RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 HGFP14210 728 aa13.2□□□□□ -0.3
COPS7B-221ENST00000488111 NAT1P18440 290 aa13.2□□□□□ -0.3
COPS7B-221ENST00000488111 PBLDP30039 288 aaPredicted RBP13.2□□□□□ -0.3
COPS7B-221ENST00000488111 KRT6CP48668 564 aa13.2□□□□□ -0.3
COPS7B-221ENST00000488111 CLDN2P57739 230 aa13.2□□□□□ -0.3
COPS7B-221ENST00000488111 IL2P60568 153 aa13.2□□□□□ -0.3
COPS7B-221ENST00000488111 CDK3Q00526 305 aa13.2□□□□□ -0.3
COPS7B-221ENST00000488111 GRIK2Q13002 908 aa13.2□□□□□ -0.3
COPS7B-221ENST00000488111 FAM98BQ52LJ0 330 aaKnown RBP13.2□□□□□ -0.3
COPS7B-221ENST00000488111 RSBN1Q5VWQ0 802 aaPredicted RBP13.2□□□□□ -0.3
COPS7B-221ENST00000488111 DESI1Q6ICB0 168 aa13.2□□□□□ -0.3
COPS7B-221ENST00000488111 ISCA2Q86U28 154 aa13.2□□□□□ -0.3
COPS7B-221ENST00000488111 SPEM1Q8N4L4 309 aa13.2□□□□□ -0.3
COPS7B-221ENST00000488111 REXO5Q96IC2 774 aaKnown RBP13.2□□□□□ -0.3
COPS7B-221ENST00000488111 TRIM39Q9HCM9 518 aa13.2□□□□□ -0.3
COPS7B-221ENST00000488111 TMA7Q9Y2S6 64 aaKnown RBP13.2□□□□□ -0.3
COPS7B-221ENST00000488111 PCYT1BQ9Y5K3 369 aaPredicted RBP13.2□□□□□ -0.3
COPS7B-221ENST00000488111 LOC100130705A0A1B0GUX0 176 aa13.2□□□□□ -0.3
COPS7B-221ENST00000488111 TMEM202A6NGA9 273 aa13.2□□□□□ -0.3
COPS7B-221ENST00000488111 LRRC72A6NJI9 287 aa13.2□□□□□ -0.3
COPS7B-221ENST00000488111 TSPAN12O95859 305 aa13.2□□□□□ -0.3
COPS7B-221ENST00000488111 IGFALSP35858 605 aa13.2□□□□□ -0.3
COPS7B-221ENST00000488111 FOXA1P55317 472 aa13.2□□□□□ -0.3
COPS7B-221ENST00000488111 HSPA14Q0VDF9 509 aa13.2□□□□□ -0.3
COPS7B-221ENST00000488111 BOP1Q14137 746 aaKnown RBP13.2□□□□□ -0.3
COPS7B-221ENST00000488111 AGERQ15109 404 aa13.2□□□□□ -0.3
COPS7B-221ENST00000488111 NEK5Q6P3R8 708 aa13.2□□□□□ -0.3
COPS7B-221ENST00000488111 SVOPLQ8N434 492 aa13.2□□□□□ -0.3
COPS7B-221ENST00000488111 ZBTB2Q8N680 514 aa13.2□□□□□ -0.3
COPS7B-221ENST00000488111 MCOLN3Q8TDD5 553 aa13.2□□□□□ -0.3
COPS7B-221ENST00000488111 EXT2Q93063 718 aa13.2□□□□□ -0.3
COPS7B-221ENST00000488111 TUBGCP3Q96CW5 907 aa13.2□□□□□ -0.3
COPS7B-221ENST00000488111 RBM4BQ9BQ04 359 aaKnown RBP13.2□□□□□ -0.3
COPS7B-221ENST00000488111 RBM4Q9BWF3 364 aaKnown RBP13.2□□□□□ -0.3
COPS7B-221ENST00000488111 GPR174Q9BXC1 333 aa13.2□□□□□ -0.3
COPS7B-221ENST00000488111 SGK2Q9HBY8 427 aa13.2□□□□□ -0.3
COPS7B-221ENST00000488111 NPAP1Q9NZP6 1156 aa13.2□□□□□ -0.3
COPS7B-221ENST00000488111 DNAJB9Q9UBS3 223 aa13.2□□□□□ -0.3
COPS7B-221ENST00000488111 PCDHGA10Q9Y5H3 936 aa13.2□□□□□ -0.3
COPS7B-221ENST00000488111 PABPN1LA6NDY0 278 aaKnown RBP13.19□□□□□ -0.3
COPS7B-221ENST00000488111 H0Y8X5 98 aa13.19□□□□□ -0.3
COPS7B-221ENST00000488111 CDC7O00311 574 aa13.19□□□□□ -0.3
COPS7B-221ENST00000488111 TBX1O43435 398 aa13.19□□□□□ -0.3
COPS7B-221ENST00000488111 VPS4BO75351 444 aa13.19□□□□□ -0.3
COPS7B-221ENST00000488111 CCNKO75909 580 aa13.19□□□□□ -0.3
COPS7B-221ENST00000488111 ALX3O95076 343 aa13.19□□□□□ -0.3
COPS7B-221ENST00000488111 ANXA6P08133 673 aa13.19□□□□□ -0.3
COPS7B-221ENST00000488111 PRR35P0CG20 571 aa13.19□□□□□ -0.3
COPS7B-221ENST00000488111 ZNF8P17098 575 aaPredicted RBP13.19□□□□□ -0.3
COPS7B-221ENST00000488111 PRKCAP17252 672 aa13.19□□□□□ -0.3
COPS7B-221ENST00000488111 CD9P21926 228 aa13.19□□□□□ -0.3
COPS7B-221ENST00000488111 IL12AP29459 219 aa13.19□□□□□ -0.3
COPS7B-221ENST00000488111 DIO3P55073 304 aa13.19□□□□□ -0.3
COPS7B-221ENST00000488111 CDH13P55290 713 aa13.19□□□□□ -0.3
COPS7B-221ENST00000488111 CHRNB3Q05901 458 aa13.19□□□□□ -0.3
COPS7B-221ENST00000488111 FADDQ13158 208 aa13.19□□□□□ -0.3
COPS7B-221ENST00000488111 CDK5R2Q13319 367 aa13.19□□□□□ -0.3
COPS7B-221ENST00000488111 IL18R1Q13478 541 aa13.19□□□□□ -0.3
COPS7B-221ENST00000488111 OR4D1Q15615 310 aa13.19□□□□□ -0.3
COPS7B-221ENST00000488111 ADAMTSL4Q6UY14 1074 aa13.19□□□□□ -0.3
COPS7B-221ENST00000488111 SPATA19Q7Z5L4 167 aa13.19□□□□□ -0.3
COPS7B-221ENST00000488111 TRAPPC5Q8IUR0 188 aa13.19□□□□□ -0.3
COPS7B-221ENST00000488111 DTWD1Q8N5C7 304 aa13.19□□□□□ -0.3
COPS7B-221ENST00000488111 DEFB119Q8N690 84 aa13.19□□□□□ -0.3
COPS7B-221ENST00000488111 LILRA3Q8N6C8 439 aaPredicted RBP13.19□□□□□ -0.3
COPS7B-221ENST00000488111 ASCC1Q8N9N2 400 aaKnown RBP13.19□□□□□ -0.3
COPS7B-221ENST00000488111 MCFD2Q8NI22 146 aa13.19□□□□□ -0.3
COPS7B-221ENST00000488111 ELMO1Q92556 727 aa13.19□□□□□ -0.3
COPS7B-221ENST00000488111 TEX37Q96LM6 180 aa13.19□□□□□ -0.3
COPS7B-221ENST00000488111 WDR26Q9H7D7 661 aa13.19□□□□□ -0.3
COPS7B-221ENST00000488111 INTS7Q9NVH2 962 aaKnown RBP13.19□□□□□ -0.3
COPS7B-221ENST00000488111 AIG1Q9NVV5 245 aa13.19□□□□□ -0.3
COPS7B-221ENST00000488111 KCTD5Q9NXV2 234 aa13.19□□□□□ -0.3
COPS7B-221ENST00000488111 SLAMF8Q9P0V8 285 aa13.19□□□□□ -0.3
COPS7B-221ENST00000488111 N6AMT1Q9Y5N5 214 aa13.19□□□□□ -0.3
COPS7B-221ENST00000488111 NPEPPSL1A6NEC2 478 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 POM121BA6NF01 834 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 CCDC154A6NI56 674 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 AGAP5A6NIR3 686 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 SYCE1LA8MT33 242 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 PPP6CO00743 305 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 SLC16A6O15403 523 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 NOBOXO60393 691 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 NPPAP01160 153 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 KRT8P05787 483 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 PCNAP12004 261 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 SLC26A3P40879 764 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 MAP2K4P45985 399 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 TRPC1P48995 793 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 TSNQ15631 228 aaKnown RBP13.18□□□□□ -0.3
COPS7B-221ENST00000488111 PLA2G4EQ3MJ16 856 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 AGAP6Q5VW22 663 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 NKAPQ8N5F7 415 aaKnown RBP13.18□□□□□ -0.3
COPS7B-221ENST00000488111 MED30Q96HR3 178 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 COX14Q96I36 57 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 AGAP4Q96P64 663 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 MMP27Q9H306 513 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 MID1IP1Q9NPA3 183 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 CCDC177Q9NQR7 707 aaPredicted RBP13.18□□□□□ -0.3
COPS7B-221ENST00000488111 WSB2Q9NYS7 404 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms