RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 C5orf66Q9H5L9 145 aa3.54□□□□□ -1.84
SMC4-225ENST00000497203 MAGEF1Q9HAY2 307 aa3.54□□□□□ -1.84
SMC4-225ENST00000497203 MIS18AQ9NYP9 233 aa3.54□□□□□ -1.84
SMC4-225ENST00000497203 HACD3Q9P035 362 aa3.54□□□□□ -1.84
SMC4-225ENST00000497203 MOSPD1Q9UJG1 213 aa3.54□□□□□ -1.84
SMC4-225ENST00000497203 ZNF510Q9Y2H8 683 aa3.54□□□□□ -1.84
SMC4-225ENST00000497203 WDR37Q9Y2I8 494 aa3.54□□□□□ -1.84
SMC4-225ENST00000497203 TRBV4-1A0A0J9YWV2 114 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 NKX6-3A6NJ46 265 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 HHLA1C9JL84 531 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 SLC1A7O00341 560 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 ZBTB14O43829 449 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 ACSL4O60488 711 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 GAS8-AS1O95177 125 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 MT-ND3P03897 115 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 CD48P09326 243 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 PATE4P0C8F1 98 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 CFC1BP0CG36 223 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 CFC1P0CG37 223 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 P4HA1P13674 534 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 CEBPBP17676 345 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 OR3A2P47893 321 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 NT5C2P49902 561 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 NR0B1P51843 470 aaKnown RBP3.53□□□□□ -1.84
SMC4-225ENST00000497203 OR1D5P58170 312 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 FKBP1BP68106 108 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 SP3Q02447 781 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 LCP2Q13094 533 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 ITGA9Q13797 1035 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 GRB14Q14449 540 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 LASP1Q14847 261 aaKnown RBP3.53□□□□□ -1.84
SMC4-225ENST00000497203 EFTUD2Q15029 972 aaKnown RBP eCLIP3.53□□□□□ -1.84
SMC4-225ENST00000497203 OR4C11Q6IEV9 310 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 ETFRF1Q6IPR1 90 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 PLBD1Q6P4A8 553 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 ALKBH5Q6P6C2 394 aaKnown RBP3.53□□□□□ -1.84
SMC4-225ENST00000497203 FIP1L1Q6UN15 594 aaKnown RBP3.53□□□□□ -1.84
SMC4-225ENST00000497203 GSG1LQ6UXU4 331 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 SIGLEC15Q6ZMC9 328 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 LACC1Q8IV20 430 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 KLHDC8BQ8IXV7 354 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 CHCHD4Q8N4Q1 142 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 TCEANCQ8N8B7 351 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 ARL10Q8N8L6 244 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 FAM76AQ8TAV0 307 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 MAPK15Q8TD08 544 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 MRGPRDQ8TDS7 321 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 CHURC1Q8WUH1 139 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 GGHQ92820 318 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 RFT1Q96AA3 541 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 ULK4Q96C45 1275 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 ZNF501Q96CX3 271 aaPredicted RBP3.53□□□□□ -1.84
SMC4-225ENST00000497203 NXPE2Q96DL1 559 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 IL12RB2Q99665 862 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 PI4K2AQ9BTU6 479 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 FSD1Q9BTV5 496 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 LRRC2Q9BYS8 371 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 TRIM7Q9C029 511 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 SLC39A8Q9C0K1 460 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 TSPYL1Q9H0U9 437 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 HMG20BQ9P0W2 317 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 POLKQ9UBT6 870 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 ERRFI1Q9UJM3 462 aaPredicted RBP3.53□□□□□ -1.84
SMC4-225ENST00000497203 SATB2Q9UPW6 733 aa3.53□□□□□ -1.84
SMC4-225ENST00000497203 RNF123Q5XPI4 1314 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 A0A0U1RQG5 324 aaPredicted RBP3.52□□□□□ -1.85
SMC4-225ENST00000497203 MTMR11A4FU01 709 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 SAP30O75446 220 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 GAS8O95995 478 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 MT-ND2P03891 347 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 HMOX1P09601 288 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 GNB3P16520 340 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 FERP16591 822 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 HLA-FP30511 346 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 SRD5A2P31213 254 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 SLC1A3P43003 542 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 LEPRP48357 1165 aaKnown RBP3.52□□□□□ -1.85
SMC4-225ENST00000497203 CLCN4P51793 760 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 PAX9P55771 341 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 SNRPD1P62314 119 aaKnown RBP3.52□□□□□ -1.85
SMC4-225ENST00000497203 GUCY2DQ02846 1103 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 CDH18Q13634 790 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 HNRNPDQ14103 355 aaKnown RBP3.52□□□□□ -1.85
SMC4-225ENST00000497203 TMEM132DQ14C87 1099 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 TAB1Q15750 504 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 DUSP5Q16690 384 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 SGSM1Q2NKQ1 1148 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 TCEAL6Q6IPX3 200 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 SLC27A4Q6P1M0 643 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 CD164L2Q6UWJ8 174 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 TOM1L2Q6ZVM7 507 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 BTN2A1Q7KYR7 527 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 ASPGQ86U10 573 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 HOGA1Q86XE5 327 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 CNTN4Q8IWV2 1026 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 PEX5LQ8IYB4 626 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 TDHQ8IZJ6 230 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 THEM5Q8N1Q8 247 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 RTL3Q8N8U3 475 aaKnown RBP3.52□□□□□ -1.85
SMC4-225ENST00000497203 SMYD1Q8NB12 490 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms