RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 ATP5F1P24539 256 aaPredicted RBP19.82■□□□□ 0.76
SEC13-217ENST00000482647 FOXL2P58012 376 aa19.82■□□□□ 0.76
SEC13-217ENST00000482647 MAT1AQ00266 395 aaKnown RBP19.82■□□□□ 0.76
SEC13-217ENST00000482647 SLC18A2Q05940 514 aa19.82■□□□□ 0.76
SEC13-217ENST00000482647 HYAL2Q12891 473 aa19.82■□□□□ 0.76
SEC13-217ENST00000482647 CCDC153Q494R4 210 aa19.82■□□□□ 0.76
SEC13-217ENST00000482647 DEFB134Q4QY38 66 aa19.82■□□□□ 0.76
SEC13-217ENST00000482647 VWA2Q5GFL6 755 aa19.82■□□□□ 0.76
SEC13-217ENST00000482647 TOR1AIP1Q5JTV8 583 aa19.82■□□□□ 0.76
SEC13-217ENST00000482647 SHISA6Q6ZSJ9 500 aa19.82■□□□□ 0.76
SEC13-217ENST00000482647 PDSS2Q86YH6 399 aa19.82■□□□□ 0.76
SEC13-217ENST00000482647 SLC22A9Q8IVM8 553 aa19.82■□□□□ 0.76
SEC13-217ENST00000482647 LAS2Q8IYD9 372 aa19.82■□□□□ 0.76
SEC13-217ENST00000482647 C4orf33Q8N1A6 199 aa19.82■□□□□ 0.76
SEC13-217ENST00000482647 UTP15Q8TED0 518 aaKnown RBP19.82■□□□□ 0.76
SEC13-217ENST00000482647 C1QTNF3Q9BXJ4 246 aa19.82■□□□□ 0.76
SEC13-217ENST00000482647 KLHL31Q9H511 634 aa19.82■□□□□ 0.76
SEC13-217ENST00000482647 C14orf105Q9NVL8 296 aa19.82■□□□□ 0.76
SEC13-217ENST00000482647 ADGRE2Q9UHX3 823 aa19.82■□□□□ 0.76
SEC13-217ENST00000482647 IGSF10Q6WRI0 2623 aa19.81■□□□□ 0.76
SEC13-217ENST00000482647 PEX12O00623 359 aa19.81■□□□□ 0.76
SEC13-217ENST00000482647 FFAR3O14843 346 aa19.81■□□□□ 0.76
SEC13-217ENST00000482647 GPR42O15529 346 aa19.81■□□□□ 0.76
SEC13-217ENST00000482647 CLDN9O95484 217 aa19.81■□□□□ 0.76
SEC13-217ENST00000482647 PCNAP12004 261 aa19.81■□□□□ 0.76
SEC13-217ENST00000482647 ARL1P40616 181 aaPredicted RBP19.81■□□□□ 0.76
SEC13-217ENST00000482647 RAB8AP61006 207 aa19.81■□□□□ 0.76
SEC13-217ENST00000482647 HERVK_113P63132 956 aa19.81■□□□□ 0.76
SEC13-217ENST00000482647 KLC1Q07866 573 aa19.81■□□□□ 0.76
SEC13-217ENST00000482647 SYT16Q17RD7 645 aa19.81■□□□□ 0.76
SEC13-217ENST00000482647 LINC00303Q3SY05 128 aa19.81■□□□□ 0.76
SEC13-217ENST00000482647 VN1R5Q7Z5H4 357 aa19.81■□□□□ 0.76
SEC13-217ENST00000482647 TRABD2AQ86V40 505 aa19.81■□□□□ 0.76
SEC13-217ENST00000482647 LSM14AQ8ND56 463 aaKnown RBP19.81■□□□□ 0.76
SEC13-217ENST00000482647 OR7G3Q8NG95 312 aa19.81■□□□□ 0.76
SEC13-217ENST00000482647 OR51Q1Q8NH59 317 aa19.81■□□□□ 0.76
SEC13-217ENST00000482647 PPP4R1Q8TF05 950 aa19.81■□□□□ 0.76
SEC13-217ENST00000482647 REPS1Q96D71 796 aa19.81■□□□□ 0.76
SEC13-217ENST00000482647 FAR2Q96K12 515 aa19.81■□□□□ 0.76
SEC13-217ENST00000482647 ERVK-6Q9BXR3 956 aa19.81■□□□□ 0.76
SEC13-217ENST00000482647 CLK4Q9HAZ1 481 aaKnown RBP19.81■□□□□ 0.76
SEC13-217ENST00000482647 SEMA3GQ9NS98 782 aa19.81■□□□□ 0.76
SEC13-217ENST00000482647 HCN3Q9P1Z3 774 aa19.81■□□□□ 0.76
SEC13-217ENST00000482647 EMCNQ9ULC0 261 aa19.81■□□□□ 0.76
SEC13-217ENST00000482647 PCDHGA11Q9Y5H2 935 aa19.81■□□□□ 0.76
SEC13-217ENST00000482647 KCNMB2Q9Y691 235 aa19.81■□□□□ 0.76
SEC13-217ENST00000482647 OR7A17O14581 309 aa19.8■□□□□ 0.76
SEC13-217ENST00000482647 RDH16O75452 317 aa19.8■□□□□ 0.76
SEC13-217ENST00000482647 RPS17P08708 135 aaKnown RBP19.8■□□□□ 0.76
SEC13-217ENST00000482647 SMIM10L1P0DMW3 83 aa19.8■□□□□ 0.76
SEC13-217ENST00000482647 IMPDH1P20839 514 aa19.8■□□□□ 0.76
SEC13-217ENST00000482647 MMP11P24347 488 aa19.8■□□□□ 0.76
SEC13-217ENST00000482647 CCNG1P51959 295 aa19.8■□□□□ 0.76
SEC13-217ENST00000482647 PRKAA2P54646 552 aa19.8■□□□□ 0.76
SEC13-217ENST00000482647 TGM3Q08188 693 aa19.8■□□□□ 0.76
SEC13-217ENST00000482647 MRGPREQ86SM8 312 aa19.8■□□□□ 0.76
SEC13-217ENST00000482647 PRSS58Q8IYP2 241 aa19.8■□□□□ 0.76
SEC13-217ENST00000482647 IQCKQ8N0W5 287 aa19.8■□□□□ 0.76
SEC13-217ENST00000482647 L3MBTL4Q8NA19 623 aa19.8■□□□□ 0.76
SEC13-217ENST00000482647 ZNF483Q8TF39 744 aaPredicted RBP19.8■□□□□ 0.76
SEC13-217ENST00000482647 GAL3ST3Q96A11 431 aa19.8■□□□□ 0.76
SEC13-217ENST00000482647 MS4A6EQ96DS6 147 aa19.8■□□□□ 0.76
SEC13-217ENST00000482647 CCDC126Q96EE4 140 aa19.8■□□□□ 0.76
SEC13-217ENST00000482647 SMIM10Q96HG1 83 aa19.8■□□□□ 0.76
SEC13-217ENST00000482647 NSUN5Q96P11 429 aaKnown RBP19.8■□□□□ 0.76
SEC13-217ENST00000482647 CRB3Q9BUF7 120 aa19.8■□□□□ 0.76
SEC13-217ENST00000482647 NTMT1Q9BV86 223 aa19.8■□□□□ 0.76
SEC13-217ENST00000482647 REXO4Q9GZR2 422 aaKnown RBP19.8■□□□□ 0.76
SEC13-217ENST00000482647 IQCGQ9H095 443 aaKnown RBP19.8■□□□□ 0.76
SEC13-217ENST00000482647 SEMA4BQ9NPR2 832 aaPredicted RBP19.8■□□□□ 0.76
SEC13-217ENST00000482647 RNF11Q9Y3C5 154 aa19.8■□□□□ 0.76
SEC13-217ENST00000482647 FAM208BQ5VWN6 2430 aa19.79■□□□□ 0.76
SEC13-217ENST00000482647 A0A088AWK7 358 aa19.79■□□□□ 0.76
SEC13-217ENST00000482647 CCDC151A5D8V7 595 aa19.79■□□□□ 0.76
SEC13-217ENST00000482647 H0YIV9 168 aa19.79■□□□□ 0.76
SEC13-217ENST00000482647 ATXN7O15265 892 aaPredicted RBP19.79■□□□□ 0.76
SEC13-217ENST00000482647 BMP10O95393 424 aa19.79■□□□□ 0.76
SEC13-217ENST00000482647 PROCP04070 461 aa19.79■□□□□ 0.76
SEC13-217ENST00000482647 MYL2P10916 166 aa19.79■□□□□ 0.76
SEC13-217ENST00000482647 ZNF10P21506 573 aaPredicted RBP19.79■□□□□ 0.76
SEC13-217ENST00000482647 IL10P22301 178 aa19.79■□□□□ 0.76
SEC13-217ENST00000482647 HNRNPH1P31943 449 aaKnown RBP19.79■□□□□ 0.76
SEC13-217ENST00000482647 POLE2P56282 527 aa19.79■□□□□ 0.76
SEC13-217ENST00000482647 ZNF844Q08AG5 666 aa19.79■□□□□ 0.76
SEC13-217ENST00000482647 RBBP7Q16576 425 aa19.79■□□□□ 0.76
SEC13-217ENST00000482647 CPSF6Q16630 551 aaKnown RBP eCLIP19.79■□□□□ 0.76
SEC13-217ENST00000482647 KRT71Q3SY84 523 aa19.79■□□□□ 0.76
SEC13-217ENST00000482647 ADNP2Q6IQ32 1131 aa19.79■□□□□ 0.76
SEC13-217ENST00000482647 PPP1R32Q7Z5V6 425 aa19.79■□□□□ 0.76
SEC13-217ENST00000482647 LAPTM4BQ86VI4 370 aa19.79■□□□□ 0.76
SEC13-217ENST00000482647 ZC3H7AQ8IWR0 971 aaKnown RBP19.79■□□□□ 0.76
SEC13-217ENST00000482647 SRRM1Q8IYB3 904 aaKnown RBP19.79■□□□□ 0.76
SEC13-217ENST00000482647 OR52B6Q8NGF0 335 aa19.79■□□□□ 0.76
SEC13-217ENST00000482647 RDH11Q8TC12 318 aa19.79■□□□□ 0.76
SEC13-217ENST00000482647 ZNF473Q8WTR7 871 aaKnown RBP19.79■□□□□ 0.76
SEC13-217ENST00000482647 VPS50Q96JG6 964 aa19.79■□□□□ 0.76
SEC13-217ENST00000482647 MAGEB10Q96LZ2 347 aaPredicted RBP19.79■□□□□ 0.76
SEC13-217ENST00000482647 ZBTB26Q9HCK0 441 aa19.79■□□□□ 0.76
SEC13-217ENST00000482647 C3orf18Q9UK00 162 aa19.79■□□□□ 0.76
SEC13-217ENST00000482647 TSC22D4Q9Y3Q8 395 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms