RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 OR52E6Q96RD3 313 aa13.98□□□□□ -0.17
POLR2J3-204ENST00000486319 EBPLQ9BY08 206 aa13.98□□□□□ -0.17
POLR2J3-204ENST00000486319 SPNS1Q9H2V7 528 aa13.98□□□□□ -0.17
POLR2J3-204ENST00000486319 CAAP1Q9H8G2 361 aa13.98□□□□□ -0.17
POLR2J3-204ENST00000486319 CMTM6Q9NX76 183 aa13.98□□□□□ -0.17
POLR2J3-204ENST00000486319 KLF15Q9UIH9 416 aa13.98□□□□□ -0.17
POLR2J3-204ENST00000486319 ICKQ9UPZ9 632 aa13.98□□□□□ -0.17
POLR2J3-204ENST00000486319 ARHGEF17Q96PE2 2063 aaPredicted RBP13.98□□□□□ -0.17
POLR2J3-204ENST00000486319 TMEM131Q92545 1883 aa13.97□□□□□ -0.17
POLR2J3-204ENST00000486319 ANKDD1BA6NHY2 528 aa13.97□□□□□ -0.17
POLR2J3-204ENST00000486319 CCNDBP1O95273 360 aa13.97□□□□□ -0.17
POLR2J3-204ENST00000486319 ANPEPP15144 967 aa13.97□□□□□ -0.17
POLR2J3-204ENST00000486319 TIA1P31483 386 aaKnown RBP eCLIP13.97□□□□□ -0.17
POLR2J3-204ENST00000486319 MSX2P35548 267 aaPredicted RBP13.97□□□□□ -0.17
POLR2J3-204ENST00000486319 ERFP50548 548 aa13.97□□□□□ -0.17
POLR2J3-204ENST00000486319 REEP5Q00765 189 aa13.97□□□□□ -0.17
POLR2J3-204ENST00000486319 RBBP5Q15291 538 aaKnown RBP13.97□□□□□ -0.17
POLR2J3-204ENST00000486319 NANOGP8Q6NSW7 305 aa13.97□□□□□ -0.17
POLR2J3-204ENST00000486319 SLC30A9Q6PML9 568 aa13.97□□□□□ -0.17
POLR2J3-204ENST00000486319 SLCO6A1Q86UG4 719 aa13.97□□□□□ -0.17
POLR2J3-204ENST00000486319 GPR180Q86V85 440 aa13.97□□□□□ -0.17
POLR2J3-204ENST00000486319 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.97□□□□□ -0.17
POLR2J3-204ENST00000486319 FAM156AQ8NDB6 213 aa13.97□□□□□ -0.17
POLR2J3-204ENST00000486319 OR2A1Q8NGT9 310 aa13.97□□□□□ -0.17
POLR2J3-204ENST00000486319 PYDC1Q8WXC3 89 aa13.97□□□□□ -0.17
POLR2J3-204ENST00000486319 GTF2H4Q92759 462 aa13.97□□□□□ -0.17
POLR2J3-204ENST00000486319 CGREF1Q99674 301 aa13.97□□□□□ -0.17
POLR2J3-204ENST00000486319 GSDMCQ9BYG8 508 aa13.97□□□□□ -0.17
POLR2J3-204ENST00000486319 MUC13Q9H3R2 512 aa13.97□□□□□ -0.17
POLR2J3-204ENST00000486319 XKR8Q9H6D3 395 aa13.97□□□□□ -0.17
POLR2J3-204ENST00000486319 NANOGQ9H9S0 305 aa13.97□□□□□ -0.17
POLR2J3-204ENST00000486319 AHSPQ9NZD4 102 aa13.97□□□□□ -0.17
POLR2J3-204ENST00000486319 OR6C2Q9NZP2 312 aa13.97□□□□□ -0.17
POLR2J3-204ENST00000486319 PNMA8BQ9ULN7 279 aaPredicted RBP13.97□□□□□ -0.17
POLR2J3-204ENST00000486319 A6NCN8 305 aa13.96□□□□□ -0.17
POLR2J3-204ENST00000486319 PCDH7O60245 1069 aa13.96□□□□□ -0.17
POLR2J3-204ENST00000486319 DNAJA2O60884 412 aa13.96□□□□□ -0.17
POLR2J3-204ENST00000486319 ERN1O75460 977 aaKnown RBP13.96□□□□□ -0.17
POLR2J3-204ENST00000486319 TGFB1P01137 390 aa13.96□□□□□ -0.17
POLR2J3-204ENST00000486319 ANXA4P09525 319 aaPredicted RBP13.96□□□□□ -0.17
POLR2J3-204ENST00000486319 HRH2P25021 359 aa13.96□□□□□ -0.17
POLR2J3-204ENST00000486319 PSMB5P28074 263 aa13.96□□□□□ -0.17
POLR2J3-204ENST00000486319 PTDSS1P48651 473 aaKnown RBP13.96□□□□□ -0.17
POLR2J3-204ENST00000486319 BLKP51451 505 aa13.96□□□□□ -0.17
POLR2J3-204ENST00000486319 HNRNPFP52597 415 aaKnown RBP13.96□□□□□ -0.17
POLR2J3-204ENST00000486319 RAE1P78406 368 aaKnown RBP13.96□□□□□ -0.17
POLR2J3-204ENST00000486319 SHC2P98077 582 aa13.96□□□□□ -0.17
POLR2J3-204ENST00000486319 CCDC157Q569K6 752 aa13.96□□□□□ -0.17
POLR2J3-204ENST00000486319 C6orf10Q5SRN2 563 aa13.96□□□□□ -0.17
POLR2J3-204ENST00000486319 AMIGO1Q86WK6 493 aa13.96□□□□□ -0.17
POLR2J3-204ENST00000486319 METTL4Q8N3J2 472 aa13.96□□□□□ -0.17
POLR2J3-204ENST00000486319 ZNF740Q8NDX6 193 aa13.96□□□□□ -0.17
POLR2J3-204ENST00000486319 ZNF548Q8NEK5 533 aaPredicted RBP13.96□□□□□ -0.17
POLR2J3-204ENST00000486319 GPR156Q8NFN8 814 aa13.96□□□□□ -0.17
POLR2J3-204ENST00000486319 OR8J3Q8NGG0 315 aa13.96□□□□□ -0.17
POLR2J3-204ENST00000486319 CCL4L1Q8NHW4 92 aa13.96□□□□□ -0.17
POLR2J3-204ENST00000486319 GPBAR1Q8TDU6 330 aa13.96□□□□□ -0.17
POLR2J3-204ENST00000486319 LMX1AQ8TE12 382 aa13.96□□□□□ -0.17
POLR2J3-204ENST00000486319 NUDT8Q8WV74 236 aa13.96□□□□□ -0.17
POLR2J3-204ENST00000486319 ZFPM2Q8WW38 1151 aa13.96□□□□□ -0.17
POLR2J3-204ENST00000486319 LCN9Q8WX39 176 aa13.96□□□□□ -0.17
POLR2J3-204ENST00000486319 EGLN2Q96KS0 407 aa13.96□□□□□ -0.17
POLR2J3-204ENST00000486319 NRTNQ99748 197 aa13.96□□□□□ -0.17
POLR2J3-204ENST00000486319 SH3GL1Q99961 368 aa13.96□□□□□ -0.17
POLR2J3-204ENST00000486319 PCDHAC1Q9H158 963 aa13.96□□□□□ -0.17
POLR2J3-204ENST00000486319 ALG2Q9H553 416 aa13.96□□□□□ -0.17
POLR2J3-204ENST00000486319 CUEDC1Q9NWM3 386 aaPredicted RBP13.96□□□□□ -0.17
POLR2J3-204ENST00000486319 TOR4AQ9NXH8 423 aa13.96□□□□□ -0.17
POLR2J3-204ENST00000486319 SLAMF8Q9P0V8 285 aa13.96□□□□□ -0.17
POLR2J3-204ENST00000486319 ZNF624Q9P2J8 865 aaPredicted RBP13.96□□□□□ -0.17
POLR2J3-204ENST00000486319 MAN2B2Q9Y2E5 1009 aa13.96□□□□□ -0.17
POLR2J3-204ENST00000486319 AP3M1Q9Y2T2 418 aa13.96□□□□□ -0.17
POLR2J3-204ENST00000486319 SNRNP200O75643 2136 aaKnown RBP13.96□□□□□ -0.17
POLR2J3-204ENST00000486319 GNG14A0A1W2PPG7 69 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 H7BY64 318 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 AQP9O43315 295 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 SIGLEC6O43699 453 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 HYAL3O43820 417 aaPredicted RBP13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 PRICKLE3O43900 615 aaPredicted RBP13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 ANP32DO95626 131 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 EML2O95834 649 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 ALPPL2P10696 532 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 KIR3DL1P43629 444 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 SESN3P58005 492 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 YBX1P67809 324 aaKnown RBP13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 PGS1Q32NB8 556 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 PRRT3Q5FWE3 981 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 SPATA24Q86W54 205 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 DHFR2Q86XF0 187 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 NRROSQ86YC3 692 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 TTLQ8NG68 377 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 OR4C6Q8NH72 309 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 ADAMTS14Q8WXS8 1223 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 ZUFSPQ96AP4 578 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 ITCHQ96J02 903 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 LRGUKQ96M69 825 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 PPM1MQ96MI6 270 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 PRAP1Q96NZ9 151 aa13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 PRPF18Q99633 342 aaKnown RBP13.95□□□□□ -0.18
POLR2J3-204ENST00000486319 DUSP23Q9BVJ7 150 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms