP15.36■□□□□ 0.05
VIM-208ENST00000497849 DNAJB6O75190 326 aa15.36■□□□□ 0.05
VIM-208ENST00000497849 IL10P22301 178 aa15.36■□□□□ 0.05
VIM-208ENST00000497849 ATP5DP30049 168 aa15.36■□□□□ 0.05
VIM-208ENST00000497849 EIF3BP55884 814 aaKnown RBP15.36■□□□□ 0.05
VIM-208ENST00000497849 KEAP1Q14145 624 aa15.36■□□□□ 0.05
VIM-208ENST00000497849 SLC25A35Q3KQZ1 300 aa15.36■□□□□ 0.05
VIM-208ENST00000497849 PAOXQ6QHF9 649 aa15.36■□□□□ 0.05
VIM-208ENST00000497849 CYP4Z2PQ8N1L4 340 aa15.36■□□□□ 0.05
VIM-208ENST00000497849 UBL4BQ8N7F7 174 aa15.36■□□□□ 0.05
VIM-208ENST00000497849 NFAM1Q8NET5 270 aaPredicted RBP15.36■□□□□ 0.05
VIM-208ENST00000497849 FAM136AQ96C01 138 aa15.36■□□□□ 0.05
VIM-208ENST00000497849 BIRC8Q96P09 236 aa15.36■□□□□ 0.05
VIM-208ENST00000497849 EBNA1BP2Q99848 306 aaKnown RBP15.36■□□□□ 0.05
VIM-208ENST00000497849 ZDHHC11Q9H8X9 412 aa15.36■□□□□ 0.05
VIM-208ENST00000497849 GALPQ9UBC7 116 aa15.36■□□□□ 0.05
VIM-208ENST00000497849 TCAF1Q9Y4C2 921 aa15.36■□□□□ 0.05
VIM-208ENST00000497849 LIPGQ9Y5X9 500 aa15.36■□□□□ 0.05
VIM-208ENST00000497849 SAGE2PA6NJ88 616 aa15.35■□□□□ 0.05
VIM-208ENST00000497849 FIGNL2A6NMB9 653 aa15.35■□□□□ 0.05
VIM-208ENST00000497849 NIPSNAP2O75323 286 aa15.35■□□□□ 0.05
VIM-208ENST00000497849 ZNF189O75820 626 aaPredicted RBP15.35■□□□□ 0.05
VIM-208ENST00000497849 FHP07954 510 aa15.35■□□□□ 0.05
VIM-208ENST00000497849 CXCR5P32302 372 aa15.35■□□□□ 0.05
VIM-208ENST00000497849 HSD17B2P37059 387 aa15.35■□□□□ 0.05
VIM-208ENST00000497849 RPS15AP62244 130 aaKnown RBP15.35■□□□□ 0.05
VIM-208ENST00000497849 PPIAP62937 165 aaKnown RBP15.35■□□□□ 0.05
VIM-208ENST00000497849 FLYWCH1Q4VC44 716 aa15.35■□□□□ 0.05
VIM-208ENST00000497849 ACSBG2Q5FVE4 666 aa15.35■□□□□ 0.05
VIM-208ENST00000497849 WDR53Q7Z5U6 358 aaPredicted RBP15.35■□□□□ 0.05
VIM-208ENST00000497849 LRRC6Q86X45 466 aa15.35■□□□□ 0.05
VIM-208ENST00000497849 LRRN4CLQ8ND94 238 aa15.35■□□□□ 0.05
VIM-208ENST00000497849 SLCO2A1Q92959 643 aa15.35■□□□□ 0.05
VIM-208ENST00000497849 PEX13Q92968 403 aa15.35■□□□□ 0.05
VIM-208ENST00000497849 SMC6Q96SB8 1091 aa15.35■□□□□ 0.05
VIM-208ENST00000497849 DEFB126Q9BYW3 111 aa15.35■□□□□ 0.05
VIM-208ENST00000497849 TMEM184CQ9NVA4 438 aa15.35■□□□□ 0.05
VIM-208ENST00000497849 TCRBV7S2A1N4TA0A589 114 aa15.34■□□□□ 0.05
VIM-208ENST00000497849 OR14I1A6ND48 311 aa15.34■□□□□ 0.05
VIM-208ENST00000497849 FAM166BA8MTA8 275 aa15.34■□□□□ 0.05
VIM-208ENST00000497849 SYT5O00445 386 aa15.34■□□□□ 0.05
VIM-208ENST00000497849 BCKDKO14874 412 aa15.34■□□□□ 0.05
VIM-208ENST00000497849 TJP3O95049 919 aa15.34■□□□□ 0.05
VIM-208ENST00000497849 GAS8O95995 478 aa15.34■□□□□ 0.05
VIM-208ENST00000497849 PCSK6P29122 969 aa15.34■□□□□ 0.05
VIM-208ENST00000497849 UQCRC1P31930 480 aa15.34■□□□□ 0.05
VIM-208ENST00000497849 KCNJ11Q14654 390 aa15.34■□□□□ 0.05
VIM-208ENST00000497849 DAZAP2Q15038 168 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms