RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 PDPRQ8NCN5 879 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 C7orf57Q8NEG2 295 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 MNS1Q8NEH6 495 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 OR9A4Q8NGU2 314 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 RHEBL1Q8TAI7 183 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 M1APQ8TC57 530 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 CPT1CQ8TCG5 803 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 FBF1Q8TES7 1133 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 CREB3L4Q8TEY5 395 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 PSMF1Q92530 271 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 NPLQ9BXD5 320 aaPredicted RBP6.62□□□□□ -1.35
VPS50-218ENST00000485994 VN1R1Q9GZP7 353 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 RNF32Q9H0A6 362 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 CNOT10Q9H9A5 744 aaKnown RBP6.62□□□□□ -1.35
VPS50-218ENST00000485994 NMRAL1Q9HBL8 299 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 SLAMF7Q9NQ25 335 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 RIC8BQ9NVN3 520 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 MKL2Q9ULH7 1088 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 SH2B3Q9UQQ2 575 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 MRPS2Q9Y399 296 aaKnown RBP6.62□□□□□ -1.35
VPS50-218ENST00000485994 DYRK1BQ9Y463 629 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 PCDHGB6Q9Y5F9 930 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 MYO7BQ6PIF6 2116 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 SYNDIG1LA6NDD5 238 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 MAGEB17A8MXT2 336 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 TAPBPO15533 448 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 OR1F1O43749 312 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 VPS4BO75351 444 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 STK16O75716 305 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 URI1O94763 535 aaPredicted RBP6.61□□□□□ -1.35
VPS50-218ENST00000485994 ALOX12P18054 663 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 SAT1P21673 171 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 SOX11P35716 441 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 TSFMP43897 325 aaKnown RBP6.61□□□□□ -1.35
VPS50-218ENST00000485994 KCNC1P48547 511 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 SNRPNP63162 240 aaKnown RBP6.61□□□□□ -1.35
VPS50-218ENST00000485994 RGS1Q08116 209 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 CDC16Q13042 620 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 MFAP5Q13361 173 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 LAPTM5Q13571 262 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 UBAP2LQ14157 1087 aaKnown RBP6.61□□□□□ -1.35
VPS50-218ENST00000485994 ZNF460Q14592 562 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 PCOLCEQ15113 449 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 ADPRMQ3LIE5 342 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 XP32Q5T750 250 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 IRAK1BP1Q5VVH5 260 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 PLAG1Q6DJT9 500 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 C8orf74Q6P047 294 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 SHISA6Q6ZSJ9 500 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 FRA10AC1Q70Z53 315 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 ABHD13Q7L211 337 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 CPEB2Q7Z5Q1 589 aaKnown RBP6.61□□□□□ -1.35
VPS50-218ENST00000485994 PDSS2Q86YH6 399 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 GPSM1Q86YR5 675 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 PARP9Q8IXQ6 854 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 KRT78Q8N1N4 520 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 ANKRD53Q8N9V6 530 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 ZNF740Q8NDX6 193 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 DNAJB14Q8TBM8 379 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 UTP15Q8TED0 518 aaKnown RBP6.61□□□□□ -1.35
VPS50-218ENST00000485994 METTL21AQ8WXB1 218 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 THOC3Q96J01 351 aaKnown RBP6.61□□□□□ -1.35
VPS50-218ENST00000485994 ATOH8Q96SQ7 321 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 EGFL8Q99944 293 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 WDR77Q9BQA1 342 aaPredicted RBP6.61□□□□□ -1.35
VPS50-218ENST00000485994 TRIM4Q9C037 500 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 RHBGQ9H310 441 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 EPS8L2Q9H6S3 715 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 ABCF3Q9NUQ8 709 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 PSD3Q9NYI0 1048 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 C19orf25Q9UFG5 118 aaPredicted RBP6.61□□□□□ -1.35
VPS50-218ENST00000485994 MTRF1LQ9UGC7 380 aaKnown RBP6.61□□□□□ -1.35
VPS50-218ENST00000485994 DMGDHQ9UI17 866 aaKnown RBP6.61□□□□□ -1.35
VPS50-218ENST00000485994 VPS4AQ9UN37 437 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 ACOT9Q9Y305 439 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 NAALAD2Q9Y3Q0 740 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 TSC22D4Q9Y3Q8 395 aa6.61□□□□□ -1.35
VPS50-218ENST00000485994 NAV2Q8IVL1 2488 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 CPAMD8Q8IZJ3 1885 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 PCNX1Q96RV3 2341 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 HECTD1Q9ULT8 2610 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 A0A087X1B8 175 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 HMX2A2RU54 273 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 CTAGE15A4D2H0 777 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 NPEPPSL1A6NEC2 478 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 SGK494L7N484 410 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 CLGNO14967 610 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 NDUFS4O43181 175 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 CHST10O43529 356 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 KLK8O60259 260 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 MAN1A2O60476 641 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 CLEC3AO75596 197 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 PIAS1O75925 651 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 KLHL18O94889 574 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 CBX6O95503 412 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 LTA4HP09960 611 aaKnown RBP6.6□□□□□ -1.35
VPS50-218ENST00000485994 CTAGE8P0CG41 777 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 SLC35E2BP0CK96 405 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 C8orf89P0DMQ9 161 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 MYBL2P10244 700 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms