RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 CLOCKO15516 846 aa10.19□□□□□ -0.78
CLCN6-208ENST00000494028 DEAF1O75398 565 aaPredicted RBP10.19□□□□□ -0.78
CLCN6-208ENST00000494028 GMNNO75496 209 aa10.19□□□□□ -0.78
CLCN6-208ENST00000494028 PRKD3O94806 890 aa10.19□□□□□ -0.78
CLCN6-208ENST00000494028 EML2O95834 649 aa10.19□□□□□ -0.78
CLCN6-208ENST00000494028 SERPINA1P01009 418 aa10.19□□□□□ -0.78
CLCN6-208ENST00000494028 SEMG1P04279 462 aa10.19□□□□□ -0.78
CLCN6-208ENST00000494028 PPIBP23284 216 aaKnown RBP10.19□□□□□ -0.78
CLCN6-208ENST00000494028 CXCR2P25025 360 aa10.19□□□□□ -0.78
CLCN6-208ENST00000494028 PCGF2P35227 344 aa10.19□□□□□ -0.78
CLCN6-208ENST00000494028 BSGP35613 385 aa10.19□□□□□ -0.78
CLCN6-208ENST00000494028 TPMTP51580 245 aa10.19□□□□□ -0.78
CLCN6-208ENST00000494028 CLCN2P51788 898 aa10.19□□□□□ -0.78
CLCN6-208ENST00000494028 TAS2R50P59544 299 aa10.19□□□□□ -0.78
CLCN6-208ENST00000494028 MC1RQ01726 317 aa10.19□□□□□ -0.78
CLCN6-208ENST00000494028 CHRNB3Q05901 458 aa10.19□□□□□ -0.78
CLCN6-208ENST00000494028 LRRC74AQ0VAA2 488 aa10.19□□□□□ -0.78
CLCN6-208ENST00000494028 SFSWAPQ12872 951 aaKnown RBP10.19□□□□□ -0.78
CLCN6-208ENST00000494028 APOFQ13790 326 aa10.19□□□□□ -0.78
CLCN6-208ENST00000494028 VMACQ2NL98 169 aa10.19□□□□□ -0.78
CLCN6-208ENST00000494028 LRRC23Q53EV4 343 aaPredicted RBP10.19□□□□□ -0.78
CLCN6-208ENST00000494028 NHSL2Q5HYW2 709 aa10.19□□□□□ -0.78
CLCN6-208ENST00000494028 ERICH5Q6P6B1 374 aa10.19□□□□□ -0.78
CLCN6-208ENST00000494028 R3HCC1LQ7Z5L2 792 aaKnown RBP10.19□□□□□ -0.78
CLCN6-208ENST00000494028 ADGRF3Q8IZF5 1079 aa10.19□□□□□ -0.78
CLCN6-208ENST00000494028 ST13P4Q8IZP2 240 aaPredicted RBP10.19□□□□□ -0.78
CLCN6-208ENST00000494028 FBXL6Q8N531 539 aa10.19□□□□□ -0.78
CLCN6-208ENST00000494028 OR2A1Q8NGT9 310 aa10.19□□□□□ -0.78
CLCN6-208ENST00000494028 GOT1L1Q8NHS2 421 aaPredicted RBP10.19□□□□□ -0.78
CLCN6-208ENST00000494028 PNPT1Q8TCS8 783 aaKnown RBP10.19□□□□□ -0.78
CLCN6-208ENST00000494028 CIDECQ96AQ7 238 aaPredicted RBP10.19□□□□□ -0.78
CLCN6-208ENST00000494028 MTERF3Q96E29 417 aa10.19□□□□□ -0.78
CLCN6-208ENST00000494028 VPS50Q96JG6 964 aa10.19□□□□□ -0.78
CLCN6-208ENST00000494028 CDX2Q99626 313 aaPredicted RBP10.19□□□□□ -0.78
CLCN6-208ENST00000494028 ADI1Q9BV57 179 aa10.19□□□□□ -0.78
CLCN6-208ENST00000494028 UGT2B28Q9BY64 529 aa10.19□□□□□ -0.78
CLCN6-208ENST00000494028 AICDAQ9GZX7 198 aa10.19□□□□□ -0.78
CLCN6-208ENST00000494028 KIR3DX1Q9H7L2 352 aa10.19□□□□□ -0.78
CLCN6-208ENST00000494028 NTN4Q9HB63 628 aa10.19□□□□□ -0.78
CLCN6-208ENST00000494028 LHX9Q9NQ69 397 aa10.19□□□□□ -0.78
CLCN6-208ENST00000494028 PRDM8Q9NQV8 689 aa10.19□□□□□ -0.78
CLCN6-208ENST00000494028 PNMA8BQ9ULN7 279 aaPredicted RBP10.19□□□□□ -0.78
CLCN6-208ENST00000494028 VPS4AQ9UN37 437 aa10.19□□□□□ -0.78
CLCN6-208ENST00000494028 NUP214P35658 2090 aaPredicted RBP10.19□□□□□ -0.78
CLCN6-208ENST00000494028 MYOCOSA0A1B0GUC4 107 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 LRRC72A6NJI9 287 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 C4orf51C9J302 202 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 RTCAO00442 366 aaKnown RBP10.18□□□□□ -0.78
CLCN6-208ENST00000494028 HAT1O14929 419 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 TBX19O60806 448 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 GPR37L1O60883 481 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 APBB3O95704 486 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 C6orf47O95873 294 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 IGLV3-19P01714 112 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 KLK1P06870 262 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 GLULP15104 373 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 ZNF23P17027 643 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 IGFBP4P22692 258 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 PTX3P26022 381 aaPredicted RBP10.18□□□□□ -0.78
CLCN6-208ENST00000494028 AK4P27144 223 aaPredicted RBP10.18□□□□□ -0.78
CLCN6-208ENST00000494028 BCL6P41182 706 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 MAGEA2P43356 314 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 MVDP53602 400 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 C2orf80Q0P641 193 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 ALG11Q2TAA5 492 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 DEPDC1Q5TB30 811 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 TMEM214Q6NUQ4 689 aaKnown RBP10.18□□□□□ -0.78
CLCN6-208ENST00000494028 ENPP7Q6UWV6 458 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 ISLR2Q6UXK2 745 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 ZNF852Q6ZMS4 543 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 ZNF621Q6ZSS3 439 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 NUDT13Q86X67 352 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 PLD3Q8IV08 490 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 APLFQ8IW19 511 aaPredicted RBP10.18□□□□□ -0.78
CLCN6-208ENST00000494028 EID3Q8N140 333 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 CLEC4FQ8N1N0 589 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 PGBD3Q8N328 593 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 SYNPOQ8N3V7 929 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 TMEM145Q8NBT3 493 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 NETO1Q8TDF5 533 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 CREB3L4Q8TEY5 395 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 HMGB4Q8WW32 186 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 JPH3Q8WXH2 748 aaPredicted RBP10.18□□□□□ -0.78
CLCN6-208ENST00000494028 FAM3CQ92520 227 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 TMBIM1Q969X1 311 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 ZNF764Q96H86 408 aaPredicted RBP10.18□□□□□ -0.78
CLCN6-208ENST00000494028 BMFQ96LC9 184 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 F2RL3Q96RI0 385 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 PRPF18Q99633 342 aaKnown RBP10.18□□□□□ -0.78
CLCN6-208ENST00000494028 DPH2Q9BQC3 489 aaPredicted RBP10.18□□□□□ -0.78
CLCN6-208ENST00000494028 TWSG1Q9GZX9 223 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 UBE2ZQ9H832 354 aaPredicted RBP10.18□□□□□ -0.78
CLCN6-208ENST00000494028 YY1AP1Q9H869 796 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 TPT1P8Q9HAU6 139 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 ATAD3AQ9NVI7 634 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 SPHK1Q9NYA1 384 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 SH3BP4Q9P0V3 963 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 TAAR2Q9P1P5 351 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 TBC1D29Q9UFV1 150 aa10.18□□□□□ -0.78
CLCN6-208ENST00000494028 ACSL6Q9UKU0 697 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms