RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 AHSPQ9NZD4 102 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 SPASTQ9UBP0 616 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 TPRKBQ9Y3C4 175 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 HEMK1Q9Y5R4 338 aaPredicted RBP10.63□□□□□ -0.71
CMSS1-208ENST00000496116 A0A1W2PPW3 197 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 ANKRD33BA6NCL7 494 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 OTOL1A6NHN0 477 aaPredicted RBP10.63□□□□□ -0.71
CMSS1-208ENST00000496116 PTGES3LE9PB15 166 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 SAP18O00422 153 aaKnown RBP10.63□□□□□ -0.71
CMSS1-208ENST00000496116 GPR37L1O60883 481 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 GBAP04062 536 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 PRIM2P49643 509 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 CXCR4P61073 352 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 SELENOWP63302 87 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 KCNJ10P78508 379 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 MEF2AQ02078 507 aaPredicted RBP10.63□□□□□ -0.71
CMSS1-208ENST00000496116 PDE7AQ13946 482 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 SIM2Q14190 667 aaPredicted RBP10.63□□□□□ -0.71
CMSS1-208ENST00000496116 ELOAQ14241 798 aaKnown RBP10.63□□□□□ -0.71
CMSS1-208ENST00000496116 LAPTM4AQ15012 233 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 PDGFRLQ15198 375 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 GAB4Q2WGN9 574 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 ZNF385BQ569K4 471 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 TRIM40Q6P9F5 258 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 XKR5Q6UX68 686 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 TMIGD1Q6UXZ0 262 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 IKBIPQ70UQ0 350 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 C11orf96Q7Z7L8 435 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 PDZD3Q86UT5 571 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 OXR1Q8N573 874 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 OR52N2Q8NGI0 321 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 LZICQ8WZA0 190 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 MAL2Q969L2 176 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 BARD1Q99728 777 aaKnown RBP10.63□□□□□ -0.71
CMSS1-208ENST00000496116 CCDC90BQ9GZT6 254 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 NAA50Q9GZZ1 169 aaKnown RBP10.63□□□□□ -0.71
CMSS1-208ENST00000496116 OR52A5Q9H2C5 316 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 PLGRKTQ9HBL7 147 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 WBP1LQ9NX94 342 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 WARS2Q9UGM6 360 aaKnown RBP10.63□□□□□ -0.71
CMSS1-208ENST00000496116 RAPGEFL1Q9UHV5 662 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 EXO1Q9UQ84 846 aaKnown RBP10.63□□□□□ -0.71
CMSS1-208ENST00000496116 NAALAD2Q9Y3Q0 740 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 ADAMDEC1O15204 470 aa10.62□□□□□ -0.71
CMSS1-208ENST00000496116 C6orf47O95873 294 aa10.62□□□□□ -0.71
CMSS1-208ENST00000496116 KLK1P06870 262 aa10.62□□□□□ -0.71
CMSS1-208ENST00000496116 EPHX1P07099 455 aa10.62□□□□□ -0.71
CMSS1-208ENST00000496116 CYP4B1P13584 511 aa10.62□□□□□ -0.71
CMSS1-208ENST00000496116 ITIH1P19827 911 aa10.62□□□□□ -0.71
CMSS1-208ENST00000496116 AQP1P29972 269 aa10.62□□□□□ -0.71
CMSS1-208ENST00000496116 HSD17B2P37059 387 aa10.62□□□□□ -0.71
CMSS1-208ENST00000496116 P2RY2P41231 377 aa10.62□□□□□ -0.71
CMSS1-208ENST00000496116 PLA2G16P53816 162 aa10.62□□□□□ -0.71
CMSS1-208ENST00000496116 TAS2R50P59544 299 aa10.62□□□□□ -0.71
CMSS1-208ENST00000496116 FGD3Q5JSP0 725 aa10.62□□□□□ -0.71
CMSS1-208ENST00000496116 GCNT6Q5T4J0 391 aa10.62□□□□□ -0.71
CMSS1-208ENST00000496116 FAM46CQ5VWP2 391 aa10.62□□□□□ -0.71
CMSS1-208ENST00000496116 KIAA1614Q5VZ46 1190 aa10.62□□□□□ -0.71
CMSS1-208ENST00000496116 GTF2IRD2BQ6EKJ0 949 aa10.62□□□□□ -0.71
CMSS1-208ENST00000496116 FAM71E1Q6IPT2 247 aa10.62□□□□□ -0.71
CMSS1-208ENST00000496116 LAIR2Q6ISS4 152 aa10.62□□□□□ -0.71
CMSS1-208ENST00000496116 ADAMTSL4Q6UY14 1074 aa10.62□□□□□ -0.71
CMSS1-208ENST00000496116 GTF2IRD2Q86UP8 949 aa10.62□□□□□ -0.71
CMSS1-208ENST00000496116 LRRTM4Q86VH4 590 aa10.62□□□□□ -0.71
CMSS1-208ENST00000496116 TSPYL5Q86VY4 417 aaPredicted RBP10.62□□□□□ -0.71
CMSS1-208ENST00000496116 C12orf76Q8N812 135 aaPredicted RBP10.62□□□□□ -0.71
CMSS1-208ENST00000496116 CNIH3Q8TBE1 160 aa10.62□□□□□ -0.71
CMSS1-208ENST00000496116 MUL1Q969V5 352 aa10.62□□□□□ -0.71
CMSS1-208ENST00000496116 COX14Q96I36 57 aa10.62□□□□□ -0.71
CMSS1-208ENST00000496116 C7orf34Q96L11 122 aa10.62□□□□□ -0.71
CMSS1-208ENST00000496116 GPN2Q9H9Y4 310 aaPredicted RBP10.62□□□□□ -0.71
CMSS1-208ENST00000496116 MIEF1Q9NQG6 463 aa10.62□□□□□ -0.71
CMSS1-208ENST00000496116 OBP2AQ9NY56 170 aa10.62□□□□□ -0.71
CMSS1-208ENST00000496116 TAS2R9Q9NYW1 312 aa10.62□□□□□ -0.71
CMSS1-208ENST00000496116 PCDHGB3Q9Y5G1 929 aa10.62□□□□□ -0.71
CMSS1-208ENST00000496116 KRT75O95678 551 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 IFNA14P01570 189 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 HTR1AP08908 422 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 FSHRP23945 695 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 CXCR2P25025 360 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 CHI3L1P36222 383 aaPredicted RBP10.61□□□□□ -0.71
CMSS1-208ENST00000496116 STT3AP46977 705 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 CLK3P49761 638 aaKnown RBP10.61□□□□□ -0.71
CMSS1-208ENST00000496116 NFATC3Q12968 1075 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 ARHGAP19Q14CB8 494 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 PNCKQ6P2M8 343 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 C17orf64Q86WR6 236 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 OR5AR1Q8NGP9 310 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 WDR48Q8TAF3 677 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 SPPL2AQ8TCT8 520 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 SGCDQ92629 289 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 TFGQ92734 400 aaPredicted RBP10.61□□□□□ -0.71
CMSS1-208ENST00000496116 FGF13Q92913 245 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 ZNF347Q96SE7 839 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 DGCR6LQ9BY27 220 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 SPNS1Q9H2V7 528 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 TMEM38AQ9H6F2 299 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 PSME2Q9UL46 239 aa10.61□□□□□ -0.71
CMSS1-208ENST00000496116 NDRG4Q9ULP0 352 aaKnown RBP10.61□□□□□ -0.71
CMSS1-208ENST00000496116 TDRKHQ9Y2W6 561 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms