RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 NUDT9Q9BW91 350 aa13.52□□□□□ -0.25
BRCA1-218ENST00000489037 SPNS1Q9H2V7 528 aa13.52□□□□□ -0.25
BRCA1-218ENST00000489037 L2HGDHQ9H9P8 463 aa13.52□□□□□ -0.25
BRCA1-218ENST00000489037 CLK4Q9HAZ1 481 aaKnown RBP13.52□□□□□ -0.25
BRCA1-218ENST00000489037 A0A088AWK7 358 aa13.51□□□□□ -0.25
BRCA1-218ENST00000489037 TRIM49D1C9J1S8 452 aa13.51□□□□□ -0.25
BRCA1-218ENST00000489037 K7EM74 188 aa13.51□□□□□ -0.25
BRCA1-218ENST00000489037 RIPK2O43353 540 aa13.51□□□□□ -0.25
BRCA1-218ENST00000489037 GALR3O60755 368 aaPredicted RBP13.51□□□□□ -0.25
BRCA1-218ENST00000489037 ALOX12BO75342 701 aa13.51□□□□□ -0.25
BRCA1-218ENST00000489037 UQCRHP07919 91 aa13.51□□□□□ -0.25
BRCA1-218ENST00000489037 ZNF888P0CJ79 500 aaPredicted RBP13.51□□□□□ -0.25
BRCA1-218ENST00000489037 C8orf89P0DMQ9 161 aa13.51□□□□□ -0.25
BRCA1-218ENST00000489037 COL6A2P12110 1019 aa13.51□□□□□ -0.25
BRCA1-218ENST00000489037 EPB42P16452 691 aa13.51□□□□□ -0.25
BRCA1-218ENST00000489037 ZNF10P21506 573 aaPredicted RBP13.51□□□□□ -0.25
BRCA1-218ENST00000489037 CASRP41180 1078 aa13.51□□□□□ -0.25
BRCA1-218ENST00000489037 SOX8P57073 446 aa13.51□□□□□ -0.25
BRCA1-218ENST00000489037 CHIT1Q13231 466 aa13.51□□□□□ -0.25
BRCA1-218ENST00000489037 DEFB134Q4QY38 66 aa13.51□□□□□ -0.25
BRCA1-218ENST00000489037 NDUFAF7Q7L592 441 aa13.51□□□□□ -0.25
BRCA1-218ENST00000489037 TMEM151BQ8IW70 566 aa13.51□□□□□ -0.25
BRCA1-218ENST00000489037 PARP9Q8IXQ6 854 aa13.51□□□□□ -0.25
BRCA1-218ENST00000489037 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.51□□□□□ -0.25
BRCA1-218ENST00000489037 AFAP1L2Q8N4X5 818 aa13.51□□□□□ -0.25
BRCA1-218ENST00000489037 ANKRD53Q8N9V6 530 aa13.51□□□□□ -0.25
BRCA1-218ENST00000489037 UTP15Q8TED0 518 aaKnown RBP13.51□□□□□ -0.25
BRCA1-218ENST00000489037 UBTD2Q8WUN7 234 aa13.51□□□□□ -0.25
BRCA1-218ENST00000489037 DCAKDQ8WVC6 231 aa13.51□□□□□ -0.25
BRCA1-218ENST00000489037 C8orf44Q96CB5 159 aa13.51□□□□□ -0.25
BRCA1-218ENST00000489037 MTBPQ96DY7 904 aa13.51□□□□□ -0.25
BRCA1-218ENST00000489037 OR1F2PQ96R84 312 aa13.51□□□□□ -0.25
BRCA1-218ENST00000489037 SMAD5Q99717 465 aaKnown RBP13.51□□□□□ -0.25
BRCA1-218ENST00000489037 SLC6A16Q9GZN6 736 aa13.51□□□□□ -0.25
BRCA1-218ENST00000489037 LHPPQ9H008 270 aa13.51□□□□□ -0.25
BRCA1-218ENST00000489037 ZNF160Q9HCG1 818 aa13.51□□□□□ -0.25
BRCA1-218ENST00000489037 RIC8BQ9NVN3 520 aa13.51□□□□□ -0.25
BRCA1-218ENST00000489037 CPSF2Q9P2I0 782 aaKnown RBP13.51□□□□□ -0.25
BRCA1-218ENST00000489037 TMCO1Q9UM00 188 aa13.51□□□□□ -0.25
BRCA1-218ENST00000489037 TNPO3Q9Y5L0 923 aaKnown RBP13.51□□□□□ -0.25
BRCA1-218ENST00000489037 PCSK5Q92824 1860 aa13.5□□□□□ -0.25
BRCA1-218ENST00000489037 IQANK1A0A1B0GTG1 560 aa13.5□□□□□ -0.25
BRCA1-218ENST00000489037 ZNF860A6NHJ4 632 aa13.5□□□□□ -0.25
BRCA1-218ENST00000489037 PSMD12O00232 456 aaPredicted RBP13.5□□□□□ -0.25
BRCA1-218ENST00000489037 CLEC3AO75596 197 aa13.5□□□□□ -0.25
BRCA1-218ENST00000489037 PDGFAP04085 211 aa13.5□□□□□ -0.25
BRCA1-218ENST00000489037 ICAM2P13598 275 aa13.5□□□□□ -0.25
BRCA1-218ENST00000489037 JAK1P23458 1154 aa13.5□□□□□ -0.25
BRCA1-218ENST00000489037 PIK3CGP48736 1102 aa13.5□□□□□ -0.25
BRCA1-218ENST00000489037 AGTR2P50052 363 aa13.5□□□□□ -0.25
BRCA1-218ENST00000489037 CSRP3P50461 194 aa13.5□□□□□ -0.25
BRCA1-218ENST00000489037 ALDH18A1P54886 795 aaKnown RBP13.5□□□□□ -0.25
BRCA1-218ENST00000489037 RAB8AP61006 207 aa13.5□□□□□ -0.25
BRCA1-218ENST00000489037 EEF1A2Q05639 463 aaKnown RBP13.5□□□□□ -0.25
BRCA1-218ENST00000489037 TGM3Q08188 693 aa13.5□□□□□ -0.25
BRCA1-218ENST00000489037 DOC2AQ14183 400 aa13.5□□□□□ -0.25
BRCA1-218ENST00000489037 SETDB1Q15047 1291 aa13.5□□□□□ -0.25
BRCA1-218ENST00000489037 TBCCQ15814 346 aa13.5□□□□□ -0.25
BRCA1-218ENST00000489037 PFKFB4Q16877 469 aa13.5□□□□□ -0.25
BRCA1-218ENST00000489037 AGAP7PQ5VUJ5 663 aa13.5□□□□□ -0.25
BRCA1-218ENST00000489037 PDSS2Q86YH6 399 aa13.5□□□□□ -0.25
BRCA1-218ENST00000489037 KBTBD2Q8IY47 623 aa13.5□□□□□ -0.25
BRCA1-218ENST00000489037 ZADH2Q8N4Q0 377 aa13.5□□□□□ -0.25
BRCA1-218ENST00000489037 TEX9Q8N6V9 391 aa13.5□□□□□ -0.25
BRCA1-218ENST00000489037 CREB3L4Q8TEY5 395 aa13.5□□□□□ -0.25
BRCA1-218ENST00000489037 GAL3ST3Q96A11 431 aa13.5□□□□□ -0.25
BRCA1-218ENST00000489037 ISL2Q96A47 359 aa13.5□□□□□ -0.25
BRCA1-218ENST00000489037 WDR34Q96EX3 536 aa13.5□□□□□ -0.25
BRCA1-218ENST00000489037 PEX11GQ96HA9 241 aa13.5□□□□□ -0.25
BRCA1-218ENST00000489037 THOC3Q96J01 351 aaKnown RBP13.5□□□□□ -0.25
BRCA1-218ENST00000489037 AGAP4Q96P64 663 aa13.5□□□□□ -0.25
BRCA1-218ENST00000489037 CFAP46Q8IYW2 2715 aa13.49□□□□□ -0.25
BRCA1-218ENST00000489037 CHST10O43529 356 aa13.49□□□□□ -0.25
BRCA1-218ENST00000489037 SMIM24O75264 130 aa13.49□□□□□ -0.25
BRCA1-218ENST00000489037 JRKO75564 520 aa13.49□□□□□ -0.25
BRCA1-218ENST00000489037 FAM153BP0C7A2 387 aa13.49□□□□□ -0.25
BRCA1-218ENST00000489037 CASP2P42575 452 aa13.49□□□□□ -0.25
BRCA1-218ENST00000489037 MAGEA12P43365 314 aa13.49□□□□□ -0.25
BRCA1-218ENST00000489037 BTN3A2P78410 334 aa13.49□□□□□ -0.25
BRCA1-218ENST00000489037 SLC29A2Q14542 456 aa13.49□□□□□ -0.25
BRCA1-218ENST00000489037 FAM153CQ494X1 144 aa13.49□□□□□ -0.25
BRCA1-218ENST00000489037 TECRLQ5HYJ1 363 aa13.49□□□□□ -0.25
BRCA1-218ENST00000489037 MED27Q6P2C8 311 aa13.49□□□□□ -0.25
BRCA1-218ENST00000489037 TRIM40Q6P9F5 258 aa13.49□□□□□ -0.25
BRCA1-218ENST00000489037 ADGRD1Q6QNK2 874 aa13.49□□□□□ -0.25
BRCA1-218ENST00000489037 TMEM205Q6UW68 189 aa13.49□□□□□ -0.25
BRCA1-218ENST00000489037 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.49□□□□□ -0.25
BRCA1-218ENST00000489037 TBC1D20Q96BZ9 403 aa13.49□□□□□ -0.25
BRCA1-218ENST00000489037 TUBB6Q9BUF5 446 aa13.49□□□□□ -0.25
BRCA1-218ENST00000489037 VN1R1Q9GZP7 353 aa13.49□□□□□ -0.25
BRCA1-218ENST00000489037 KLHL31Q9H511 634 aa13.49□□□□□ -0.25
BRCA1-218ENST00000489037 EPS8L2Q9H6S3 715 aa13.49□□□□□ -0.25
BRCA1-218ENST00000489037 ZNF552Q9H707 407 aaPredicted RBP13.49□□□□□ -0.25
BRCA1-218ENST00000489037 COPS7BQ9H9Q2 264 aaPredicted RBP13.49□□□□□ -0.25
BRCA1-218ENST00000489037 COPG2Q9UBF2 871 aa13.49□□□□□ -0.25
BRCA1-218ENST00000489037 LOC102723996A0A087X1L8 192 aa13.48□□□□□ -0.25
BRCA1-218ENST00000489037 IGHV1-45A0A0A0MS14 117 aa13.48□□□□□ -0.25
BRCA1-218ENST00000489037 TTLL8A6PVC2 850 aa13.48□□□□□ -0.25
BRCA1-218ENST00000489037 MASP2O00187 686 aa13.48□□□□□ -0.25
BRCA1-218ENST00000489037 ERI3O43414 337 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms