RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 CLEC4AQ9UMR7 237 aa12.25□□□□□ -0.45
VPS52-218ENST00000482399 SSR3Q9UNL2 185 aa12.25□□□□□ -0.45
VPS52-218ENST00000482399 E7EQ34 232 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 KMOO15229 486 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 IGSF6O95976 241 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 PTTG1O95997 202 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 PTGER1P34995 402 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 BDKRB1P46663 353 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 RPS13P62277 151 aaKnown RBP12.24□□□□□ -0.45
VPS52-218ENST00000482399 COX20Q5RI15 118 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 LDLRAD1Q5T700 205 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 NCEH1Q6PIU2 408 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 PLET1Q6UQ28 207 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 PAMR1Q6UXH9 720 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 TMEM173Q86WV6 379 aaPredicted RBP12.24□□□□□ -0.45
VPS52-218ENST00000482399 KRT73Q86Y46 540 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 IQCF1Q8N6M8 205 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 TCEANCQ8N8B7 351 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 WFDC5Q8TCV5 224 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 CMTM7Q96FZ5 175 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 C1QTNF3Q9BXJ4 246 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 GPBP1L1Q9HC44 474 aaPredicted RBP12.24□□□□□ -0.45
VPS52-218ENST00000482399 RANGRFQ9HD47 186 aaPredicted RBP12.24□□□□□ -0.45
VPS52-218ENST00000482399 TRAV19A0A0A6YYK7 116 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 TRBC2A0A5B9 178 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 NPIPB15A6NHN6 443 aaPredicted RBP12.24□□□□□ -0.45
VPS52-218ENST00000482399 FAM25AB3EWG3 89 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 FAM25CB3EWG5 89 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 FAM25GB3EWG6 89 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 SLITRK5O94991 958 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 OAZ2O95190 189 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 CDK1P06493 297 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 CCNYL3P0C7X3 344 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 HNRNPA0Q13151 305 aaKnown RBP12.24□□□□□ -0.45
VPS52-218ENST00000482399 SLAMF1Q13291 335 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 GCNT6Q5T4J0 391 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 SPRYD7Q5W111 196 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 SHFQ7M4L6 423 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 DEFB128Q7Z7B8 93 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 TRIM69Q86WT6 500 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 GHDCQ8N2G8 530 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 UPF1Q92900 1129 aaKnown RBP eCLIP12.24□□□□□ -0.45
VPS52-218ENST00000482399 CIDECQ96AQ7 238 aaPredicted RBP12.24□□□□□ -0.45
VPS52-218ENST00000482399 PPCDCQ96CD2 204 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 PSD2Q9BQI7 771 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 DOHHQ9BU89 302 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 CLEC2DQ9UHP7 191 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 OSGIN1Q9UJX0 560 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 SPIN1Q9Y657 262 aaPredicted RBP12.24□□□□□ -0.45
VPS52-218ENST00000482399 SBF1O95248 1867 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 A0A1W2PQ09 198 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 GSAPA4D1B5 854 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 CLDN24A6NM45 220 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 DSCR3O14972 297 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 LZTS3O60299 673 aaPredicted RBP12.24□□□□□ -0.45
VPS52-218ENST00000482399 HLA-EP13747 358 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 FLT3LGP49771 235 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 MRPL28Q13084 256 aaKnown RBP12.24□□□□□ -0.45
VPS52-218ENST00000482399 DOC2AQ14183 400 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 C5orf22Q49AR2 442 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 C22orf42Q6IC83 251 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 SLC46A3Q7Z3Q1 461 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 TRMT11Q7Z4G4 463 aaKnown RBP12.24□□□□□ -0.45
VPS52-218ENST00000482399 NPAS3Q8IXF0 933 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 DBF4BQ8NFT6 615 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 LILRB4Q8NHJ6 448 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 EFHD2Q96C19 240 aaPredicted RBP12.24□□□□□ -0.45
VPS52-218ENST00000482399 OMA1Q96E52 524 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 HDHD2Q9H0R4 259 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 SMG9Q9H0W8 520 aaKnown RBP12.24□□□□□ -0.45
VPS52-218ENST00000482399 SMURF1Q9HCE7 757 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 PCDH10Q9P2E7 1040 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 PSORS1C1Q9UIG5 152 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 MKLN1Q9UL63 735 aa12.24□□□□□ -0.45
VPS52-218ENST00000482399 ZNF646O15015 1829 aaPredicted RBP12.23□□□□□ -0.45
VPS52-218ENST00000482399 GRXCR2A6NFK2 248 aa12.23□□□□□ -0.45
VPS52-218ENST00000482399 OR6C75A6NL08 312 aa12.23□□□□□ -0.45
VPS52-218ENST00000482399 GABRR3A8MPY1 467 aa12.23□□□□□ -0.45
VPS52-218ENST00000482399 TLX2O43763 284 aaPredicted RBP12.23□□□□□ -0.45
VPS52-218ENST00000482399 STATHP02808 62 aa12.23□□□□□ -0.45
VPS52-218ENST00000482399 AMD1P17707 334 aa12.23□□□□□ -0.45
VPS52-218ENST00000482399 TGFBR2P37173 567 aa12.23□□□□□ -0.45
VPS52-218ENST00000482399 SLC11A1P49279 550 aa12.23□□□□□ -0.45
VPS52-218ENST00000482399 CBX2Q14781 532 aaPredicted RBP12.23□□□□□ -0.45
VPS52-218ENST00000482399 PTGES3Q15185 160 aaKnown RBP12.23□□□□□ -0.45
VPS52-218ENST00000482399 QPRTQ15274 297 aa12.23□□□□□ -0.45
VPS52-218ENST00000482399 PPP2R2DQ66LE6 453 aa12.23□□□□□ -0.45
VPS52-218ENST00000482399 CBLL1Q75N03 491 aa12.23□□□□□ -0.45
VPS52-218ENST00000482399 RRM2BQ7LG56 351 aa12.23□□□□□ -0.45
VPS52-218ENST00000482399 MRPL10Q7Z7H8 261 aaKnown RBP12.23□□□□□ -0.45
VPS52-218ENST00000482399 TXNDC15Q96J42 360 aa12.23□□□□□ -0.45
VPS52-218ENST00000482399 FOPNLQ96NB1 174 aa12.23□□□□□ -0.45
VPS52-218ENST00000482399 ARHGAP39Q9C0H5 1083 aa12.23□□□□□ -0.45
VPS52-218ENST00000482399 P2RY12Q9H244 342 aa12.23□□□□□ -0.45
VPS52-218ENST00000482399 C5AR2Q9P296 337 aa12.23□□□□□ -0.45
VPS52-218ENST00000482399 GPSM3Q9Y4H4 160 aa12.23□□□□□ -0.45
VPS52-218ENST00000482399 PCDHB11Q9Y5F2 797 aa12.23□□□□□ -0.45
VPS52-218ENST00000482399 FADS2P1A8MWK0 482 aa12.23□□□□□ -0.45
VPS52-218ENST00000482399 PLK4O00444 970 aa12.23□□□□□ -0.45
VPS52-218ENST00000482399 ARHGAP33O14559 1287 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms