RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 RHBDD1Q8TEB9 315 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 CHTF18Q8WVB6 975 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 LZICQ8WZA0 190 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 SLC22A18Q96BI1 424 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 BIRC7Q96CA5 298 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 OR4K3Q96R72 315 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 APOOQ9BUR5 198 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 FAIM2Q9BWQ8 316 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 OSBPL10Q9BXB5 764 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 TSPAN10Q9H1Z9 355 aaPredicted RBP6.65□□□□□ -1.34
USP39-219ENST00000496047 S1PR5Q9H228 398 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 PIF1Q9H611 641 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 COQ10BQ9H8M1 238 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 WASH6PQ9NQA3 447 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 IMP3Q9NV31 184 aaKnown RBP6.65□□□□□ -1.34
USP39-219ENST00000496047 GEMIN8Q9NWZ8 242 aaKnown RBP6.65□□□□□ -1.34
USP39-219ENST00000496047 ADPRHL2Q9NX46 363 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 SMPD3Q9NY59 655 aaPredicted RBP6.65□□□□□ -1.34
USP39-219ENST00000496047 SH3BP4Q9P0V3 963 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 IFT80Q9P2H3 777 aaPredicted RBP6.65□□□□□ -1.34
USP39-219ENST00000496047 SPASTQ9UBP0 616 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 TAC3Q9UHF0 121 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 ATP6V1HQ9UI12 483 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 MBD1Q9UIS9 605 aaPredicted RBP6.65□□□□□ -1.34
USP39-219ENST00000496047 PADI4Q9UM07 663 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 ZNF232Q9UNY5 417 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 PCDHB14Q9Y5E9 798 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 PCDHGA2Q9Y5H1 932 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 PIAS3Q9Y6X2 628 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 BAHCC1Q9P281 2608 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 TMEM131Q92545 1883 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 SCN2AQ99250 2005 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 SCN3AQ9NY46 2000 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 PRUNE2Q8WUY3 3088 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 ANHXE9PGG2 379 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 K7EQS6 105 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 RFXAPO00287 272 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 SH3BP5O60239 455 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 PAK4O96013 591 aaPredicted RBP6.64□□□□□ -1.35
USP39-219ENST00000496047 TGFB1P01137 390 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 FOSL2P15408 326 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 NPPBP16860 134 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 ENGP17813 658 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 CD22P20273 847 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 HNRNPA2B1P22626 353 aaKnown RBP6.64□□□□□ -1.35
USP39-219ENST00000496047 SHMT2P34897 504 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 SOAT1P35610 550 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 IGFALSP35858 605 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 CHI3L1P36222 383 aaPredicted RBP6.64□□□□□ -1.35
USP39-219ENST00000496047 NUDT1P36639 197 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 SOX9P48436 509 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 RNF144AP50876 292 aaPredicted RBP6.64□□□□□ -1.35
USP39-219ENST00000496047 ARFIP1P53367 373 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 MAPK12P53778 367 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 RAD23AP54725 363 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 EPHA4P54764 986 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 TAS2R38P59533 333 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 YPEL5P62699 121 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 TRA2BP62995 288 aaKnown RBP6.64□□□□□ -1.35
USP39-219ENST00000496047 TXNL4AP83876 142 aaKnown RBP6.64□□□□□ -1.35
USP39-219ENST00000496047 RBBP4Q09028 425 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 C2orf80Q0P641 193 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 FADDQ13158 208 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 VEZF1Q14119 521 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 MYBPC3Q14896 1274 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 PON2Q15165 354 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 UGT8Q16880 541 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 LRRC23Q53EV4 343 aaPredicted RBP6.64□□□□□ -1.35
USP39-219ENST00000496047 TMEM196Q5HYL7 178 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 CATSPEREQ5SY80 951 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 CCNYL2Q5T2Q4 361 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 FAM219BQ5XKK7 198 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 CPZQ66K79 652 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 MRPL14Q6P1L8 145 aaKnown RBP6.64□□□□□ -1.35
USP39-219ENST00000496047 COMMD6Q7Z4G1 85 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 C11orf96Q7Z7L8 435 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 ANKRD46Q86W74 232 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 TRIM69Q86WT6 500 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 HIPK1Q86Z02 1210 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 TRIM48Q8IWZ4 208 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 RIMKLAQ8IXN7 391 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 METTL4Q8N3J2 472 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 ZCCHC7Q8N3Z6 543 aaKnown RBP6.64□□□□□ -1.35
USP39-219ENST00000496047 DHRSXQ8N5I4 330 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 C11orf65Q8NCR3 313 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 SMRP1Q8NCR6 262 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 OR2L8Q8NGY9 312 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 ZFP28Q8NHY6 868 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 GFM2Q969S9 779 aaKnown RBP6.64□□□□□ -1.35
USP39-219ENST00000496047 RGMAQ96B86 450 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 SLCO4A1Q96BD0 722 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 ERLEC1Q96DZ1 483 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 RMND5BQ96G75 393 aaPredicted RBP6.64□□□□□ -1.35
USP39-219ENST00000496047 WDR92Q96MX6 357 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 ZNF583Q96ND8 569 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 RBM4BQ9BQ04 359 aaKnown RBP6.64□□□□□ -1.35
USP39-219ENST00000496047 TBCDQ9BTW9 1192 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 RBM4Q9BWF3 364 aaKnown RBP6.64□□□□□ -1.35
USP39-219ENST00000496047 CHID1Q9BWS9 393 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 ANKRD60Q9BZ19 345 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms