RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 SMARCD2Q92925 531 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 GRAMD2BQ96HH9 432 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 PIWIL1Q96J94 861 aaKnown RBP2.9□□□□□ -1.95
PTCD3-218ENST00000493430 ART5Q96L15 291 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 LINC00479Q96M42 142 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 AK8Q96MA6 479 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 ATOH8Q96SQ7 321 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 EGFL8Q99944 293 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 HERPUD2Q9BSE4 406 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 MED10Q9BTT4 135 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 PPCSQ9HAB8 311 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 LMAN1LQ9HAT1 526 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 ZFP14Q9HCL3 533 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 ZDHHC18Q9NUE0 388 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 GCNT4Q9P109 453 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 LARSQ9P2J5 1176 aaKnown RBP2.9□□□□□ -1.95
PTCD3-218ENST00000493430 CHORDC1Q9UHD1 332 aaPredicted RBP2.9□□□□□ -1.95
PTCD3-218ENST00000493430 A4GNTQ9UNA3 340 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 KLHL20Q9Y2M5 609 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 STYXL1Q9Y6J8 313 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 TPRP12270 2363 aaKnown RBP2.9□□□□□ -1.95
PTCD3-218ENST00000493430 TEX13CA0A0J9YWL9 993 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 WASH3PC4AMC7 463 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 SGK1O00141 431 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 PLK4O00444 970 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 ZNF263O14978 683 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 CASC3O15234 703 aaKnown RBP2.89□□□□□ -1.95
PTCD3-218ENST00000493430 EIF3DO15371 548 aaKnown RBP eCLIP2.89□□□□□ -1.95
PTCD3-218ENST00000493430 ARHGEF9O43307 516 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 COCHO43405 550 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 ECI2O75521 394 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 NOL4O94818 638 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 YEATS4O95619 227 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 MBL2P11226 248 aaPredicted RBP2.89□□□□□ -1.95
PTCD3-218ENST00000493430 HLA-EP13747 358 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 GAP43P17677 238 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 PSMC3P17980 439 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 TYMPP19971 482 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 MUTP22033 750 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 NR2F2P24468 414 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 RPL9P32969 192 aaKnown RBP2.89□□□□□ -1.95
PTCD3-218ENST00000493430 PSMC2P35998 433 aaKnown RBP2.89□□□□□ -1.95
PTCD3-218ENST00000493430 PRCPP42785 496 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 SYKP43405 635 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 CLK1P49759 484 aaKnown RBP2.89□□□□□ -1.95
PTCD3-218ENST00000493430 RGS7P49802 495 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 NDST1P52848 882 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 MAP3K7CLP57077 242 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 STARD6P59095 220 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 UFM1P61960 85 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 NOP14P78316 857 aaKnown RBP2.89□□□□□ -1.95
PTCD3-218ENST00000493430 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.89□□□□□ -1.95
PTCD3-218ENST00000493430 ELAVL2Q12926 359 aaKnown RBP2.89□□□□□ -1.95
PTCD3-218ENST00000493430 ITGA9Q13797 1035 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 MTF1Q14872 753 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 PSMD6Q15008 389 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 PCM1Q15154 2024 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 CAMK4Q16566 473 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 DECR1Q16698 335 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 ZNF699Q32M78 642 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 ZCWPW2Q504Y3 356 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 RAB6CQ53S08 254 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 C2CD6Q53TS8 623 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 SDK2Q58EX2 2172 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 DCST1Q5T197 706 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 CYP4A22Q5TCH4 519 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 HIST2H2BDQ6DRA6 164 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 RAD9BQ6WBX8 426 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 PQLC2Q6ZP29 291 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 CCDC73Q6ZRK6 1079 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 QSOX2Q6ZRP7 698 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 TPGS1Q6ZTW0 290 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 SH2D6Q7Z4S9 175 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 SCD5Q86SK9 330 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 PHLDB2Q86SQ0 1253 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 DNAAF5Q86Y56 855 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 MAP7D3Q8IWC1 876 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 CCDC65Q8IXS2 484 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 ZC3H3Q8IXZ2 948 aaKnown RBP2.89□□□□□ -1.95
PTCD3-218ENST00000493430 CMTM8Q8IZV2 173 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 SPAG16Q8N0X2 631 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 ALLCQ8N6M5 410 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 APPL2Q8NEU8 664 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 RPLP0P6Q8NHW5 317 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 UBA3Q8TBC4 463 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 ZCCHC10Q8TBK6 192 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 SLC2A14Q8TDB8 520 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 FCAMRQ8WWV6 532 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 FAM3CQ92520 227 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 TAAR8Q969N4 342 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 SNX21Q969T3 373 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 PSMG2Q969U7 264 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 ELSPBP1Q96BH3 223 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 RHBDF1Q96CC6 855 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 ARHGEF26Q96DR7 871 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 ZNF560Q96MR9 790 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 ZNF396Q96N95 335 aaPredicted RBP2.89□□□□□ -1.95
PTCD3-218ENST00000493430 OPRPNQ99935 248 aaPredicted RBP2.89□□□□□ -1.95
PTCD3-218ENST00000493430 RAB6CQ9H0N0 254 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 WDR13Q9H1Z4 485 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms