RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 C4orf33Q8N1A6 199 aa12.12□□□□□ -0.47
CLIP2-209ENST00000493166 TMEM151AQ8N4L1 468 aa12.12□□□□□ -0.47
CLIP2-209ENST00000493166 AFAP1L2Q8N4X5 818 aa12.12□□□□□ -0.47
CLIP2-209ENST00000493166 UTP15Q8TED0 518 aaKnown RBP12.12□□□□□ -0.47
CLIP2-209ENST00000493166 APOBEC4Q8WW27 367 aaKnown RBP12.12□□□□□ -0.47
CLIP2-209ENST00000493166 ATP6V1E2Q96A05 226 aa12.12□□□□□ -0.47
CLIP2-209ENST00000493166 RHBGQ9H310 441 aa12.12□□□□□ -0.47
CLIP2-209ENST00000493166 C14orf105Q9NVL8 296 aa12.12□□□□□ -0.47
CLIP2-209ENST00000493166 HCN3Q9P1Z3 774 aa12.12□□□□□ -0.47
CLIP2-209ENST00000493166 LGALS13Q9UHV8 139 aa12.12□□□□□ -0.47
CLIP2-209ENST00000493166 PCTPQ9UKL6 214 aa12.12□□□□□ -0.47
CLIP2-209ENST00000493166 ZNF490Q9ULM2 529 aaPredicted RBP12.12□□□□□ -0.47
CLIP2-209ENST00000493166 NAALAD2Q9Y3Q0 740 aa12.12□□□□□ -0.47
CLIP2-209ENST00000493166 TNRC6AQ8NDV7 1962 aaKnown RBP12.12□□□□□ -0.47
CLIP2-209ENST00000493166 ATRXP46100 2492 aa12.11□□□□□ -0.47
CLIP2-209ENST00000493166 IGLV3-12A0A075B6K2 115 aa12.11□□□□□ -0.47
CLIP2-209ENST00000493166 ZNF860A6NHJ4 632 aa12.11□□□□□ -0.47
CLIP2-209ENST00000493166 OR7A17O14581 309 aa12.11□□□□□ -0.47
CLIP2-209ENST00000493166 UGDHO60701 494 aa12.11□□□□□ -0.47
CLIP2-209ENST00000493166 GALR3O60755 368 aaPredicted RBP12.11□□□□□ -0.47
CLIP2-209ENST00000493166 ERLIN1O75477 346 aa12.11□□□□□ -0.47
CLIP2-209ENST00000493166 UMODP07911 640 aa12.11□□□□□ -0.47
CLIP2-209ENST00000493166 RPS17P08708 135 aaKnown RBP12.11□□□□□ -0.47
CLIP2-209ENST00000493166 ATP5F1P24539 256 aaPredicted RBP12.11□□□□□ -0.47
CLIP2-209ENST00000493166 CRHR1P34998 444 aa12.11□□□□□ -0.47
CLIP2-209ENST00000493166 RAB8AP61006 207 aa12.11□□□□□ -0.47
CLIP2-209ENST00000493166 HERVK_113P63132 956 aa12.11□□□□□ -0.47
CLIP2-209ENST00000493166 KLC1Q07866 573 aa12.11□□□□□ -0.47
CLIP2-209ENST00000493166 RBBP7Q16576 425 aa12.11□□□□□ -0.47
CLIP2-209ENST00000493166 LINC00303Q3SY05 128 aa12.11□□□□□ -0.47
CLIP2-209ENST00000493166 KRT71Q3SY84 523 aa12.11□□□□□ -0.47
CLIP2-209ENST00000493166 CCDC153Q494R4 210 aa12.11□□□□□ -0.47
CLIP2-209ENST00000493166 DEFB134Q4QY38 66 aa12.11□□□□□ -0.47
CLIP2-209ENST00000493166 VWA2Q5GFL6 755 aa12.11□□□□□ -0.47
CLIP2-209ENST00000493166 ADNP2Q6IQ32 1131 aa12.11□□□□□ -0.47
CLIP2-209ENST00000493166 SH2D5Q6ZV89 423 aa12.11□□□□□ -0.47
CLIP2-209ENST00000493166 VN1R5Q7Z5H4 357 aa12.11□□□□□ -0.47
CLIP2-209ENST00000493166 MRGPREQ86SM8 312 aa12.11□□□□□ -0.47
CLIP2-209ENST00000493166 PDSS2Q86YH6 399 aa12.11□□□□□ -0.47
CLIP2-209ENST00000493166 TMEM151BQ8IW70 566 aa12.11□□□□□ -0.47
CLIP2-209ENST00000493166 LAS2Q8IYD9 372 aa12.11□□□□□ -0.47
CLIP2-209ENST00000493166 PPP4R1Q8TF05 950 aa12.11□□□□□ -0.47
CLIP2-209ENST00000493166 GAL3ST3Q96A11 431 aa12.11□□□□□ -0.47
CLIP2-209ENST00000493166 NSUN5Q96P11 429 aaKnown RBP12.11□□□□□ -0.47
CLIP2-209ENST00000493166 IP6K3Q96PC2 410 aa12.11□□□□□ -0.47
CLIP2-209ENST00000493166 CRB3Q9BUF7 120 aa12.11□□□□□ -0.47
CLIP2-209ENST00000493166 TMEM109Q9BVC6 243 aa12.11□□□□□ -0.47
CLIP2-209ENST00000493166 ERVK-6Q9BXR3 956 aa12.11□□□□□ -0.47
CLIP2-209ENST00000493166 KLHL31Q9H511 634 aa12.11□□□□□ -0.47
CLIP2-209ENST00000493166 NOL11Q9H8H0 719 aaKnown RBP12.11□□□□□ -0.47
CLIP2-209ENST00000493166 EMCNQ9ULC0 261 aa12.11□□□□□ -0.47
CLIP2-209ENST00000493166 GRID1Q9ULK0 1009 aa12.11□□□□□ -0.47
CLIP2-209ENST00000493166 KCNMB2Q9Y691 235 aa12.11□□□□□ -0.47
CLIP2-209ENST00000493166 DOCK10Q96BY6 2186 aa12.11□□□□□ -0.47
CLIP2-209ENST00000493166 LRIT2A6NDA9 550 aa12.1□□□□□ -0.47
CLIP2-209ENST00000493166 ARGFXA6NJG6 315 aa12.1□□□□□ -0.47
CLIP2-209ENST00000493166 PEX12O00623 359 aa12.1□□□□□ -0.47
CLIP2-209ENST00000493166 ATXN7O15265 892 aaPredicted RBP12.1□□□□□ -0.47
CLIP2-209ENST00000493166 ERI3O43414 337 aaKnown RBP12.1□□□□□ -0.47
CLIP2-209ENST00000493166 DLX3O60479 287 aa12.1□□□□□ -0.47
CLIP2-209ENST00000493166 CLDN9O95484 217 aa12.1□□□□□ -0.47
CLIP2-209ENST00000493166 B3GALT4O96024 378 aa12.1□□□□□ -0.47
CLIP2-209ENST00000493166 IGHEP01854 428 aa12.1□□□□□ -0.47
CLIP2-209ENST00000493166 FAM87AP0C7U9 286 aa12.1□□□□□ -0.47
CLIP2-209ENST00000493166 MYL2P10916 166 aa12.1□□□□□ -0.47
CLIP2-209ENST00000493166 MMP11P24347 488 aa12.1□□□□□ -0.47
CLIP2-209ENST00000493166 SERPINB1P30740 379 aa12.1□□□□□ -0.47
CLIP2-209ENST00000493166 HNRNPH1P31943 449 aaKnown RBP12.1□□□□□ -0.47
CLIP2-209ENST00000493166 POLE2P56282 527 aa12.1□□□□□ -0.47
CLIP2-209ENST00000493166 SLC18A2Q05940 514 aa12.1□□□□□ -0.47
CLIP2-209ENST00000493166 ZNF844Q08AG5 666 aa12.1□□□□□ -0.47
CLIP2-209ENST00000493166 ATP1A4Q13733 1029 aa12.1□□□□□ -0.47
CLIP2-209ENST00000493166 DDX39BQ13838 428 aaKnown RBP12.1□□□□□ -0.47
CLIP2-209ENST00000493166 CPSF6Q16630 551 aaKnown RBP eCLIP12.1□□□□□ -0.47
CLIP2-209ENST00000493166 MFSD4BQ5TF39 518 aa12.1□□□□□ -0.47
CLIP2-209ENST00000493166 TRIM40Q6P9F5 258 aa12.1□□□□□ -0.47
CLIP2-209ENST00000493166 RPS27LQ71UM5 84 aaKnown RBP12.1□□□□□ -0.47
CLIP2-209ENST00000493166 PPP1R32Q7Z5V6 425 aa12.1□□□□□ -0.47
CLIP2-209ENST00000493166 TRABD2AQ86V40 505 aa12.1□□□□□ -0.47
CLIP2-209ENST00000493166 SLC22A9Q8IVM8 553 aa12.1□□□□□ -0.47
CLIP2-209ENST00000493166 ZC3H7AQ8IWR0 971 aaKnown RBP12.1□□□□□ -0.47
CLIP2-209ENST00000493166 SRRM1Q8IYB3 904 aaKnown RBP12.1□□□□□ -0.47
CLIP2-209ENST00000493166 CCDC63Q8NA47 563 aa12.1□□□□□ -0.47
CLIP2-209ENST00000493166 OR7G3Q8NG95 312 aa12.1□□□□□ -0.47
CLIP2-209ENST00000493166 OR52B6Q8NGF0 335 aa12.1□□□□□ -0.47
CLIP2-209ENST00000493166 OR51Q1Q8NH59 317 aa12.1□□□□□ -0.47
CLIP2-209ENST00000493166 ZNF483Q8TF39 744 aaPredicted RBP12.1□□□□□ -0.47
CLIP2-209ENST00000493166 REPS1Q96D71 796 aa12.1□□□□□ -0.47
CLIP2-209ENST00000493166 MS4A6EQ96DS6 147 aa12.1□□□□□ -0.47
CLIP2-209ENST00000493166 CCDC126Q96EE4 140 aa12.1□□□□□ -0.47
CLIP2-209ENST00000493166 WBP1Q96G27 269 aa12.1□□□□□ -0.47
CLIP2-209ENST00000493166 APOPT1Q96IL0 206 aa12.1□□□□□ -0.47
CLIP2-209ENST00000493166 FAR2Q96K12 515 aa12.1□□□□□ -0.47
CLIP2-209ENST00000493166 TMEM237Q96Q45 408 aa12.1□□□□□ -0.47
CLIP2-209ENST00000493166 C1QTNF3Q9BXJ4 246 aa12.1□□□□□ -0.47
CLIP2-209ENST00000493166 TGIF2Q9GZN2 237 aa12.1□□□□□ -0.47
CLIP2-209ENST00000493166 REXO4Q9GZR2 422 aaKnown RBP12.1□□□□□ -0.47
CLIP2-209ENST00000493166 AICDAQ9GZX7 198 aa12.1□□□□□ -0.47
CLIP2-209ENST00000493166 IQCGQ9H095 443 aaKnown RBP12.1□□□□□ -0.47
CLIP2-209ENST00000493166 SEMA4BQ9NPR2 832 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms