RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 NOXRED1Q6NXP6 359 aa9.7□□□□□ -0.86
USP39-215ENST00000481409 SCIMPQ6UWF3 145 aa9.7□□□□□ -0.86
USP39-215ENST00000481409 GLRX5Q86SX6 157 aa9.7□□□□□ -0.86
USP39-215ENST00000481409 TRIM73Q86UV7 250 aa9.7□□□□□ -0.86
USP39-215ENST00000481409 NUDT13Q86X67 352 aa9.7□□□□□ -0.86
USP39-215ENST00000481409 ZCCHC7Q8N3Z6 543 aaKnown RBP9.7□□□□□ -0.86
USP39-215ENST00000481409 FITM2Q8N6M3 262 aa9.7□□□□□ -0.86
USP39-215ENST00000481409 Q8N9G6 341 aaPredicted RBP9.7□□□□□ -0.86
USP39-215ENST00000481409 C7orf57Q8NEG2 295 aa9.7□□□□□ -0.86
USP39-215ENST00000481409 OR2I1PQ8NGU4 316 aa9.7□□□□□ -0.86
USP39-215ENST00000481409 MTERF3Q96E29 417 aa9.7□□□□□ -0.86
USP39-215ENST00000481409 ZNF764Q96H86 408 aaPredicted RBP9.7□□□□□ -0.86
USP39-215ENST00000481409 TMEM74Q96NL1 305 aa9.7□□□□□ -0.86
USP39-215ENST00000481409 GFM1Q96RP9 751 aaKnown RBP9.7□□□□□ -0.86
USP39-215ENST00000481409 ZBTB18Q99592 522 aa9.7□□□□□ -0.86
USP39-215ENST00000481409 ZMYND15Q9H091 742 aa9.7□□□□□ -0.86
USP39-215ENST00000481409 FANCEQ9HB96 536 aa9.7□□□□□ -0.86
USP39-215ENST00000481409 PTGDR2Q9Y5Y4 395 aa9.7□□□□□ -0.86
USP39-215ENST00000481409 COPG1Q9Y678 874 aaKnown RBP9.7□□□□□ -0.86
USP39-215ENST00000481409 IGHV5-51A0A0C4DH38 117 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 A0A0J9YVX5 310 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 FITM1A5D6W6 292 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 H0YGG7 62 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 PCDH7O60245 1069 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 CBFA2T3O75081 653 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 SLC22A3O75751 556 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 KIAA0754O94854 1291 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 IL6P05231 212 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 ALDOCP09972 364 aaKnown RBP9.69□□□□□ -0.86
USP39-215ENST00000481409 BCKDHAP12694 445 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 GPX3P22352 226 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 CALB2P22676 271 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 TGM1P22735 817 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 CSF2RBP32927 897 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 GABRA4P48169 554 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 GFERP55789 205 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 ARF3P61204 181 aaPredicted RBP9.69□□□□□ -0.86
USP39-215ENST00000481409 CCL7P80098 99 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 HYAL2Q12891 473 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 KLF10Q13118 480 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 FAM53BQ14153 422 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 SPIDRQ14159 915 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 GRM7Q14831 915 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 PRTGQ2VWP7 1150 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 FAM214AQ32MH5 1076 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 AMZ1Q400G9 498 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 TLDC1Q6P9B6 456 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 CYP20A1Q6UW02 462 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 FAM92BQ6ZTR7 304 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 MSANTD1Q6ZTZ1 278 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 CCDC121Q6ZUS5 278 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 COMMD6Q7Z4G1 85 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 ARHGAP22Q7Z5H3 698 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 VN1R4Q7Z5H5 301 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 R3HCC1LQ7Z5L2 792 aaKnown RBP9.69□□□□□ -0.86
USP39-215ENST00000481409 MCATQ8IVS2 390 aaKnown RBP9.69□□□□□ -0.86
USP39-215ENST00000481409 DNAJB8Q8NHS0 232 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 ADAMTS18Q8TE60 1221 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 N4BP2L2Q92802 583 aaPredicted RBP9.69□□□□□ -0.86
USP39-215ENST00000481409 TESCQ96BS2 214 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 MS4A6EQ96DS6 147 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 MVB12AQ96EY5 273 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 APIPQ96GX9 242 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 CATSPER2Q96P56 530 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 HBEGFQ99075 208 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 PRPF18Q99633 342 aaKnown RBP9.69□□□□□ -0.86
USP39-215ENST00000481409 SLC25A23Q9BV35 468 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 NPLQ9BXD5 320 aaPredicted RBP9.69□□□□□ -0.86
USP39-215ENST00000481409 DPY30Q9C005 99 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 MYNNQ9NPC7 610 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 TXLNGQ9NUQ3 528 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 SOHLH2Q9NX45 425 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 LYARQ9NX58 379 aaKnown RBP9.69□□□□□ -0.86
USP39-215ENST00000481409 MS4A12Q9NXJ0 267 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 NDE1Q9NXR1 346 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 SERTAD3Q9UJW9 196 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 BTBD3Q9Y2F9 522 aa9.69□□□□□ -0.86
USP39-215ENST00000481409 SNRNP200O75643 2136 aaKnown RBP9.68□□□□□ -0.86
USP39-215ENST00000481409 MDC1Q14676 2089 aaKnown RBP9.68□□□□□ -0.86
USP39-215ENST00000481409 A0A1W2PQM1 296 aa9.68□□□□□ -0.86
USP39-215ENST00000481409 FAM234BA2RU67 622 aa9.68□□□□□ -0.86
USP39-215ENST00000481409 BLACEA4D250 179 aa9.68□□□□□ -0.86
USP39-215ENST00000481409 D6RAR5 112 aa9.68□□□□□ -0.86
USP39-215ENST00000481409 PLPP1O14494 284 aa9.68□□□□□ -0.86
USP39-215ENST00000481409 TBX19O60806 448 aa9.68□□□□□ -0.86
USP39-215ENST00000481409 ETHE1O95571 254 aa9.68□□□□□ -0.86
USP39-215ENST00000481409 TBX6O95947 436 aaPredicted RBP9.68□□□□□ -0.86
USP39-215ENST00000481409 NPPAP01160 153 aa9.68□□□□□ -0.86
USP39-215ENST00000481409 ANXA4P09525 319 aaPredicted RBP9.68□□□□□ -0.86
USP39-215ENST00000481409 SMIM10L1P0DMW3 83 aa9.68□□□□□ -0.86
USP39-215ENST00000481409 G6PDP11413 515 aa9.68□□□□□ -0.86
USP39-215ENST00000481409 SDC1P18827 310 aa9.68□□□□□ -0.86
USP39-215ENST00000481409 PIK3R1P27986 724 aa9.68□□□□□ -0.86
USP39-215ENST00000481409 CCKBRP32239 447 aa9.68□□□□□ -0.86
USP39-215ENST00000481409 BSGP35613 385 aa9.68□□□□□ -0.86
USP39-215ENST00000481409 ARSFP54793 590 aa9.68□□□□□ -0.86
USP39-215ENST00000481409 MTTPP55157 894 aa9.68□□□□□ -0.86
USP39-215ENST00000481409 KCNK10P57789 538 aa9.68□□□□□ -0.86
USP39-215ENST00000481409 PPP1CAP62136 330 aa9.68□□□□□ -0.86
USP39-215ENST00000481409 CFHR1Q03591 330 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms