RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 ZNF404Q494X3 552 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 GTDC1Q4AE62 458 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 GCNT6Q5T4J0 391 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 ERAP2Q6P179 960 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 TAS1R1Q7RTX1 841 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 ZNF605Q86T29 641 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 CYP4Z1Q86W10 505 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 TMEM173Q86WV6 379 aaPredicted RBP11.06□□□□□ -0.64
RFC4-214ENST00000494047 PTOV1Q86YD1 416 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 ARMC8Q8IUR7 673 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 ADGRG2Q8IZP9 1017 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 APCDD1Q8J025 514 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 C1orf52Q8N6N3 182 aaKnown RBP11.06□□□□□ -0.64
RFC4-214ENST00000494047 ARL14EPQ8N8R7 260 aaPredicted RBP11.06□□□□□ -0.64
RFC4-214ENST00000494047 CLHC1Q8NHS4 586 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 RHOXF1Q8NHV9 184 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 CNIH3Q8TBE1 160 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 ADAMTS19Q8TE59 1207 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 ZFP90Q8TF47 636 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 BCL7CQ8WUZ0 217 aaPredicted RBP11.06□□□□□ -0.64
RFC4-214ENST00000494047 LGALS12Q96DT0 336 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 APIPQ96GX9 242 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 HEPHQ9BQS7 1158 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 INPP5KQ9BT40 448 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 COPS4Q9BT78 406 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 CHST8Q9H2A9 424 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 REEP4Q9H6H4 257 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 IL21Q9HBE4 155 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 MYNNQ9NPC7 610 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 CCDC177Q9NQR7 707 aaPredicted RBP11.06□□□□□ -0.64
RFC4-214ENST00000494047 FKBP14Q9NWM8 211 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 IMPAD1Q9NX62 359 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 HCSTQ9UBK5 93 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 FAM8A1Q9UBU6 413 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 SEC14L4Q9UDX3 406 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 FZD4Q9ULV1 537 aa11.06□□□□□ -0.64
RFC4-214ENST00000494047 FAM32AQ9Y421 112 aaKnown RBP11.06□□□□□ -0.64
RFC4-214ENST00000494047 MAGED1Q9Y5V3 778 aaPredicted RBP11.06□□□□□ -0.64
RFC4-214ENST00000494047 IRGMA1A4Y4 181 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 UPK3BL1B0FP48 263 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 UPK3BL2E5RIL1 263 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 LOC110117498-PIK3R3F6TDL0 507 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 TNFRSF11BO00300 401 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 SLC9A3R1O14745 358 aaPredicted RBP11.05□□□□□ -0.64
RFC4-214ENST00000494047 TBX19O60806 448 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 OXSR1O95747 527 aaPredicted RBP11.05□□□□□ -0.64
RFC4-214ENST00000494047 MT-ND2P03891 347 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 CDK1P06493 297 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 ANXA4P09525 319 aaPredicted RBP11.05□□□□□ -0.64
RFC4-214ENST00000494047 C1SP09871 688 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 CTSAP10619 480 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 CD36P16671 472 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 AGXTP21549 392 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 XPAP23025 273 aaPredicted RBP11.05□□□□□ -0.64
RFC4-214ENST00000494047 GABRR2P28476 465 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 HSD17B2P37059 387 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 IST1P53990 364 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 WNT3P56703 355 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 RPP38P78345 283 aaKnown RBP11.05□□□□□ -0.64
RFC4-214ENST00000494047 VLDLRP98155 873 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 B4GALNT1Q00973 533 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 PDE7AQ13946 482 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 INAQ16352 499 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 DUSP6Q16828 381 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 ARHGAP15Q53QZ3 475 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 CRB2Q5IJ48 1285 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 LAIR2Q6ISS4 152 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 PTCRAQ6ISU1 281 aaPredicted RBP11.05□□□□□ -0.64
RFC4-214ENST00000494047 AGTRAPQ6RW13 159 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 TMEM184AQ6ZMB5 413 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 DPPA4Q7L190 304 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 ZNF765Q7L2R6 523 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 TMEM179BQ7Z7N9 219 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 TMEM150AQ86TG1 271 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 TRIM74Q86UV6 250 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 TRIM73Q86UV7 250 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 SLC22A15Q8IZD6 547 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 MRPL43Q8N983 215 aaKnown RBP11.05□□□□□ -0.64
RFC4-214ENST00000494047 IL17RCQ8NAC3 791 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 MCFD2Q8NI22 146 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 WFIKKN2Q8TEU8 576 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 FRS2Q8WU20 508 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 SNRNP27Q8WVK2 155 aaKnown RBP11.05□□□□□ -0.64
RFC4-214ENST00000494047 PIK3R3Q92569 461 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 NR4A3Q92570 626 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 C7orf34Q96L11 122 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 RPL10LQ96L21 214 aaKnown RBP11.05□□□□□ -0.64
RFC4-214ENST00000494047 QRFPRQ96P65 431 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 SMIM14Q96QK8 99 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 CSF3RQ99062 836 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 CCM2Q9BSQ5 444 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 IGFLR1Q9H665 355 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 ZDHHC6Q9H6R6 413 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 SGK2Q9HBY8 427 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 MOV10Q9HCE1 1003 aaKnown RBP11.05□□□□□ -0.64
RFC4-214ENST00000494047 NEUROD4Q9HD90 331 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 ZSCAN32Q9NX65 697 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 CFAP97Q9P2B7 532 aa11.05□□□□□ -0.64
RFC4-214ENST00000494047 CRNNQ9UBG3 495 aaPredicted RBP11.05□□□□□ -0.64
RFC4-214ENST00000494047 B4GALT6Q9UBX8 382 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms