RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 PTPRTO14522 1441 aa3.38□□□□□ -1.87
LINC00888-204ENST00000487386 NOS1P29475 1434 aa3.38□□□□□ -1.87
LINC00888-204ENST00000487386 ARHGAP31Q2M1Z3 1444 aa3.38□□□□□ -1.87
LINC00888-204ENST00000487386 C17orf105B2RV13 164 aa3.38□□□□□ -1.87
LINC00888-204ENST00000487386 G3V2L1 256 aa3.38□□□□□ -1.87
LINC00888-204ENST00000487386 FIBPO43427 364 aa3.38□□□□□ -1.87
LINC00888-204ENST00000487386 TLX2O43763 284 aaPredicted RBP3.38□□□□□ -1.87
LINC00888-204ENST00000487386 RECQL5O94762 991 aaPredicted RBP3.38□□□□□ -1.87
LINC00888-204ENST00000487386 ACADSP16219 412 aa3.38□□□□□ -1.87
LINC00888-204ENST00000487386 ACAT1P24752 427 aaKnown RBP3.38□□□□□ -1.87
LINC00888-204ENST00000487386 PSMA3P25788 255 aa3.38□□□□□ -1.87
LINC00888-204ENST00000487386 PDHA2P29803 388 aa3.38□□□□□ -1.87
LINC00888-204ENST00000487386 DUTP33316 252 aaKnown RBP3.38□□□□□ -1.87
LINC00888-204ENST00000487386 HSPA4P34932 840 aa3.38□□□□□ -1.87
LINC00888-204ENST00000487386 CETN2P41208 172 aa3.38□□□□□ -1.87
LINC00888-204ENST00000487386 RAD23AP54725 363 aa3.38□□□□□ -1.87
LINC00888-204ENST00000487386 MTCP1P56278 107 aa3.38□□□□□ -1.87
LINC00888-204ENST00000487386 ZNF273Q14593 569 aa3.38□□□□□ -1.87
LINC00888-204ENST00000487386 FAM174BQ3ZCQ3 159 aa3.38□□□□□ -1.87
LINC00888-204ENST00000487386 KRBOX4Q5JUW0 171 aa3.38□□□□□ -1.87
LINC00888-204ENST00000487386 ZER1Q7Z7L7 766 aa3.38□□□□□ -1.87
LINC00888-204ENST00000487386 ERC1Q8IUD2 1116 aa3.38□□□□□ -1.87
LINC00888-204ENST00000487386 OR8H2Q8N162 312 aa3.38□□□□□ -1.87
LINC00888-204ENST00000487386 GBP7Q8N8V2 638 aaPredicted RBP3.38□□□□□ -1.87
LINC00888-204ENST00000487386 CCDC191Q8NCU4 936 aa3.38□□□□□ -1.87
LINC00888-204ENST00000487386 C17orf47Q8NEP4 570 aa3.38□□□□□ -1.87
LINC00888-204ENST00000487386 P2RX5Q93086 422 aa3.38□□□□□ -1.87
LINC00888-204ENST00000487386 PGM2Q96G03 612 aa3.38□□□□□ -1.87
LINC00888-204ENST00000487386 ATXN7L3BQ96GX2 97 aa3.38□□□□□ -1.87
LINC00888-204ENST00000487386 SLC45A3Q96JT2 553 aa3.38□□□□□ -1.87
LINC00888-204ENST00000487386 RMDN2Q96LZ7 410 aa3.38□□□□□ -1.87
LINC00888-204ENST00000487386 BTBD9Q96Q07 612 aa3.38□□□□□ -1.87
LINC00888-204ENST00000487386 SERINC2Q96SA4 455 aa3.38□□□□□ -1.87
LINC00888-204ENST00000487386 TRIM6Q9C030 488 aaPredicted RBP3.38□□□□□ -1.87
LINC00888-204ENST00000487386 B3GAT2Q9NPZ5 323 aa3.38□□□□□ -1.87
LINC00888-204ENST00000487386 TBC1D13Q9NVG8 400 aa3.38□□□□□ -1.87
LINC00888-204ENST00000487386 CLIC5Q9NZA1 410 aa3.38□□□□□ -1.87
LINC00888-204ENST00000487386 IL36AQ9UHA7 158 aa3.38□□□□□ -1.87
LINC00888-204ENST00000487386 PA2G4Q9UQ80 394 aaKnown RBP3.38□□□□□ -1.87
LINC00888-204ENST00000487386 PLA2R1Q13018 1463 aa3.38□□□□□ -1.87
LINC00888-204ENST00000487386 DIP2AQ14689 1571 aa3.38□□□□□ -1.87
LINC00888-204ENST00000487386 SETBP1Q9Y6X0 1596 aa3.38□□□□□ -1.87
LINC00888-204ENST00000487386 ROCK2O75116 1388 aaKnown RBP3.38□□□□□ -1.87
LINC00888-204ENST00000487386 NRXN3Q9Y4C0 1643 aa3.37□□□□□ -1.87
LINC00888-204ENST00000487386 SPATA31E1Q6ZUB1 1445 aa3.37□□□□□ -1.87
LINC00888-204ENST00000487386 K7EQD1 137 aa3.37□□□□□ -1.87
LINC00888-204ENST00000487386 CCDC175P0C221 793 aa3.37□□□□□ -1.87
LINC00888-204ENST00000487386 MYL6BP14649 208 aa3.37□□□□□ -1.87
LINC00888-204ENST00000487386 AADACP22760 399 aa3.37□□□□□ -1.87
LINC00888-204ENST00000487386 EDNRAP25101 427 aa3.37□□□□□ -1.87
LINC00888-204ENST00000487386 HOXC13P31276 330 aa3.37□□□□□ -1.87
LINC00888-204ENST00000487386 KRT20P35900 424 aa3.37□□□□□ -1.87
LINC00888-204ENST00000487386 PGFP49763 221 aa3.37□□□□□ -1.87
LINC00888-204ENST00000487386 RGS7P49802 495 aa3.37□□□□□ -1.87
LINC00888-204ENST00000487386 GMPSP49915 693 aaPredicted RBP3.37□□□□□ -1.87
LINC00888-204ENST00000487386 MS4A2Q01362 244 aa3.37□□□□□ -1.87
LINC00888-204ENST00000487386 NUCB1Q02818 461 aa3.37□□□□□ -1.87
LINC00888-204ENST00000487386 MZT1Q08AG7 82 aa3.37□□□□□ -1.87
LINC00888-204ENST00000487386 RBBP7Q16576 425 aa3.37□□□□□ -1.87
LINC00888-204ENST00000487386 ZNF239Q16600 458 aaKnown RBP3.37□□□□□ -1.87
LINC00888-204ENST00000487386 C6orf136Q5SQH8 315 aa3.37□□□□□ -1.87
LINC00888-204ENST00000487386 OR4C11Q6IEV9 310 aa3.37□□□□□ -1.87
LINC00888-204ENST00000487386 CYB5D1Q6P9G0 228 aa3.37□□□□□ -1.87
LINC00888-204ENST00000487386 ENPP7Q6UWV6 458 aa3.37□□□□□ -1.87
LINC00888-204ENST00000487386 C3P1Q6ZMU1 363 aa3.37□□□□□ -1.87
LINC00888-204ENST00000487386 CHMP1BQ7LBR1 199 aa3.37□□□□□ -1.87
LINC00888-204ENST00000487386 ABI3BPQ7Z7G0 1075 aa3.37□□□□□ -1.87
LINC00888-204ENST00000487386 LMNTD2Q8IXW0 634 aa3.37□□□□□ -1.87
LINC00888-204ENST00000487386 METTL4Q8N3J2 472 aa3.37□□□□□ -1.87
LINC00888-204ENST00000487386 OR4D10Q8NGI6 311 aa3.37□□□□□ -1.87
LINC00888-204ENST00000487386 MRPS27Q92552 414 aaKnown RBP3.37□□□□□ -1.87
LINC00888-204ENST00000487386 VPS33AQ96AX1 596 aa3.37□□□□□ -1.87
LINC00888-204ENST00000487386 GDAP1L1Q96MZ0 367 aa3.37□□□□□ -1.87
LINC00888-204ENST00000487386 GAL3ST4Q96RP7 486 aa3.37□□□□□ -1.87
LINC00888-204ENST00000487386 LGMNQ99538 433 aa3.37□□□□□ -1.87
LINC00888-204ENST00000487386 FAM129AQ9BZQ8 928 aa3.37□□□□□ -1.87
LINC00888-204ENST00000487386 OR10A4Q9H209 315 aa3.37□□□□□ -1.87
LINC00888-204ENST00000487386 THAP10Q9P2Z0 257 aaPredicted RBP3.37□□□□□ -1.87
LINC00888-204ENST00000487386 FBXL4Q9UKA2 621 aa3.37□□□□□ -1.87
LINC00888-204ENST00000487386 PILRBQ9UKJ0 227 aa3.37□□□□□ -1.87
LINC00888-204ENST00000487386 CPS1P31327 1500 aa3.37□□□□□ -1.87
LINC00888-204ENST00000487386 EIF3AQ14152 1382 aaKnown RBP3.37□□□□□ -1.87
LINC00888-204ENST00000487386 USP47Q96K76 1375 aa3.37□□□□□ -1.87
LINC00888-204ENST00000487386 CFAP65Q6ZU64 1925 aaKnown RBP3.36□□□□□ -1.87
LINC00888-204ENST00000487386 PIK3C2GO75747 1445 aa3.36□□□□□ -1.87
LINC00888-204ENST00000487386 UHRF1BP1Q6BDS2 1440 aa3.36□□□□□ -1.87
LINC00888-204ENST00000487386 TP53BP1Q12888 1972 aaPredicted RBP3.36□□□□□ -1.87
LINC00888-204ENST00000487386 NLRP1Q9C000 1473 aa3.36□□□□□ -1.87
LINC00888-204ENST00000487386 IGHV4-30-2A0A087WSY4 118 aa3.36□□□□□ -1.87
LINC00888-204ENST00000487386 ASB14A6NK59 587 aa3.36□□□□□ -1.87
LINC00888-204ENST00000487386 TFECO14948 347 aaPredicted RBP3.36□□□□□ -1.87
LINC00888-204ENST00000487386 CYTIPO60759 359 aa3.36□□□□□ -1.87
LINC00888-204ENST00000487386 SRSF10O75494 262 aaKnown RBP3.36□□□□□ -1.87
LINC00888-204ENST00000487386 NXPH4O95158 308 aa3.36□□□□□ -1.87
LINC00888-204ENST00000487386 IGHV3-13P01766 116 aa3.36□□□□□ -1.87
LINC00888-204ENST00000487386 THEGLP0DJG4 465 aa3.36□□□□□ -1.87
LINC00888-204ENST00000487386 SFTPDP35247 375 aa3.36□□□□□ -1.87
LINC00888-204ENST00000487386 KRT2P35908 639 aa3.36□□□□□ -1.87
LINC00888-204ENST00000487386 MFAP3P55082 362 aa3.36□□□□□ -1.87
LINC00888-204ENST00000487386 COX10Q12887 443 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms