RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 SLC26A1Q9H2B4 701 aa9.31□□□□□ -0.92
SND1-213ENST00000486037 C12orf65Q9H3J6 166 aaKnown RBP9.31□□□□□ -0.92
SND1-213ENST00000486037 WDR54Q9H977 334 aa9.31□□□□□ -0.92
SND1-213ENST00000486037 CNOT10Q9H9A5 744 aaKnown RBP9.31□□□□□ -0.92
SND1-213ENST00000486037 MKS1Q9NXB0 559 aa9.31□□□□□ -0.92
SND1-213ENST00000486037 SPHK1Q9NYA1 384 aa9.31□□□□□ -0.92
SND1-213ENST00000486037 CRYL1Q9Y2S2 319 aa9.31□□□□□ -0.92
SND1-213ENST00000486037 MRPS2Q9Y399 296 aaKnown RBP9.31□□□□□ -0.92
SND1-213ENST00000486037 A0A096LPK6 155 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 MGAT4DA6NG13 374 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 VSTM2BA6NLU5 285 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 MATN2O00339 956 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 COPEO14579 308 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 SGTAO43765 313 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 OR1I1O60431 355 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 NDUFS3O75489 264 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 WISP3O95389 354 aaPredicted RBP9.3□□□□□ -0.92
SND1-213ENST00000486037 MED26O95402 600 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 ONECUT2O95948 504 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 C2P06681 752 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 SLC35G4P0C7Q5 338 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 ITGAMP11215 1152 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 UGT2B7P16662 529 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 SAT1P21673 171 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 FDXRP22570 491 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 NDUFS1P28331 727 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 TYK2P29597 1187 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 FMO4P31512 558 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 MDH1P40925 334 aaKnown RBP9.3□□□□□ -0.92
SND1-213ENST00000486037 TTPAP49638 278 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 SLC18A1P54219 525 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 CDKN2DP55273 166 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 WDR4P57081 412 aaKnown RBP9.3□□□□□ -0.92
SND1-213ENST00000486037 RAB10P61026 200 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 IRF9Q00978 393 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 GUCY1A3Q02108 690 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 KLC1Q07866 573 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 SNTB1Q13884 538 aaKnown RBP9.3□□□□□ -0.92
SND1-213ENST00000486037 ZNF460Q14592 562 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 GPR33Q49SQ1 333 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 AARS2Q5JTZ9 985 aaKnown RBP9.3□□□□□ -0.92
SND1-213ENST00000486037 CTSL3PQ5NE16 218 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 ZDHHC20Q5W0Z9 365 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 ATG9BQ674R7 924 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 TTC19Q6DKK2 380 aaPredicted RBP9.3□□□□□ -0.92
SND1-213ENST00000486037 TLDC1Q6P9B6 456 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 CNPY4Q8N129 248 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 PLD6Q8N2A8 252 aaKnown RBP9.3□□□□□ -0.92
SND1-213ENST00000486037 RPRMLQ8N4K4 120 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 MGARPQ8TDB4 240 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 TCP10LQ8TDR4 215 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 OR2A14Q96R47 310 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 POLDIP3Q9BY77 421 aaKnown RBP9.3□□□□□ -0.92
SND1-213ENST00000486037 P2RY12Q9H244 342 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 VPS11Q9H270 941 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 IRAK4Q9NWZ3 460 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 SLC17A7Q9P2U7 560 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 CORO1CQ9ULV4 474 aaPredicted RBP9.3□□□□□ -0.92
SND1-213ENST00000486037 RNF6Q9Y252 685 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 KLHL20Q9Y2M5 609 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 MED16Q9Y2X0 877 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 ASB1Q9Y576 335 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 MAU2Q9Y6X3 613 aa9.3□□□□□ -0.92
SND1-213ENST00000486037 A0A1B0GX78 115 aa9.29□□□□□ -0.92
SND1-213ENST00000486037 OR5H15A6NDH6 313 aa9.29□□□□□ -0.92
SND1-213ENST00000486037 C2orf74A8MZ97 194 aa9.29□□□□□ -0.92
SND1-213ENST00000486037 ALBP02768 609 aa9.29□□□□□ -0.92
SND1-213ENST00000486037 SLC35E2BP0CK96 405 aa9.29□□□□□ -0.92
SND1-213ENST00000486037 PKMP14618 531 aaKnown RBP9.29□□□□□ -0.92
SND1-213ENST00000486037 ACPPP15309 386 aa9.29□□□□□ -0.92
SND1-213ENST00000486037 ABOP16442 354 aa9.29□□□□□ -0.92
SND1-213ENST00000486037 DNASE1P24855 282 aa9.29□□□□□ -0.92
SND1-213ENST00000486037 ACRV1P26436 265 aa9.29□□□□□ -0.92
SND1-213ENST00000486037 CRHR1P34998 444 aa9.29□□□□□ -0.92
SND1-213ENST00000486037 DLX5P56178 289 aa9.29□□□□□ -0.92
SND1-213ENST00000486037 POU4F1Q01851 419 aa9.29□□□□□ -0.92
SND1-213ENST00000486037 EEF1A2Q05639 463 aaKnown RBP9.29□□□□□ -0.92
SND1-213ENST00000486037 PRKG2Q13237 762 aa9.29□□□□□ -0.92
SND1-213ENST00000486037 KRT33BQ14525 404 aa9.29□□□□□ -0.92
SND1-213ENST00000486037 SLC5A12Q1EHB4 618 aa9.29□□□□□ -0.92
SND1-213ENST00000486037 ZNF766Q5HY98 468 aa9.29□□□□□ -0.92
SND1-213ENST00000486037 GPRC6AQ5T6X5 926 aa9.29□□□□□ -0.92
SND1-213ENST00000486037 RNF187Q5TA31 235 aaPredicted RBP9.29□□□□□ -0.92
SND1-213ENST00000486037 FAM45BPQ6NSW5 357 aa9.29□□□□□ -0.92
SND1-213ENST00000486037 NEK10Q6ZWH5 1172 aa9.29□□□□□ -0.92
SND1-213ENST00000486037 LAPTM4BQ86VI4 370 aa9.29□□□□□ -0.92
SND1-213ENST00000486037 AMIGO1Q86WK6 493 aa9.29□□□□□ -0.92
SND1-213ENST00000486037 CCDC71Q8IV32 467 aaPredicted RBP9.29□□□□□ -0.92
SND1-213ENST00000486037 PHC2Q8IXK0 858 aa9.29□□□□□ -0.92
SND1-213ENST00000486037 CIARTQ8N365 385 aaPredicted RBP9.29□□□□□ -0.92
SND1-213ENST00000486037 DDHD1Q8NEL9 900 aa9.29□□□□□ -0.92
SND1-213ENST00000486037 OR2L2Q8NH16 312 aa9.29□□□□□ -0.92
SND1-213ENST00000486037 FAM45AQ8TCE6 357 aa9.29□□□□□ -0.92
SND1-213ENST00000486037 DTX3LQ8TDB6 740 aa9.29□□□□□ -0.92
SND1-213ENST00000486037 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.29□□□□□ -0.926e-8■■■■■ 34.4
SND1-213ENST00000486037 BIRC8Q96P09 236 aa9.29□□□□□ -0.92
SND1-213ENST00000486037 SIGLEC12Q96PQ1 595 aa9.29□□□□□ -0.92
SND1-213ENST00000486037 FERD3LQ96RJ6 166 aa9.29□□□□□ -0.92
SND1-213ENST00000486037 HGH1Q9BTY7 390 aa9.29□□□□□ -0.92
SND1-213ENST00000486037 CRB3Q9BUF7 120 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms