RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 NIPAL1Q6NVV3 410 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 SHISA6Q6ZSJ9 500 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 RPS27LQ71UM5 84 aaKnown RBP13.25□□□□□ -0.29
CCM2-217ENST00000492883 PRSS41Q7RTY9 318 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 VN1R5Q7Z5H4 357 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 PRSS58Q8IYP2 241 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 CCNYL1Q8N7R7 359 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 AMER3Q8N944 861 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 L3MBTL4Q8NA19 623 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 OR52B6Q8NGF0 335 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 RDH11Q8TC12 318 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 STT3BQ8TCJ2 826 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 TRPC4APQ8TEL6 797 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 ZNF483Q8TF39 744 aaPredicted RBP13.25□□□□□ -0.29
CCM2-217ENST00000492883 THAP4Q8WY91 577 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 REPS1Q96D71 796 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 APOPT1Q96IL0 206 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 FAR2Q96K12 515 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 NTMT1Q9BV86 223 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 C1QTNF3Q9BXJ4 246 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 REXO4Q9GZR2 422 aaKnown RBP13.25□□□□□ -0.29
CCM2-217ENST00000492883 SLC26A1Q9H2B4 701 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 SOX17Q9H6I2 414 aaPredicted RBP13.25□□□□□ -0.29
CCM2-217ENST00000492883 ZBTB26Q9HCK0 441 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 MKKSQ9NPJ1 570 aaPredicted RBP13.25□□□□□ -0.29
CCM2-217ENST00000492883 ACSS2Q9NR19 701 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 SENP1Q9P0U3 644 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 HCN3Q9P1Z3 774 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 ADGRE2Q9UHX3 823 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 MID2Q9UJV3 735 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 POLHQ9Y253 713 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 PLLPQ9Y342 182 aa13.25□□□□□ -0.29
CCM2-217ENST00000492883 ZNF860A6NHJ4 632 aa13.24□□□□□ -0.29
CCM2-217ENST00000492883 VSTM2BA6NLU5 285 aa13.24□□□□□ -0.29
CCM2-217ENST00000492883 ERI3O43414 337 aaKnown RBP13.24□□□□□ -0.29
CCM2-217ENST00000492883 GALR3O60755 368 aaPredicted RBP13.24□□□□□ -0.29
CCM2-217ENST00000492883 RDH16O75452 317 aa13.24□□□□□ -0.29
CCM2-217ENST00000492883 B3GALT4O96024 378 aa13.24□□□□□ -0.29
CCM2-217ENST00000492883 TGFB1P01137 390 aa13.24□□□□□ -0.29
CCM2-217ENST00000492883 FURINP09958 794 aa13.24□□□□□ -0.29
CCM2-217ENST00000492883 ZGLP1P0C6A0 271 aa13.24□□□□□ -0.29
CCM2-217ENST00000492883 MYZAPP0CAP1 466 aa13.24□□□□□ -0.29
CCM2-217ENST00000492883 SERPINB1P30740 379 aa13.24□□□□□ -0.29
CCM2-217ENST00000492883 PLA2G16P53816 162 aa13.24□□□□□ -0.29
CCM2-217ENST00000492883 PHEXP78562 749 aa13.24□□□□□ -0.29
CCM2-217ENST00000492883 TGM3Q08188 693 aa13.24□□□□□ -0.29
CCM2-217ENST00000492883 DDX39BQ13838 428 aaKnown RBP13.24□□□□□ -0.29
CCM2-217ENST00000492883 ZRSR2Q15696 482 aaKnown RBP13.24□□□□□ -0.29
CCM2-217ENST00000492883 CHSY3Q70JA7 882 aa13.24□□□□□ -0.29
CCM2-217ENST00000492883 PDSS2Q86YH6 399 aa13.24□□□□□ -0.29
CCM2-217ENST00000492883 RAB43Q86YS6 212 aa13.24□□□□□ -0.29
CCM2-217ENST00000492883 AFAP1L2Q8N4X5 818 aa13.24□□□□□ -0.29
CCM2-217ENST00000492883 ARMC2Q8NEN0 867 aa13.24□□□□□ -0.29
CCM2-217ENST00000492883 OR4F6Q8NGB9 312 aa13.24□□□□□ -0.29
CCM2-217ENST00000492883 OR51Q1Q8NH59 317 aa13.24□□□□□ -0.29
CCM2-217ENST00000492883 ZNF473Q8WTR7 871 aaKnown RBP13.24□□□□□ -0.29
CCM2-217ENST00000492883 GAL3ST3Q96A11 431 aa13.24□□□□□ -0.29
CCM2-217ENST00000492883 MS4A6EQ96DS6 147 aa13.24□□□□□ -0.29
CCM2-217ENST00000492883 MAGEB10Q96LZ2 347 aaPredicted RBP13.24□□□□□ -0.29
CCM2-217ENST00000492883 TMEM237Q96Q45 408 aa13.24□□□□□ -0.29
CCM2-217ENST00000492883 F2RL3Q96RI0 385 aa13.24□□□□□ -0.29
CCM2-217ENST00000492883 SPSB2Q99619 263 aa13.24□□□□□ -0.29
CCM2-217ENST00000492883 ARHGAP9Q9BRR9 750 aa13.24□□□□□ -0.29
CCM2-217ENST00000492883 MKS1Q9NXB0 559 aa13.24□□□□□ -0.29
CCM2-217ENST00000492883 CEP295Q9C0D2 2601 aa13.24□□□□□ -0.29
CCM2-217ENST00000492883 FRYQ5TBA9 3013 aa13.23□□□□□ -0.29
CCM2-217ENST00000492883 IGLV3-12A0A075B6K2 115 aa13.23□□□□□ -0.29
CCM2-217ENST00000492883 A0A088AWK7 358 aa13.23□□□□□ -0.29
CCM2-217ENST00000492883 A0A0G2JN53 185 aa13.23□□□□□ -0.29
CCM2-217ENST00000492883 H0YIV9 168 aa13.23□□□□□ -0.29
CCM2-217ENST00000492883 PEX12O00623 359 aa13.23□□□□□ -0.29
CCM2-217ENST00000492883 PPP6CO00743 305 aa13.23□□□□□ -0.29
CCM2-217ENST00000492883 CTIFO43310 598 aaKnown RBP13.23□□□□□ -0.29
CCM2-217ENST00000492883 SH3BGRLO75368 114 aa13.23□□□□□ -0.29
CCM2-217ENST00000492883 MLYCDO95822 493 aa13.23□□□□□ -0.29
CCM2-217ENST00000492883 ITGB2P05107 769 aa13.23□□□□□ -0.29
CCM2-217ENST00000492883 SMIM10L1P0DMW3 83 aa13.23□□□□□ -0.29
CCM2-217ENST00000492883 CREB1P16220 341 aa13.23□□□□□ -0.29
CCM2-217ENST00000492883 ZNF10P21506 573 aaPredicted RBP13.23□□□□□ -0.29
CCM2-217ENST00000492883 HNRNPH1P31943 449 aaKnown RBP13.23□□□□□ -0.29
CCM2-217ENST00000492883 PIK3CBP42338 1070 aa13.23□□□□□ -0.29
CCM2-217ENST00000492883 XCR1P46094 333 aa13.23□□□□□ -0.29
CCM2-217ENST00000492883 BTN3A2P78410 334 aa13.23□□□□□ -0.29
CCM2-217ENST00000492883 KLC1Q07866 573 aa13.23□□□□□ -0.29
CCM2-217ENST00000492883 TBR1Q16650 682 aa13.23□□□□□ -0.29
CCM2-217ENST00000492883 CFAP157Q5JU67 520 aa13.23□□□□□ -0.29
CCM2-217ENST00000492883 MFSD4BQ5TF39 518 aa13.23□□□□□ -0.29
CCM2-217ENST00000492883 TRIM40Q6P9F5 258 aa13.23□□□□□ -0.29
CCM2-217ENST00000492883 BORAQ6PGQ7 559 aa13.23□□□□□ -0.29
CCM2-217ENST00000492883 OR2L5Q8NG80 312 aa13.23□□□□□ -0.29
CCM2-217ENST00000492883 HUS1BQ8NHY5 278 aa13.23□□□□□ -0.29
CCM2-217ENST00000492883 TCP10LQ8TDR4 215 aa13.23□□□□□ -0.29
CCM2-217ENST00000492883 EXTL1Q92935 676 aa13.23□□□□□ -0.29
CCM2-217ENST00000492883 MTFMTQ96DP5 389 aaKnown RBP13.23□□□□□ -0.29
CCM2-217ENST00000492883 L3HYPDHQ96EM0 354 aa13.23□□□□□ -0.29
CCM2-217ENST00000492883 CMTM7Q96FZ5 175 aa13.23□□□□□ -0.29
CCM2-217ENST00000492883 SMIM10Q96HG1 83 aa13.23□□□□□ -0.29
CCM2-217ENST00000492883 FAM111AQ96PZ2 611 aa13.23□□□□□ -0.29
CCM2-217ENST00000492883 MTERF1Q99551 399 aaKnown RBP13.23□□□□□ -0.29
CCM2-217ENST00000492883 CRB3Q9BUF7 120 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms