RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 DEFB109BQ30KR1 87 aa8.32□□□□□ -1.08
ITGB1-217ENST00000494395 MLIPQ5VWP3 458 aa8.32□□□□□ -1.08
ITGB1-217ENST00000494395 ATG9BQ674R7 924 aa8.32□□□□□ -1.08
ITGB1-217ENST00000494395 PRSS41Q7RTY9 318 aa8.32□□□□□ -1.08
ITGB1-217ENST00000494395 LRRC70Q7Z2Q7 622 aa8.32□□□□□ -1.08
ITGB1-217ENST00000494395 APLFQ8IW19 511 aaPredicted RBP8.32□□□□□ -1.08
ITGB1-217ENST00000494395 SHISA5Q8N114 240 aa8.32□□□□□ -1.08
ITGB1-217ENST00000494395 TMEM151AQ8N4L1 468 aa8.32□□□□□ -1.08
ITGB1-217ENST00000494395 AFAP1L2Q8N4X5 818 aa8.32□□□□□ -1.08
ITGB1-217ENST00000494395 METTL27Q8N6F8 245 aaPredicted RBP8.32□□□□□ -1.08
ITGB1-217ENST00000494395 KCT2Q8NC54 265 aa8.32□□□□□ -1.08
ITGB1-217ENST00000494395 NT5CQ8TCD5 201 aa8.32□□□□□ -1.08
ITGB1-217ENST00000494395 APOBEC4Q8WW27 367 aaKnown RBP8.32□□□□□ -1.08
ITGB1-217ENST00000494395 THAP4Q8WY91 577 aa8.32□□□□□ -1.08
ITGB1-217ENST00000494395 RERGQ96A58 199 aaPredicted RBP8.32□□□□□ -1.08
ITGB1-217ENST00000494395 WDR34Q96EX3 536 aa8.32□□□□□ -1.08
ITGB1-217ENST00000494395 CABS1Q96KC9 395 aa8.32□□□□□ -1.08
ITGB1-217ENST00000494395 MACROD1Q9BQ69 325 aa8.32□□□□□ -1.08
ITGB1-217ENST00000494395 CD244Q9BZW8 370 aa8.32□□□□□ -1.08
ITGB1-217ENST00000494395 DRC3Q9H069 523 aa8.32□□□□□ -1.08
ITGB1-217ENST00000494395 EHD1Q9H4M9 534 aa8.32□□□□□ -1.08
ITGB1-217ENST00000494395 CNOT10Q9H9A5 744 aaKnown RBP8.32□□□□□ -1.08
ITGB1-217ENST00000494395 ZNF304Q9HCX3 659 aa8.32□□□□□ -1.08
ITGB1-217ENST00000494395 DNAJC11Q9NVH1 559 aa8.32□□□□□ -1.08
ITGB1-217ENST00000494395 GEMIN8Q9NWZ8 242 aaKnown RBP8.32□□□□□ -1.08
ITGB1-217ENST00000494395 NDOR1Q9UHB4 597 aa8.32□□□□□ -1.08
ITGB1-217ENST00000494395 ZFP69BQ9UJL9 534 aa8.32□□□□□ -1.08
ITGB1-217ENST00000494395 TLK1Q9UKI8 766 aa8.32□□□□□ -1.08
ITGB1-217ENST00000494395 PADI2Q9Y2J8 665 aa8.32□□□□□ -1.08
ITGB1-217ENST00000494395 IKBKGQ9Y6K9 419 aa8.32□□□□□ -1.08
ITGB1-217ENST00000494395 MAU2Q9Y6X3 613 aa8.32□□□□□ -1.08
ITGB1-217ENST00000494395 ATRXP46100 2492 aa8.32□□□□□ -1.08
ITGB1-217ENST00000494395 SMG1Q96Q15 3661 aaKnown RBP8.32□□□□□ -1.08
ITGB1-217ENST00000494395 COL6A6A6NMZ7 2263 aa8.32□□□□□ -1.08
ITGB1-217ENST00000494395 DOCK10Q96BY6 2186 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 A0A0A6YYC8 382 aaPredicted RBP8.31□□□□□ -1.08
ITGB1-217ENST00000494395 LRRC14BA6NHZ5 514 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 SYCE1LA8MT33 242 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 SUPT3HB4E1H0 165 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 C4orf51C9J302 202 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 I3L1I5 382 aaPredicted RBP8.31□□□□□ -1.08
ITGB1-217ENST00000494395 OR1F1O43749 312 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 SUPT3HO75486 399 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 TBX6O95947 436 aaPredicted RBP8.31□□□□□ -1.08
ITGB1-217ENST00000494395 CD63P08962 238 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 FAM87AP0C7U9 286 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 SMIM10L1P0DMW3 83 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 PIM1P11309 404 aaPredicted RBP8.31□□□□□ -1.08
ITGB1-217ENST00000494395 GNAZP19086 355 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 GRK3P35626 688 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 CASP2P42575 452 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 GLRBP48167 497 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 POLE2P56282 527 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 PWP1Q13610 501 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 SSPNQ14714 243 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 SETDB1Q15047 1291 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 RASA2Q15283 850 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 CPZQ66K79 652 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 WDR93Q6P2C0 686 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 SH2D5Q6ZV89 423 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 TAOK1Q7L7X3 1001 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 VN1R5Q7Z5H4 357 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 PPP1R32Q7Z5V6 425 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 MRGPREQ86SM8 312 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 ASPGQ86U10 573 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 PDSS2Q86YH6 399 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 TDRPQ86YL5 185 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.31□□□□□ -1.08
ITGB1-217ENST00000494395 CAMKVQ8NCB2 501 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 CREB3L4Q8TEY5 395 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 AENQ8WTP8 325 aaKnown RBP8.31□□□□□ -1.08
ITGB1-217ENST00000494395 SLC13A3Q8WWT9 602 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 EXT2Q93063 718 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 MTBPQ96DY7 904 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 SMIM10Q96HG1 83 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 AIF1LQ9BQI0 150 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 CAPS2Q9BXY5 557 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 TRIM55Q9BYV6 548 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 TGIF2Q9GZN2 237 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 PITHD1Q9GZP4 211 aaPredicted RBP8.31□□□□□ -1.08
ITGB1-217ENST00000494395 VPS11Q9H270 941 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 ADNPQ9H2P0 1102 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 NT5DC2Q9H857 520 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 PSMC3IPQ9P2W1 217 aaPredicted RBP8.31□□□□□ -1.08
ITGB1-217ENST00000494395 GPN3Q9UHW5 284 aaPredicted RBP8.31□□□□□ -1.08
ITGB1-217ENST00000494395 TUBD1Q9UJT1 453 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 MAN2B2Q9Y2E5 1009 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 PTRH2Q9Y3E5 179 aaKnown RBP8.31□□□□□ -1.08
ITGB1-217ENST00000494395 SLC22A7Q9Y694 548 aa8.31□□□□□ -1.08
ITGB1-217ENST00000494395 TNRC6AQ8NDV7 1962 aaKnown RBP8.31□□□□□ -1.08
ITGB1-217ENST00000494395 H0YIG0 161 aa8.3□□□□□ -1.08
ITGB1-217ENST00000494395 K7EPI3 171 aa8.3□□□□□ -1.08
ITGB1-217ENST00000494395 SOCS6O14544 535 aa8.3□□□□□ -1.08
ITGB1-217ENST00000494395 PRPF4O43172 522 aaKnown RBP eCLIP8.3□□□□□ -1.08
ITGB1-217ENST00000494395 NDUFS4O43181 175 aa8.3□□□□□ -1.08
ITGB1-217ENST00000494395 CCNT2O60583 730 aaKnown RBP8.3□□□□□ -1.08
ITGB1-217ENST00000494395 CEACAM4O75871 244 aa8.3□□□□□ -1.08
ITGB1-217ENST00000494395 WFS1O76024 890 aa8.3□□□□□ -1.08
ITGB1-217ENST00000494395 S100BP04271 92 aaPredicted RBP8.3□□□□□ -1.08
ITGB1-217ENST00000494395 PRB1P04280 392 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms