RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 TXNDC9O14530 226 aa8.5□□□□□ -1.05
HLA-B-253ENST00000481849 MPC1LP0DKB6 136 aa8.5□□□□□ -1.05
HLA-B-253ENST00000481849 C8orf89P0DMQ9 161 aa8.5□□□□□ -1.05
HLA-B-253ENST00000481849 MLNP12872 115 aa8.5□□□□□ -1.05
HLA-B-253ENST00000481849 IL1RNP18510 177 aa8.5□□□□□ -1.05
HLA-B-253ENST00000481849 IMPA1P29218 277 aa8.5□□□□□ -1.05
HLA-B-253ENST00000481849 COILP38432 576 aaPredicted RBP8.5□□□□□ -1.05
HLA-B-253ENST00000481849 SKIV2L2P42285 1042 aaKnown RBP8.5□□□□□ -1.05
HLA-B-253ENST00000481849 MAGEA6P43360 314 aa8.5□□□□□ -1.05
HLA-B-253ENST00000481849 TBPL1P62380 186 aa8.5□□□□□ -1.05
HLA-B-253ENST00000481849 PMP22Q01453 160 aa8.5□□□□□ -1.05
HLA-B-253ENST00000481849 ZNF33BQ06732 778 aa8.5□□□□□ -1.05
HLA-B-253ENST00000481849 ZRSR2Q15696 482 aaKnown RBP8.5□□□□□ -1.05
HLA-B-253ENST00000481849 NDUFA9Q16795 377 aa8.5□□□□□ -1.05
HLA-B-253ENST00000481849 LONRF1Q17RB8 773 aa8.5□□□□□ -1.05
HLA-B-253ENST00000481849 HSP90AA5PQ58FG0 334 aa8.5□□□□□ -1.05
HLA-B-253ENST00000481849 ABHD17BQ5VST6 288 aa8.5□□□□□ -1.05
HLA-B-253ENST00000481849 GARNL3Q5VVW2 1013 aa8.5□□□□□ -1.05
HLA-B-253ENST00000481849 GFRALQ6UXV0 394 aa8.5□□□□□ -1.05
HLA-B-253ENST00000481849 NBEAL2Q6ZNJ1 2754 aa8.5□□□□□ -1.05
HLA-B-253ENST00000481849 LANCL3Q6ZV70 420 aa8.5□□□□□ -1.05
HLA-B-253ENST00000481849 VN1R4Q7Z5H5 301 aa8.5□□□□□ -1.05
HLA-B-253ENST00000481849 LRRC56Q8IYG6 542 aaPredicted RBP8.5□□□□□ -1.05
HLA-B-253ENST00000481849 ARHGEF39Q8N4T4 335 aa8.5□□□□□ -1.05
HLA-B-253ENST00000481849 CD200R1Q8TD46 325 aa8.5□□□□□ -1.05
HLA-B-253ENST00000481849 KCNJ9Q92806 393 aa8.5□□□□□ -1.05
HLA-B-253ENST00000481849 MVB12AQ96EY5 273 aa8.5□□□□□ -1.05
HLA-B-253ENST00000481849 EBNA1BP2Q99848 306 aaKnown RBP8.5□□□□□ -1.05
HLA-B-253ENST00000481849 TGIF2Q9GZN2 237 aa8.5□□□□□ -1.05
HLA-B-253ENST00000481849 VN1R1Q9GZP7 353 aa8.5□□□□□ -1.05
HLA-B-253ENST00000481849 ZNF700Q9H0M5 742 aa8.5□□□□□ -1.05
HLA-B-253ENST00000481849 ATG10Q9H0Y0 220 aa8.5□□□□□ -1.05
HLA-B-253ENST00000481849 XAB2Q9HCS7 855 aaKnown RBP8.5□□□□□ -1.05
HLA-B-253ENST00000481849 CCDC177Q9NQR7 707 aaPredicted RBP8.5□□□□□ -1.05
HLA-B-253ENST00000481849 STMN3Q9NZ72 180 aa8.5□□□□□ -1.05
HLA-B-253ENST00000481849 TRMT6Q9UJA5 497 aaKnown RBP8.5□□□□□ -1.05
HLA-B-253ENST00000481849 FBXO5Q9UKT4 447 aa8.5□□□□□ -1.05
HLA-B-253ENST00000481849 SH2B3Q9UQQ2 575 aa8.5□□□□□ -1.05
HLA-B-253ENST00000481849 PPP2R2CQ9Y2T4 447 aa8.5□□□□□ -1.05
HLA-B-253ENST00000481849 DHRS7Q9Y394 339 aa8.5□□□□□ -1.05
HLA-B-253ENST00000481849 SHANK1Q9Y566 2161 aa8.49□□□□□ -1.05
HLA-B-253ENST00000481849 LOC102723996A0A087X1L8 192 aa8.49□□□□□ -1.05
HLA-B-253ENST00000481849 TRGV8A0A0C4DH27 118 aa8.49□□□□□ -1.05
HLA-B-253ENST00000481849 MAGEB16A2A368 324 aa8.49□□□□□ -1.05
HLA-B-253ENST00000481849 ZNF860A6NHJ4 632 aa8.49□□□□□ -1.05
HLA-B-253ENST00000481849 A6NHS1 94 aa8.49□□□□□ -1.05
HLA-B-253ENST00000481849 PRSS44E7EML9 344 aa8.49□□□□□ -1.05
HLA-B-253ENST00000481849 PCDH17O14917 1159 aa8.49□□□□□ -1.05
HLA-B-253ENST00000481849 RDH16O75452 317 aa8.49□□□□□ -1.05
HLA-B-253ENST00000481849 BANF1O75531 89 aa8.49□□□□□ -1.05
HLA-B-253ENST00000481849 CDC123O75794 336 aaPredicted RBP8.49□□□□□ -1.05
HLA-B-253ENST00000481849 UNC5CO95185 931 aa8.49□□□□□ -1.05
HLA-B-253ENST00000481849 CDH1P12830 882 aa8.49□□□□□ -1.05
HLA-B-253ENST00000481849 ENO3P13929 434 aaPredicted RBP8.49□□□□□ -1.05
HLA-B-253ENST00000481849 FDXRP22570 491 aa8.49□□□□□ -1.05
HLA-B-253ENST00000481849 MST1P26927 711 aa8.49□□□□□ -1.05
HLA-B-253ENST00000481849 BCL6P41182 706 aa8.49□□□□□ -1.05
HLA-B-253ENST00000481849 XCR1P46094 333 aa8.49□□□□□ -1.05
HLA-B-253ENST00000481849 CCZ1BP86790 482 aa8.49□□□□□ -1.05
HLA-B-253ENST00000481849 CCZ1P86791 482 aaPredicted RBP8.49□□□□□ -1.05
HLA-B-253ENST00000481849 MEF2AQ02078 507 aaPredicted RBP8.49□□□□□ -1.05
HLA-B-253ENST00000481849 BTBD16Q32M84 506 aa8.49□□□□□ -1.05
HLA-B-253ENST00000481849 RPUSD3Q6P087 351 aaKnown RBP8.49□□□□□ -1.05
HLA-B-253ENST00000481849 CCDC137Q6PK04 289 aaKnown RBP8.49□□□□□ -1.05
HLA-B-253ENST00000481849 TMEM205Q6UW68 189 aa8.49□□□□□ -1.05
HLA-B-253ENST00000481849 ZNF662Q6ZS27 426 aa8.49□□□□□ -1.05
HLA-B-253ENST00000481849 LRRC8AQ8IWT6 810 aa8.49□□□□□ -1.05
HLA-B-253ENST00000481849 KCT2Q8NC54 265 aa8.49□□□□□ -1.05
HLA-B-253ENST00000481849 FBXO15Q8NCQ5 510 aaPredicted RBP8.49□□□□□ -1.05
HLA-B-253ENST00000481849 SUN3Q8TAQ9 357 aa8.49□□□□□ -1.05
HLA-B-253ENST00000481849 MCOLN3Q8TDD5 553 aa8.49□□□□□ -1.05
HLA-B-253ENST00000481849 EEF1AKMT1Q8WVE0 214 aa8.49□□□□□ -1.05
HLA-B-253ENST00000481849 NR4A3Q92570 626 aa8.49□□□□□ -1.05
HLA-B-253ENST00000481849 HAS2Q92819 552 aa8.49□□□□□ -1.05
HLA-B-253ENST00000481849 MOCOSQ96EN8 888 aa8.49□□□□□ -1.05
HLA-B-253ENST00000481849 SIGLEC10Q96LC7 697 aa8.49□□□□□ -1.05
HLA-B-253ENST00000481849 CCDC138Q96M89 665 aa8.49□□□□□ -1.05
HLA-B-253ENST00000481849 CYTH2Q99418 400 aa8.49□□□□□ -1.05
HLA-B-253ENST00000481849 AARSD1Q9BTE6 412 aaKnown RBP8.49□□□□□ -1.05
HLA-B-253ENST00000481849 TUBB6Q9BUF5 446 aa8.49□□□□□ -1.05
HLA-B-253ENST00000481849 TMEM184CQ9NVA4 438 aa8.49□□□□□ -1.05
HLA-B-253ENST00000481849 ANKRD10Q9NXR5 420 aa8.49□□□□□ -1.05
HLA-B-253ENST00000481849 PDE10AQ9Y233 779 aa8.49□□□□□ -1.05
HLA-B-253ENST00000481849 A0A1B0GUH1 482 aa8.48□□□□□ -1.05
HLA-B-253ENST00000481849 A0A1W2PQ72 361 aa8.48□□□□□ -1.05
HLA-B-253ENST00000481849 OR5H15A6NDH6 313 aa8.48□□□□□ -1.05
HLA-B-253ENST00000481849 PRAMEF2O60811 474 aa8.48□□□□□ -1.05
HLA-B-253ENST00000481849 WISP2O76076 250 aa8.48□□□□□ -1.05
HLA-B-253ENST00000481849 RASAL1O95294 804 aa8.48□□□□□ -1.05
HLA-B-253ENST00000481849 NSA2O95478 260 aaKnown RBP8.48□□□□□ -1.05
HLA-B-253ENST00000481849 WNT11O96014 354 aa8.48□□□□□ -1.05
HLA-B-253ENST00000481849 B3GALT4O96024 378 aa8.48□□□□□ -1.05
HLA-B-253ENST00000481849 SERPIND1P05546 499 aa8.48□□□□□ -1.05
HLA-B-253ENST00000481849 STSP08842 583 aa8.48□□□□□ -1.05
HLA-B-253ENST00000481849 TDGF1P3P51864 188 aa8.48□□□□□ -1.05
HLA-B-253ENST00000481849 PGGT1BP53609 377 aa8.48□□□□□ -1.05
HLA-B-253ENST00000481849 CDKN2DP55273 166 aa8.48□□□□□ -1.05
HLA-B-253ENST00000481849 RPS15AP62244 130 aaKnown RBP8.48□□□□□ -1.05
HLA-B-253ENST00000481849 CSNK1G2P78368 415 aa8.48□□□□□ -1.05
HLA-B-253ENST00000481849 NAE1Q13564 534 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms