RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 UBE2E3Q969T4 207 aa11.84□□□□□ -0.51
PTCD1-205ENST00000485746 THOC3Q96J01 351 aaKnown RBP11.84□□□□□ -0.51
PTCD1-205ENST00000485746 EFCAB11Q9BUY7 163 aa11.84□□□□□ -0.51
PTCD1-205ENST00000485746 MFRPQ9BY79 579 aa11.84□□□□□ -0.51
PTCD1-205ENST00000485746 RBCK1Q9BYM8 510 aa11.84□□□□□ -0.51
PTCD1-205ENST00000485746 TRIM4Q9C037 500 aa11.84□□□□□ -0.51
PTCD1-205ENST00000485746 PITHD1Q9GZP4 211 aaPredicted RBP11.84□□□□□ -0.51
PTCD1-205ENST00000485746 RHBGQ9H310 441 aa11.84□□□□□ -0.51
PTCD1-205ENST00000485746 NT5DC2Q9H857 520 aa11.84□□□□□ -0.51
PTCD1-205ENST00000485746 ZNF160Q9HCG1 818 aa11.84□□□□□ -0.51
PTCD1-205ENST00000485746 C19orf25Q9UFG5 118 aaPredicted RBP11.84□□□□□ -0.51
PTCD1-205ENST00000485746 TNPO3Q9Y5L0 923 aaKnown RBP11.84□□□□□ -0.51
PTCD1-205ENST00000485746 ZFYVE26Q68DK2 2539 aa11.84□□□□□ -0.51
PTCD1-205ENST00000485746 A0A088AWK7 358 aa11.83□□□□□ -0.52
PTCD1-205ENST00000485746 IQANK1A0A1B0GTG1 560 aa11.83□□□□□ -0.52
PTCD1-205ENST00000485746 CHST10O43529 356 aa11.83□□□□□ -0.52
PTCD1-205ENST00000485746 GALR3O60755 368 aaPredicted RBP11.83□□□□□ -0.52
PTCD1-205ENST00000485746 JRKO75564 520 aa11.83□□□□□ -0.52
PTCD1-205ENST00000485746 CDC123O75794 336 aaPredicted RBP11.83□□□□□ -0.52
PTCD1-205ENST00000485746 WFS1O76024 890 aa11.83□□□□□ -0.52
PTCD1-205ENST00000485746 B3GALT4O96024 378 aa11.83□□□□□ -0.52
PTCD1-205ENST00000485746 PDGFAP04085 211 aa11.83□□□□□ -0.52
PTCD1-205ENST00000485746 ZNF10P21506 573 aaPredicted RBP11.83□□□□□ -0.52
PTCD1-205ENST00000485746 IL10P22301 178 aa11.83□□□□□ -0.52
PTCD1-205ENST00000485746 GSTM2P28161 218 aa11.83□□□□□ -0.52
PTCD1-205ENST00000485746 ALDH18A1P54886 795 aaKnown RBP11.83□□□□□ -0.52
PTCD1-205ENST00000485746 SNRPNP63162 240 aaKnown RBP11.83□□□□□ -0.52
PTCD1-205ENST00000485746 OLR1P78380 273 aa11.83□□□□□ -0.52
PTCD1-205ENST00000485746 BTN3A2P78410 334 aa11.83□□□□□ -0.52
PTCD1-205ENST00000485746 SLC29A2Q14542 456 aa11.83□□□□□ -0.52
PTCD1-205ENST00000485746 AGAP7PQ5VUJ5 663 aa11.83□□□□□ -0.52
PTCD1-205ENST00000485746 PDSS2Q86YH6 399 aa11.83□□□□□ -0.52
PTCD1-205ENST00000485746 HPS6Q86YV9 775 aa11.83□□□□□ -0.52
PTCD1-205ENST00000485746 KBTBD2Q8IY47 623 aa11.83□□□□□ -0.52
PTCD1-205ENST00000485746 OR5T3Q8NGG3 340 aa11.83□□□□□ -0.52
PTCD1-205ENST00000485746 ATP6V1E2Q96A05 226 aa11.83□□□□□ -0.52
PTCD1-205ENST00000485746 MTBPQ96DY7 904 aa11.83□□□□□ -0.52
PTCD1-205ENST00000485746 AGAP4Q96P64 663 aa11.83□□□□□ -0.52
PTCD1-205ENST00000485746 SMAD5Q99717 465 aaKnown RBP11.83□□□□□ -0.52
PTCD1-205ENST00000485746 VN1R1Q9GZP7 353 aa11.83□□□□□ -0.52
PTCD1-205ENST00000485746 LHPPQ9H008 270 aa11.83□□□□□ -0.52
PTCD1-205ENST00000485746 EHD1Q9H4M9 534 aa11.83□□□□□ -0.52
PTCD1-205ENST00000485746 KLHL31Q9H511 634 aa11.83□□□□□ -0.52
PTCD1-205ENST00000485746 L2HGDHQ9H9P8 463 aa11.83□□□□□ -0.52
PTCD1-205ENST00000485746 SLAMF7Q9NQ25 335 aa11.83□□□□□ -0.52
PTCD1-205ENST00000485746 C5AR2Q9P296 337 aa11.83□□□□□ -0.52
PTCD1-205ENST00000485746 MAP10Q9P2G4 905 aa11.83□□□□□ -0.52
PTCD1-205ENST00000485746 TMCO1Q9UM00 188 aa11.83□□□□□ -0.52
PTCD1-205ENST00000485746 SNRNP200O75643 2136 aaKnown RBP11.83□□□□□ -0.52
PTCD1-205ENST00000485746 A0A0G2JN53 185 aa11.82□□□□□ -0.52
PTCD1-205ENST00000485746 TTLL8A6PVC2 850 aa11.82□□□□□ -0.52
PTCD1-205ENST00000485746 PYCARD-AS1I3L0S3 204 aa11.82□□□□□ -0.52
PTCD1-205ENST00000485746 ERI3O43414 337 aaKnown RBP11.82□□□□□ -0.52
PTCD1-205ENST00000485746 B4GALT2O60909 372 aa11.82□□□□□ -0.52
PTCD1-205ENST00000485746 CLEC3AO75596 197 aa11.82□□□□□ -0.52
PTCD1-205ENST00000485746 COL6A2P12110 1019 aa11.82□□□□□ -0.52
PTCD1-205ENST00000485746 ICAM2P13598 275 aa11.82□□□□□ -0.52
PTCD1-205ENST00000485746 JAK1P23458 1154 aa11.82□□□□□ -0.52
PTCD1-205ENST00000485746 CASRP41180 1078 aa11.82□□□□□ -0.52
PTCD1-205ENST00000485746 PLA2G16P53816 162 aa11.82□□□□□ -0.52
PTCD1-205ENST00000485746 AP2B1P63010 937 aa11.82□□□□□ -0.52
PTCD1-205ENST00000485746 TLE1Q04724 770 aa11.82□□□□□ -0.52
PTCD1-205ENST00000485746 SETDB1Q15047 1291 aa11.82□□□□□ -0.52
PTCD1-205ENST00000485746 MED27Q6P2C8 311 aa11.82□□□□□ -0.52
PTCD1-205ENST00000485746 TRIM40Q6P9F5 258 aa11.82□□□□□ -0.52
PTCD1-205ENST00000485746 PLD6Q8N2A8 252 aaKnown RBP11.82□□□□□ -0.52
PTCD1-205ENST00000485746 ZADH2Q8N4Q0 377 aa11.82□□□□□ -0.52
PTCD1-205ENST00000485746 AFAP1L2Q8N4X5 818 aa11.82□□□□□ -0.52
PTCD1-205ENST00000485746 PTGR2Q8N8N7 351 aaPredicted RBP11.82□□□□□ -0.52
PTCD1-205ENST00000485746 CREB3L4Q8TEY5 395 aa11.82□□□□□ -0.52
PTCD1-205ENST00000485746 UBTD2Q8WUN7 234 aa11.82□□□□□ -0.52
PTCD1-205ENST00000485746 GAL3ST3Q96A11 431 aa11.82□□□□□ -0.52
PTCD1-205ENST00000485746 TBC1D20Q96BZ9 403 aa11.82□□□□□ -0.52
PTCD1-205ENST00000485746 PHF21BQ96EK2 531 aa11.82□□□□□ -0.52
PTCD1-205ENST00000485746 SEC16BQ96JE7 1060 aa11.82□□□□□ -0.52
PTCD1-205ENST00000485746 MAGEB10Q96LZ2 347 aaPredicted RBP11.82□□□□□ -0.52
PTCD1-205ENST00000485746 OR1F2PQ96R84 312 aa11.82□□□□□ -0.52
PTCD1-205ENST00000485746 SLC6A16Q9GZN6 736 aa11.82□□□□□ -0.52
PTCD1-205ENST00000485746 REXO4Q9GZR2 422 aaKnown RBP11.82□□□□□ -0.52
PTCD1-205ENST00000485746 ACTR8Q9H981 624 aa11.82□□□□□ -0.52
PTCD1-205ENST00000485746 COPS7BQ9H9Q2 264 aaPredicted RBP11.82□□□□□ -0.52
PTCD1-205ENST00000485746 RIC8BQ9NVN3 520 aa11.82□□□□□ -0.52
PTCD1-205ENST00000485746 ZNF358Q9NW07 568 aa11.82□□□□□ -0.52
PTCD1-205ENST00000485746 PCM1Q15154 2024 aa11.82□□□□□ -0.52
PTCD1-205ENST00000485746 IGSF10Q6WRI0 2623 aa11.82□□□□□ -0.52
PTCD1-205ENST00000485746 IGHV1-45A0A0A0MS14 117 aa11.81□□□□□ -0.52
PTCD1-205ENST00000485746 LRIT2A6NDA9 550 aa11.81□□□□□ -0.52
PTCD1-205ENST00000485746 B3GALT2O43825 422 aa11.81□□□□□ -0.52
PTCD1-205ENST00000485746 FHP07954 510 aa11.81□□□□□ -0.52
PTCD1-205ENST00000485746 CYC1P08574 325 aa11.81□□□□□ -0.52
PTCD1-205ENST00000485746 COX6A1P12074 109 aa11.81□□□□□ -0.52
PTCD1-205ENST00000485746 RNH1P13489 461 aaKnown RBP11.81□□□□□ -0.52
PTCD1-205ENST00000485746 MTHFD2P13995 350 aa11.81□□□□□ -0.52
PTCD1-205ENST00000485746 TAC1P20366 129 aa11.81□□□□□ -0.52
PTCD1-205ENST00000485746 EEF1DP29692 281 aaKnown RBP11.81□□□□□ -0.52
PTCD1-205ENST00000485746 PIK3CGP48736 1102 aa11.81□□□□□ -0.52
PTCD1-205ENST00000485746 SOX8P57073 446 aa11.81□□□□□ -0.52
PTCD1-205ENST00000485746 PHEXP78562 749 aa11.81□□□□□ -0.52
PTCD1-205ENST00000485746 GTF2H2Q13888 395 aa11.81□□□□□ -0.52
PTCD1-205ENST00000485746 NSDHLQ15738 373 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms